RNA–Protein interactions for RNA: ENST00000316485.11

PATJ-202, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 5 BASIC

Gene PATJ, Length 3,657 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-202ENST00000316485 NISCHQ9Y2I1 1504 aa9.88□□□□□ -0.83
PATJ-202ENST00000316485 AEBP2Q6ZN18 517 aaPredicted RBP9.48□□□□□ -0.89
PATJ-202ENST00000316485 CHIC1Q5VXU3 224 aa8.82□□□□□ -1
PATJ-202ENST00000316485 CCDC180Q9P1Z9 1646 aa8.54□□□□□ -1.04
PATJ-202ENST00000316485 DCAF8L2P0C7V8 631 aa8.41□□□□□ -1.06
PATJ-202ENST00000316485 ZCCHC6Q5VYS8 1495 aaKnown RBP8.28□□□□□ -1.08
PATJ-202ENST00000316485 SHROOM4Q9ULL8 1493 aa8.27□□□□□ -1.09
PATJ-202ENST00000316485 ABCC9O60706 1549 aa8.24□□□□□ -1.09
PATJ-202ENST00000316485 DCAF1Q9Y4B6 1507 aa8.08□□□□□ -1.12
PATJ-202ENST00000316485 SENP3Q9H4L4 574 aaPredicted RBP8.08□□□□□ -1.12
PATJ-202ENST00000316485 SCRIBQ14160 1630 aa7.99□□□□□ -1.13
PATJ-202ENST00000316485 NACADO15069 1562 aa7.99□□□□□ -1.13
PATJ-202ENST00000316485 SUPT5HO00267 1087 aaKnown RBP7.98□□□□□ -1.13
PATJ-202ENST00000316485 PHF23Q9BUL5 403 aaPredicted RBP7.97□□□□□ -1.13
PATJ-202ENST00000316485 MYO15BQ96JP2 1530 aa7.96□□□□□ -1.13
PATJ-202ENST00000316485 RB1CC1Q8TDY2 1594 aa7.95□□□□□ -1.14
PATJ-202ENST00000316485 PABPN1Q86U42 306 aaKnown RBP eCLIP7.83□□□□□ -1.16
PATJ-202ENST00000316485 UNC13AQ9UPW8 1703 aa7.75□□□□□ -1.17
PATJ-202ENST00000316485 CECR2Q9BXF3 1484 aa7.73□□□□□ -1.17
PATJ-202ENST00000316485 RSF1Q96T23 1441 aaPredicted RBP7.7□□□□□ -1.18
PATJ-202ENST00000316485 BICRAQ9NZM4 1560 aa7.68□□□□□ -1.18
PATJ-202ENST00000316485 MROH2BQ7Z745 1585 aa7.67□□□□□ -1.18
PATJ-202ENST00000316485 BAZ1AQ9NRL2 1556 aaPredicted RBP7.63□□□□□ -1.19
PATJ-202ENST00000316485 WIZO95785 1651 aa7.61□□□□□ -1.19
PATJ-202ENST00000316485 SMARCA4P51532 1647 aa7.59□□□□□ -1.19
PATJ-202ENST00000316485 FOXD1Q16676 465 aa7.58□□□□□ -1.2
PATJ-202ENST00000316485 TOP2AP11388 1531 aaKnown RBP7.49□□□□□ -1.21
PATJ-202ENST00000316485 EIF4G1Q04637 1599 aaKnown RBP7.48□□□□□ -1.21
PATJ-202ENST00000316485 ATAD2BQ9ULI0 1458 aa7.48□□□□□ -1.21
PATJ-202ENST00000316485 BAZ1BQ9UIG0 1483 aaKnown RBP7.47□□□□□ -1.21
PATJ-202ENST00000316485 SMARCA2P51531 1590 aa7.46□□□□□ -1.22
PATJ-202ENST00000316485 CCDC88BA6NC98 1476 aa7.46□□□□□ -1.22
PATJ-202ENST00000316485 TRIM41Q8WV44 630 aa7.45□□□□□ -1.22
PATJ-202ENST00000316485 PEG3Q9GZU2 1588 aa7.43□□□□□ -1.22
PATJ-202ENST00000316485 FAM9AQ8IZU1 332 aaPredicted RBP7.4□□□□□ -1.22
PATJ-202ENST00000316485 CC2D2AQ9P2K1 1620 aa7.39□□□□□ -1.23
PATJ-202ENST00000316485 NCAPD3P42695 1498 aa7.38□□□□□ -1.23
PATJ-202ENST00000316485 EHMT2Q96KQ7 1210 aa7.37□□□□□ -1.23
PATJ-202ENST00000316485 HMGXB3Q12766 1538 aa7.35□□□□□ -1.23
PATJ-202ENST00000316485 ABCC8Q09428 1581 aa7.34□□□□□ -1.23
PATJ-202ENST00000316485 POTEDQ86YR6 584 aa7.33□□□□□ -1.24
PATJ-202ENST00000316485 LOC105371045A0A1W2PR82 267 aa7.33□□□□□ -1.24
PATJ-202ENST00000316485 DNAJC5BQ9UF47 199 aa7.29□□□□□ -1.24
PATJ-202ENST00000316485 WRNQ14191 1432 aaPredicted RBP eCLIP7.27□□□□□ -1.25
PATJ-202ENST00000316485 CADPSQ9ULU8 1353 aa7.24□□□□□ -1.25
PATJ-202ENST00000316485 CFTRP13569 1480 aa7.23□□□□□ -1.25
PATJ-202ENST00000316485 NESP48681 1621 aa7.22□□□□□ -1.25
PATJ-202ENST00000316485 SYNJ1O43426 1573 aa7.22□□□□□ -1.25
PATJ-202ENST00000316485 SOGA1O94964 1423 aa7.21□□□□□ -1.26
PATJ-202ENST00000316485 RUSC2Q8N2Y8 1516 aa7.18□□□□□ -1.26
PATJ-202ENST00000316485 FANCD2Q9BXW9 1451 aa7.18□□□□□ -1.26
PATJ-202ENST00000316485 CSRNP3Q8WYN3 585 aa7.17□□□□□ -1.26
PATJ-202ENST00000316485 UBTFP17480 764 aaKnown RBP7.16□□□□□ -1.26
PATJ-202ENST00000316485 CUX1P39880 1505 aa7.16□□□□□ -1.26
PATJ-202ENST00000316485 TOP2BQ02880 1626 aa7.15□□□□□ -1.27
PATJ-202ENST00000316485 MSH5O43196 834 aa7.14□□□□□ -1.27
PATJ-202ENST00000316485 PRDM2Q13029 1718 aa7.14□□□□□ -1.27
PATJ-202ENST00000316485 RANGAP1P46060 587 aaPredicted RBP7.14□□□□□ -1.27
PATJ-202ENST00000316485 PDS5BQ9NTI5 1447 aa7.13□□□□□ -1.27
PATJ-202ENST00000316485 CEP164Q9UPV0 1460 aa7.13□□□□□ -1.27
PATJ-202ENST00000316485 LAMC3Q9Y6N6 1575 aa7.13□□□□□ -1.27
PATJ-202ENST00000316485 EEA1Q15075 1411 aa7.13□□□□□ -1.27
PATJ-202ENST00000316485 BIVM-ERCC5R4GMW8 1640 aa7.12□□□□□ -1.27
PATJ-202ENST00000316485 FGD5Q6ZNL6 1462 aa7.1□□□□□ -1.27
PATJ-202ENST00000316485 CUX2O14529 1486 aa7.09□□□□□ -1.27
PATJ-202ENST00000316485 KIF27Q86VH2 1401 aa7.09□□□□□ -1.27
PATJ-202ENST00000316485 TOPBP1Q92547 1522 aa7.08□□□□□ -1.28
PATJ-202ENST00000316485 KIF21AQ7Z4S6 1674 aa7.07□□□□□ -1.28
PATJ-202ENST00000316485 RAD54L2Q9Y4B4 1467 aa7.07□□□□□ -1.28
PATJ-202ENST00000316485 ERCC6Q03468 1493 aa7.07□□□□□ -1.28
PATJ-202ENST00000316485 GOLGA3Q08378 1498 aa7.07□□□□□ -1.28
PATJ-202ENST00000316485 DNMBPQ6XZF7 1577 aa7.07□□□□□ -1.28
PATJ-202ENST00000316485 URB2Q14146 1524 aaKnown RBP7.07□□□□□ -1.28
PATJ-202ENST00000316485 PPARGC1BQ86YN6 1023 aaKnown RBP7.06□□□□□ -1.28
PATJ-202ENST00000316485 POLA1P09884 1462 aaPredicted RBP7.05□□□□□ -1.28
PATJ-202ENST00000316485 RAPGEF2Q9Y4G8 1499 aa7.05□□□□□ -1.28
PATJ-202ENST00000316485 TTBK1Q5TCY1 1321 aaPredicted RBP7.04□□□□□ -1.28
PATJ-202ENST00000316485 TNIKQ9UKE5 1360 aa7.04□□□□□ -1.28
PATJ-202ENST00000316485 CEP162Q5TB80 1403 aa7.04□□□□□ -1.28
PATJ-202ENST00000316485 TDRD9Q8NDG6 1382 aaKnown RBP7.03□□□□□ -1.28
PATJ-202ENST00000316485 PCGF6Q9BYE7 350 aa7.03□□□□□ -1.28
PATJ-202ENST00000316485 PIAS4Q8N2W9 510 aaPredicted RBP7.03□□□□□ -1.28
PATJ-202ENST00000316485 MRC2Q9UBG0 1479 aa7.02□□□□□ -1.29
PATJ-202ENST00000316485 KIF21BO75037 1637 aa7.02□□□□□ -1.29
PATJ-202ENST00000316485 IGF1RP08069 1367 aa7.01□□□□□ -1.29
PATJ-202ENST00000316485 CARMIL1Q5VZK9 1371 aa7.01□□□□□ -1.29
PATJ-202ENST00000316485 PRXQ9BXM0 1461 aa6.99□□□□□ -1.29
PATJ-202ENST00000316485 ABCA10Q8WWZ4 1543 aa6.99□□□□□ -1.29
PATJ-202ENST00000316485 CLIP1P30622 1438 aa6.99□□□□□ -1.29
PATJ-202ENST00000316485 GAPVD1Q14C86 1478 aa6.97□□□□□ -1.29
PATJ-202ENST00000316485 ERICH3Q5RHP9 1530 aa6.96□□□□□ -1.29
PATJ-202ENST00000316485 AQRO60306 1485 aaKnown RBP eCLIP6.96□□□□□ -1.29
PATJ-202ENST00000316485 APLP2Q06481 763 aa6.96□□□□□ -1.3
PATJ-202ENST00000316485 P3H3Q8IVL6 736 aa6.96□□□□□ -1.3
PATJ-202ENST00000316485 PPP6R1Q9UPN7 881 aa6.95□□□□□ -1.3
PATJ-202ENST00000316485 TRIM26Q12899 539 aaPredicted RBP6.95□□□□□ -1.3
PATJ-202ENST00000316485 WDR62O43379 1518 aa6.94□□□□□ -1.3
PATJ-202ENST00000316485 ZNF608Q9ULD9 1512 aaPredicted RBP6.94□□□□□ -1.3
PATJ-202ENST00000316485 FBLN2P98095 1184 aa6.94□□□□□ -1.3
PATJ-202ENST00000316485 ATP1B4Q9UN42 357 aaPredicted RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms