RNA–Protein interactions for RNA: ENST00000548013.5

CNPY2-206, Transcript of canopy FGF signaling regulator 2, humanhuman

TSL 1 (best)

Gene CNPY2, Length 817 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNPY2-206ENST00000548013 NISCHQ9Y2I1 1504 aa44.24■■■■■ 4.67
CNPY2-206ENST00000548013 CCDC180Q9P1Z9 1646 aa39.36■■■■□ 3.89
CNPY2-206ENST00000548013 ABCC9O60706 1549 aa39.27■■■■□ 3.88
CNPY2-206ENST00000548013 DCAF8L2P0C7V8 631 aa37.4■■■■□ 3.58
CNPY2-206ENST00000548013 RB1CC1Q8TDY2 1594 aa37.4■■■■□ 3.58
CNPY2-206ENST00000548013 NACADO15069 1562 aa37.24■■■■□ 3.55
CNPY2-206ENST00000548013 MYO15BQ96JP2 1530 aa36.81■■■■□ 3.48
CNPY2-206ENST00000548013 PABPN1Q86U42 306 aaKnown RBP eCLIP36.74■■■■□ 3.47
CNPY2-206ENST00000548013 ZCCHC6Q5VYS8 1495 aaKnown RBP36.71■■■■□ 3.47
CNPY2-206ENST00000548013 DNAJC5BQ9UF47 199 aa36.67■■■■□ 3.46
CNPY2-206ENST00000548013 DCAF1Q9Y4B6 1507 aa36.49■■■■□ 3.43
CNPY2-206ENST00000548013 UNC13AQ9UPW8 1703 aa36.46■■■■□ 3.43
CNPY2-206ENST00000548013 BICRAQ9NZM4 1560 aa36.35■■■■□ 3.41
CNPY2-206ENST00000548013 SCRIBQ14160 1630 aa36.05■■■■□ 3.36
CNPY2-206ENST00000548013 SHROOM4Q9ULL8 1493 aa35.79■■■■□ 3.32
CNPY2-206ENST00000548013 EIF4G1Q04637 1599 aaKnown RBP35.42■■■■□ 3.26
CNPY2-206ENST00000548013 CC2D2AQ9P2K1 1620 aa35.4■■■■□ 3.26
CNPY2-206ENST00000548013 CECR2Q9BXF3 1484 aa35.31■■■■□ 3.24
CNPY2-206ENST00000548013 NCAPD3P42695 1498 aa34.45■■■■□ 3.1
CNPY2-206ENST00000548013 ATAD2BQ9ULI0 1458 aa34.4■■■■□ 3.1
CNPY2-206ENST00000548013 SMARCA4P51532 1647 aa34.37■■■■□ 3.09
CNPY2-206ENST00000548013 BAZ1AQ9NRL2 1556 aaPredicted RBP34.26■■■■□ 3.07
CNPY2-206ENST00000548013 SMARCA2P51531 1590 aa34.24■■■■□ 3.07
CNPY2-206ENST00000548013 MROH2BQ7Z745 1585 aa34.13■■■■□ 3.05
CNPY2-206ENST00000548013 HMGXB3Q12766 1538 aa34.13■■■■□ 3.05
CNPY2-206ENST00000548013 BAZ1BQ9UIG0 1483 aaKnown RBP34.06■■■■□ 3.04
CNPY2-206ENST00000548013 PEG3Q9GZU2 1588 aa34.02■■■■□ 3.04
CNPY2-206ENST00000548013 NESP48681 1621 aa33.85■■■■□ 3.01
CNPY2-206ENST00000548013 ERCC6Q03468 1493 aa33.84■■■■□ 3.01
CNPY2-206ENST00000548013 WIZO95785 1651 aa33.69■■■□□ 2.98
CNPY2-206ENST00000548013 CUX2O14529 1486 aa33.6■■■□□ 2.97
CNPY2-206ENST00000548013 RSF1Q96T23 1441 aaPredicted RBP33.58■■■□□ 2.97
CNPY2-206ENST00000548013 LAMC3Q9Y6N6 1575 aa33.52■■■□□ 2.96
CNPY2-206ENST00000548013 CADPSQ9ULU8 1353 aa33.46■■■□□ 2.95
CNPY2-206ENST00000548013 PDS5BQ9NTI5 1447 aa33.41■■■□□ 2.94
CNPY2-206ENST00000548013 DNAJC5Q9H3Z4 198 aa33.34■■■□□ 2.93
CNPY2-206ENST00000548013 THOC2Q8NI27 1593 aaKnown RBP33.29■■■□□ 2.92
CNPY2-206ENST00000548013 KIF21AQ7Z4S6 1674 aa33.26■■■□□ 2.92
CNPY2-206ENST00000548013 TOP2AP11388 1531 aaKnown RBP33.26■■■□□ 2.91
CNPY2-206ENST00000548013 CFTRP13569 1480 aa33.11■■■□□ 2.89
CNPY2-206ENST00000548013 MRC2Q9UBG0 1479 aa33.07■■■□□ 2.88
CNPY2-206ENST00000548013 FANCD2Q9BXW9 1451 aa33.05■■■□□ 2.88
CNPY2-206ENST00000548013 CEP164Q9UPV0 1460 aa33.01■■■□□ 2.88
CNPY2-206ENST00000548013 CCDC88BA6NC98 1476 aa32.99■■■□□ 2.87
CNPY2-206ENST00000548013 WDR62O43379 1518 aa32.95■■■□□ 2.87
CNPY2-206ENST00000548013 URB2Q14146 1524 aaKnown RBP32.76■■■□□ 2.83
CNPY2-206ENST00000548013 PRDM2Q13029 1718 aa32.55■■■□□ 2.8
CNPY2-206ENST00000548013 SUPT5HO00267 1087 aaKnown RBP32.48■■■□□ 2.79
CNPY2-206ENST00000548013 TOPBP1Q92547 1522 aa32.44■■■□□ 2.78
CNPY2-206ENST00000548013 IFT140Q96RY7 1462 aa32.35■■■□□ 2.77
CNPY2-206ENST00000548013 ABCC8Q09428 1581 aa32.34■■■□□ 2.77
CNPY2-206ENST00000548013 ZNF608Q9ULD9 1512 aaPredicted RBP32.33■■■□□ 2.77
CNPY2-206ENST00000548013 DNMBPQ6XZF7 1577 aa32.3■■■□□ 2.76
CNPY2-206ENST00000548013 OSCARQ8IYS5 282 aa32.27■■■□□ 2.76
CNPY2-206ENST00000548013 POLA1P09884 1462 aaPredicted RBP32.15■■■□□ 2.74
CNPY2-206ENST00000548013 AQRO60306 1485 aaKnown RBP eCLIP32.11■■■□□ 2.73
CNPY2-206ENST00000548013 RAD54L2Q9Y4B4 1467 aa32.09■■■□□ 2.73
CNPY2-206ENST00000548013 TARBP1Q13395 1621 aaKnown RBP32.08■■■□□ 2.73
CNPY2-206ENST00000548013 TRIM41Q8WV44 630 aa32.07■■■□□ 2.72
CNPY2-206ENST00000548013 SOGA1O94964 1423 aa32.06■■■□□ 2.72
CNPY2-206ENST00000548013 EIF4G3O43432 1585 aaKnown RBP32.05■■■□□ 2.72
CNPY2-206ENST00000548013 CUX1P39880 1505 aa32.03■■■□□ 2.72
CNPY2-206ENST00000548013 FGD5Q6ZNL6 1462 aa31.99■■■□□ 2.71
CNPY2-206ENST00000548013 TDRD9Q8NDG6 1382 aaKnown RBP31.99■■■□□ 2.71
CNPY2-206ENST00000548013 FBLN2P98095 1184 aa31.88■■■□□ 2.69
CNPY2-206ENST00000548013 SNAPC4Q5SXM2 1469 aa31.73■■■□□ 2.67
CNPY2-206ENST00000548013 CHD1O14646 1710 aa31.69■■■□□ 2.66
CNPY2-206ENST00000548013 WDR97A6NE52 1622 aa31.68■■■□□ 2.66
CNPY2-206ENST00000548013 GRIN2BQ13224 1484 aa31.68■■■□□ 2.66
CNPY2-206ENST00000548013 RIMBP3CA6NJZ7 1639 aa31.67■■■□□ 2.66
CNPY2-206ENST00000548013 RIMBP3BA6NNM3 1639 aa31.67■■■□□ 2.66
CNPY2-206ENST00000548013 RIMBP3Q9UFD9 1639 aa31.67■■■□□ 2.66
CNPY2-206ENST00000548013 CHMP7Q8WUX9 453 aaPredicted RBP31.67■■■□□ 2.66
CNPY2-206ENST00000548013 ARHGEF11O15085 1522 aa31.65■■■□□ 2.66
CNPY2-206ENST00000548013 WRNQ14191 1432 aaPredicted RBP eCLIP31.64■■■□□ 2.66
CNPY2-206ENST00000548013 GAPVD1Q14C86 1478 aa31.63■■■□□ 2.65
CNPY2-206ENST00000548013 ABCA10Q8WWZ4 1543 aa31.63■■■□□ 2.65
CNPY2-206ENST00000548013 MAGI1Q96QZ7 1491 aaPredicted RBP31.6■■■□□ 2.65
CNPY2-206ENST00000548013 SYNJ1O43426 1573 aa31.56■■■□□ 2.64
CNPY2-206ENST00000548013 TOP2BQ02880 1626 aa31.54■■■□□ 2.64
CNPY2-206ENST00000548013 CYB5RLQ6IPT4 315 aa31.54■■■□□ 2.64
CNPY2-206ENST00000548013 SYNJ2O15056 1496 aa31.52■■■□□ 2.64
CNPY2-206ENST00000548013 ABCA5Q8WWZ7 1642 aa31.49■■■□□ 2.63
CNPY2-206ENST00000548013 BIVM-ERCC5R4GMW8 1640 aa31.49■■■□□ 2.63
CNPY2-206ENST00000548013 PBRM1Q86U86 1689 aa31.44■■■□□ 2.62
CNPY2-206ENST00000548013 CLASP1Q7Z460 1538 aa31.41■■■□□ 2.62
CNPY2-206ENST00000548013 ARAP1Q96P48 1450 aa31.39■■■□□ 2.62
CNPY2-206ENST00000548013 GRIN2AQ12879 1464 aa31.27■■■□□ 2.6
CNPY2-206ENST00000548013 FHAD1B1AJZ9 1412 aa31.24■■■□□ 2.59
CNPY2-206ENST00000548013 ADAMTS12P58397 1594 aa31.24■■■□□ 2.59
CNPY2-206ENST00000548013 ERICH3Q5RHP9 1530 aa31.2■■■□□ 2.59
CNPY2-206ENST00000548013 NUP160Q12769 1436 aa31.15■■■□□ 2.58
CNPY2-206ENST00000548013 CEP170Q5SW79 1584 aa31.13■■■□□ 2.57
CNPY2-206ENST00000548013 TRHP20396 242 aaPredicted RBP31.06■■■□□ 2.56
CNPY2-206ENST00000548013 IGF1RP08069 1367 aa31.04■■■□□ 2.56
CNPY2-206ENST00000548013 ERCC6L2Q5T890 1561 aa31.03■■■□□ 2.56
CNPY2-206ENST00000548013 KIF27Q86VH2 1401 aa31.01■■■□□ 2.55
CNPY2-206ENST00000548013 JPH4Q96JJ6 628 aa30.95■■■□□ 2.55
CNPY2-206ENST00000548013 SHROOM2Q13796 1616 aa30.89■■■□□ 2.54
CNPY2-206ENST00000548013 PRG4Q92954 1404 aaPredicted RBP30.88■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms