RNA–Protein interactions for RNA: ENST00000484562.5

PATJ-207, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene PATJ, Length 5,448 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-207ENST00000484562 DCAF8L2P0C7V8 631 aa18.42■□□□□ 0.54
PATJ-207ENST00000484562 PELP1Q8IZL8 1130 aaKnown RBP17.68■□□□□ 0.42
PATJ-207ENST00000484562 SUPT5HO00267 1087 aaKnown RBP17.53■□□□□ 0.4
PATJ-207ENST00000484562 APLP2Q06481 763 aa17.15■□□□□ 0.34
PATJ-207ENST00000484562 SHROOM4Q9ULL8 1493 aa16.98■□□□□ 0.31
PATJ-207ENST00000484562 FAM9AQ8IZU1 332 aaPredicted RBP16.98■□□□□ 0.31
PATJ-207ENST00000484562 EHMT2Q96KQ7 1210 aa16.98■□□□□ 0.31
PATJ-207ENST00000484562 NISCHQ9Y2I1 1504 aa16.95■□□□□ 0.3
PATJ-207ENST00000484562 CCER1Q8TC90 406 aaPredicted RBP16.87■□□□□ 0.29
PATJ-207ENST00000484562 ERICH6Q7L0X2 663 aa16.83■□□□□ 0.28
PATJ-207ENST00000484562 CENPBP07199 599 aaPredicted RBP16.77■□□□□ 0.27
PATJ-207ENST00000484562 ZEB1P37275 1124 aaPredicted RBP16.68■□□□□ 0.26
PATJ-207ENST00000484562 PCGF6Q9BYE7 350 aa16.55■□□□□ 0.24
PATJ-207ENST00000484562 MYT1Q01538 1121 aa16.53■□□□□ 0.24
PATJ-207ENST00000484562 TTBK1Q5TCY1 1321 aaPredicted RBP16.48■□□□□ 0.23
PATJ-207ENST00000484562 NEFLP07196 543 aa16.47■□□□□ 0.23
PATJ-207ENST00000484562 TRIM41Q8WV44 630 aa16.32■□□□□ 0.2
PATJ-207ENST00000484562 ATP1B4Q9UN42 357 aaPredicted RBP16.3■□□□□ 0.2
PATJ-207ENST00000484562 RANGAP1P46060 587 aaPredicted RBP16.28■□□□□ 0.2
PATJ-207ENST00000484562 UBTFP17480 764 aaKnown RBP16.21■□□□□ 0.19
PATJ-207ENST00000484562 YTHDC1Q96MU7 727 aaKnown RBP16.1■□□□□ 0.17
PATJ-207ENST00000484562 DAXXQ9UER7 740 aaPredicted RBP16.1■□□□□ 0.17
PATJ-207ENST00000484562 TRIM26Q12899 539 aaPredicted RBP15.9■□□□□ 0.14
PATJ-207ENST00000484562 MYT1LQ9UL68 1186 aa15.78■□□□□ 0.12
PATJ-207ENST00000484562 POLR3GLQ9BT43 218 aa15.77■□□□□ 0.11
PATJ-207ENST00000484562 HRCP23327 699 aa15.73■□□□□ 0.11
PATJ-207ENST00000484562 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.72■□□□□ 0.11
PATJ-207ENST00000484562 HNRNPUL2Q1KMD3 747 aaKnown RBP15.72■□□□□ 0.11
PATJ-207ENST00000484562 PPARGC1BQ86YN6 1023 aaKnown RBP15.71■□□□□ 0.11
PATJ-207ENST00000484562 RTL5Q5HYW3 569 aaPredicted RBP15.7■□□□□ 0.1
PATJ-207ENST00000484562 ITGAEP38570 1179 aa15.68■□□□□ 0.1
PATJ-207ENST00000484562 ZNF316A6NFI3 1004 aaPredicted RBP15.67■□□□□ 0.1
PATJ-207ENST00000484562 CLSPNQ9HAW4 1339 aa15.6■□□□□ 0.09
PATJ-207ENST00000484562 SLC4A1APQ9BWU0 796 aaKnown RBP15.53■□□□□ 0.08
PATJ-207ENST00000484562 CNGB1Q14028 1251 aaPredicted RBP15.48■□□□□ 0.07
PATJ-207ENST00000484562 DIEXFQ68CQ4 756 aaKnown RBP15.43■□□□□ 0.06
PATJ-207ENST00000484562 ZBTB47Q9UFB7 747 aaPredicted RBP15.38■□□□□ 0.05
PATJ-207ENST00000484562 CHIC1Q5VXU3 224 aa15.36■□□□□ 0.05
PATJ-207ENST00000484562 LOC105371045A0A1W2PR82 267 aa15.35■□□□□ 0.05
PATJ-207ENST00000484562 FAM50AQ14320 339 aaKnown RBP15.31■□□□□ 0.04
PATJ-207ENST00000484562 TRIM52Q96A61 297 aa15.31■□□□□ 0.04
PATJ-207ENST00000484562 CDK11AQ9UQ88 783 aaPredicted RBP15.3■□□□□ 0.04
PATJ-207ENST00000484562 ANP32CO43423 234 aa15.27■□□□□ 0.04
PATJ-207ENST00000484562 NEUROD1Q13562 356 aa15.18■□□□□ 0.02
PATJ-207ENST00000484562 NEFMP07197 916 aa15.17■□□□□ 0.02
PATJ-207ENST00000484562 CANXP27824 592 aaKnown RBP15.16■□□□□ 0.02
PATJ-207ENST00000484562 BCANQ96GW7 911 aa15.14■□□□□ 0.01
PATJ-207ENST00000484562 GTF3C3Q9Y5Q9 886 aa15.11■□□□□ 0.01
PATJ-207ENST00000484562 ZNF326Q5BKZ1 582 aaKnown RBP15.1■□□□□ 0.01
PATJ-207ENST00000484562 ANP32AP39687 249 aaKnown RBP15.09■□□□□ 0.01
PATJ-207ENST00000484562 ANP32BQ92688 251 aaKnown RBP15.02■□□□□ -0
PATJ-207ENST00000484562 SLC24A1O60721 1099 aa15.02■□□□□ -0
PATJ-207ENST00000484562 BCL11AQ9H165 835 aa14.92□□□□□ -0.02
PATJ-207ENST00000484562 UPF2Q9HAU5 1272 aaKnown RBP14.9□□□□□ -0.02
PATJ-207ENST00000484562 ACIN1Q9UKV3 1341 aaKnown RBP14.89□□□□□ -0.03
PATJ-207ENST00000484562 HSP90AA1P07900 732 aaKnown RBP14.88□□□□□ -0.03
PATJ-207ENST00000484562 FBLN2P98095 1184 aa14.85□□□□□ -0.03
PATJ-207ENST00000484562 NPM2Q86SE8 214 aaKnown RBP14.85□□□□□ -0.03
PATJ-207ENST00000484562 GLIPR1L2Q4G1C9 344 aa14.85□□□□□ -0.03
PATJ-207ENST00000484562 EIF5BO60841 1220 aaKnown RBP14.79□□□□□ -0.04
PATJ-207ENST00000484562 ESF1Q9H501 851 aaKnown RBP14.77□□□□□ -0.04
PATJ-207ENST00000484562 PABPN1Q86U42 306 aaKnown RBP eCLIP14.76□□□□□ -0.05
PATJ-207ENST00000484562 TONSLQ96HA7 1378 aa14.76□□□□□ -0.05
PATJ-207ENST00000484562 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.75□□□□□ -0.05
PATJ-207ENST00000484562 CSRNP3Q8WYN3 585 aa14.75□□□□□ -0.05
PATJ-207ENST00000484562 ZNF777Q9ULD5 760 aaPredicted RBP14.74□□□□□ -0.05
PATJ-207ENST00000484562 FKBP8Q14318 412 aa14.73□□□□□ -0.05
PATJ-207ENST00000484562 HNRNPUQ00839 825 aaKnown RBP eCLIP14.69□□□□□ -0.06
PATJ-207ENST00000484562 P3H3Q8IVL6 736 aa14.69□□□□□ -0.06
PATJ-207ENST00000484562 STAG3Q9UJ98 1225 aa14.68□□□□□ -0.06
PATJ-207ENST00000484562 ABCC9O60706 1549 aa14.65□□□□□ -0.06
PATJ-207ENST00000484562 CCDC136Q96JN2 1154 aa14.65□□□□□ -0.06
PATJ-207ENST00000484562 ARID3CA6NKF2 412 aa14.64□□□□□ -0.07
PATJ-207ENST00000484562 CHGAP10645 457 aaKnown RBP14.63□□□□□ -0.07
PATJ-207ENST00000484562 FAM9BQ8IZU0 186 aa14.62□□□□□ -0.07
PATJ-207ENST00000484562 TMC1Q8TDI8 760 aa14.62□□□□□ -0.07
PATJ-207ENST00000484562 WDR43Q15061 677 aaKnown RBP eCLIP14.61□□□□□ -0.07
PATJ-207ENST00000484562 CDK11BP21127 795 aaKnown RBP14.6□□□□□ -0.07
PATJ-207ENST00000484562 MYH16Q9H6N6 1097 aa14.58□□□□□ -0.08
PATJ-207ENST00000484562 ANP32EQ9BTT0 268 aa14.57□□□□□ -0.08
PATJ-207ENST00000484562 NPM1P06748 294 aaKnown RBP eCLIP14.56□□□□□ -0.08
PATJ-207ENST00000484562 DDX10Q13206 875 aaKnown RBP14.56□□□□□ -0.08
PATJ-207ENST00000484562 DDRGK1Q96HY6 314 aa14.52□□□□□ -0.09
PATJ-207ENST00000484562 BECN1Q14457 450 aa14.51□□□□□ -0.09
PATJ-207ENST00000484562 NCLP19338 710 aaKnown RBP14.51□□□□□ -0.09
PATJ-207ENST00000484562 MRS2Q9HD23 443 aa14.5□□□□□ -0.09
PATJ-207ENST00000484562 SALL2Q9Y467 1007 aaPredicted RBP14.5□□□□□ -0.09
PATJ-207ENST00000484562 NBR1Q14596 966 aa14.49□□□□□ -0.09
PATJ-207ENST00000484562 GOLGA6L22H0YM25 854 aa14.47□□□□□ -0.09
PATJ-207ENST00000484562 TSPY4P0CV99 314 aa14.47□□□□□ -0.09
PATJ-207ENST00000484562 TSPY10P0CW01 314 aa14.47□□□□□ -0.09
PATJ-207ENST00000484562 TRIM44Q96DX7 344 aaPredicted RBP14.45□□□□□ -0.1
PATJ-207ENST00000484562 DCAF1Q9Y4B6 1507 aa14.45□□□□□ -0.1
PATJ-207ENST00000484562 ARXQ96QS3 562 aa14.43□□□□□ -0.1
PATJ-207ENST00000484562 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.42□□□□□ -0.13e-6■□□□□ 11.3
PATJ-207ENST00000484562 TNNT2P45379 298 aaPredicted RBP14.4□□□□□ -0.11
PATJ-207ENST00000484562 EIF4G2P78344 907 aaKnown RBP eCLIP14.39□□□□□ -0.11
PATJ-207ENST00000484562 CHIC2Q9UKJ5 165 aa14.39□□□□□ -0.11
PATJ-207ENST00000484562 ZRSR1Q15695 479 aaKnown RBP14.37□□□□□ -0.11
PATJ-207ENST00000484562 MTUS2Q5JR59 1369 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms