RNA–Protein interactions for RNA: ENST00000514435.1

LRBA-212, Transcript of LPS responsive beige-like anchor protein, humanhuman

TSL 2

Gene LRBA, Length 2,140 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRBA-212ENST00000514435 NISCHQ9Y2I1 1504 aa34.85■■■■□ 3.17
LRBA-212ENST00000514435 CCDC180Q9P1Z9 1646 aa30.84■■■□□ 2.53
LRBA-212ENST00000514435 ABCC9O60706 1549 aa30.1■■■□□ 2.41
LRBA-212ENST00000514435 ZCCHC6Q5VYS8 1495 aaKnown RBP29.08■■■□□ 2.25
LRBA-212ENST00000514435 DCAF8L2P0C7V8 631 aa29.06■■■□□ 2.24
LRBA-212ENST00000514435 NACADO15069 1562 aa28.94■■■□□ 2.22
LRBA-212ENST00000514435 RB1CC1Q8TDY2 1594 aa28.93■■■□□ 2.22
LRBA-212ENST00000514435 MYO15BQ96JP2 1530 aa28.8■■■□□ 2.2
LRBA-212ENST00000514435 DCAF1Q9Y4B6 1507 aa28.77■■■□□ 2.2
LRBA-212ENST00000514435 UNC13AQ9UPW8 1703 aa28.39■■■□□ 2.14
LRBA-212ENST00000514435 SCRIBQ14160 1630 aa28.26■■■□□ 2.11
LRBA-212ENST00000514435 PABPN1Q86U42 306 aaKnown RBP eCLIP28.19■■■□□ 2.1
LRBA-212ENST00000514435 BICRAQ9NZM4 1560 aa28.16■■■□□ 2.1
LRBA-212ENST00000514435 SHROOM4Q9ULL8 1493 aa27.75■■■□□ 2.03
LRBA-212ENST00000514435 DNAJC5BQ9UF47 199 aa27.53■■■□□ 2
LRBA-212ENST00000514435 EIF4G1Q04637 1599 aaKnown RBP27.36■■□□□ 1.97
LRBA-212ENST00000514435 CC2D2AQ9P2K1 1620 aa27.22■■□□□ 1.95
LRBA-212ENST00000514435 CECR2Q9BXF3 1484 aa27.21■■□□□ 1.95
LRBA-212ENST00000514435 SMARCA4P51532 1647 aa27.01■■□□□ 1.91
LRBA-212ENST00000514435 BAZ1AQ9NRL2 1556 aaPredicted RBP26.96■■□□□ 1.91
LRBA-212ENST00000514435 MROH2BQ7Z745 1585 aa26.92■■□□□ 1.9
LRBA-212ENST00000514435 ATAD2BQ9ULI0 1458 aa26.81■■□□□ 1.88
LRBA-212ENST00000514435 NCAPD3P42695 1498 aa26.73■■□□□ 1.87
LRBA-212ENST00000514435 SMARCA2P51531 1590 aa26.72■■□□□ 1.87
LRBA-212ENST00000514435 PEG3Q9GZU2 1588 aa26.71■■□□□ 1.87
LRBA-212ENST00000514435 RSF1Q96T23 1441 aaPredicted RBP26.65■■□□□ 1.86
LRBA-212ENST00000514435 WIZO95785 1651 aa26.64■■□□□ 1.86
LRBA-212ENST00000514435 HMGXB3Q12766 1538 aa26.61■■□□□ 1.85
LRBA-212ENST00000514435 BAZ1BQ9UIG0 1483 aaKnown RBP26.58■■□□□ 1.84
LRBA-212ENST00000514435 TOP2AP11388 1531 aaKnown RBP26.31■■□□□ 1.8
LRBA-212ENST00000514435 NESP48681 1621 aa26.15■■□□□ 1.78
LRBA-212ENST00000514435 SUPT5HO00267 1087 aaKnown RBP26.14■■□□□ 1.78
LRBA-212ENST00000514435 CCDC88BA6NC98 1476 aa26.03■■□□□ 1.76
LRBA-212ENST00000514435 LAMC3Q9Y6N6 1575 aa25.98■■□□□ 1.75
LRBA-212ENST00000514435 CADPSQ9ULU8 1353 aa25.97■■□□□ 1.75
LRBA-212ENST00000514435 CFTRP13569 1480 aa25.87■■□□□ 1.73
LRBA-212ENST00000514435 ERCC6Q03468 1493 aa25.85■■□□□ 1.73
LRBA-212ENST00000514435 KIF21AQ7Z4S6 1674 aa25.8■■□□□ 1.72
LRBA-212ENST00000514435 PDS5BQ9NTI5 1447 aa25.77■■□□□ 1.72
LRBA-212ENST00000514435 FANCD2Q9BXW9 1451 aa25.69■■□□□ 1.7
LRBA-212ENST00000514435 PRDM2Q13029 1718 aa25.66■■□□□ 1.7
LRBA-212ENST00000514435 THOC2Q8NI27 1593 aaKnown RBP25.66■■□□□ 1.7
LRBA-212ENST00000514435 CEP164Q9UPV0 1460 aa25.62■■□□□ 1.69
LRBA-212ENST00000514435 MRC2Q9UBG0 1479 aa25.55■■□□□ 1.68
LRBA-212ENST00000514435 CUX2O14529 1486 aa25.48■■□□□ 1.67
LRBA-212ENST00000514435 WDR62O43379 1518 aa25.47■■□□□ 1.67
LRBA-212ENST00000514435 URB2Q14146 1524 aaKnown RBP25.47■■□□□ 1.67
LRBA-212ENST00000514435 TOPBP1Q92547 1522 aa25.32■■□□□ 1.64
LRBA-212ENST00000514435 DNMBPQ6XZF7 1577 aa25.28■■□□□ 1.64
LRBA-212ENST00000514435 CUX1P39880 1505 aa25.23■■□□□ 1.63
LRBA-212ENST00000514435 ABCC8Q09428 1581 aa25.2■■□□□ 1.62
LRBA-212ENST00000514435 POLA1P09884 1462 aaPredicted RBP25.13■■□□□ 1.61
LRBA-212ENST00000514435 FGD5Q6ZNL6 1462 aa25.09■■□□□ 1.61
LRBA-212ENST00000514435 SYNJ1O43426 1573 aa25.09■■□□□ 1.61
LRBA-212ENST00000514435 WRNQ14191 1432 aaPredicted RBP eCLIP25.09■■□□□ 1.61
LRBA-212ENST00000514435 RAD54L2Q9Y4B4 1467 aa25.06■■□□□ 1.6
LRBA-212ENST00000514435 IFT140Q96RY7 1462 aa25.05■■□□□ 1.6
LRBA-212ENST00000514435 ZNF608Q9ULD9 1512 aaPredicted RBP25.04■■□□□ 1.6
LRBA-212ENST00000514435 TARBP1Q13395 1621 aaKnown RBP25.04■■□□□ 1.6
LRBA-212ENST00000514435 TOP2BQ02880 1626 aa25.02■■□□□ 1.6
LRBA-212ENST00000514435 BIVM-ERCC5R4GMW8 1640 aa25.01■■□□□ 1.59
LRBA-212ENST00000514435 SOGA1O94964 1423 aa24.99■■□□□ 1.59
LRBA-212ENST00000514435 EIF4G3O43432 1585 aaKnown RBP24.91■■□□□ 1.58
LRBA-212ENST00000514435 AQRO60306 1485 aaKnown RBP eCLIP24.9■■□□□ 1.582e-6■■■■■ 26.9
LRBA-212ENST00000514435 TDRD9Q8NDG6 1382 aaKnown RBP24.88■■□□□ 1.57
LRBA-212ENST00000514435 WDR97A6NE52 1622 aa24.88■■□□□ 1.57
LRBA-212ENST00000514435 ABCA10Q8WWZ4 1543 aa24.83■■□□□ 1.56
LRBA-212ENST00000514435 ABCA5Q8WWZ7 1642 aa24.74■■□□□ 1.55
LRBA-212ENST00000514435 GAPVD1Q14C86 1478 aa24.71■■□□□ 1.55
LRBA-212ENST00000514435 PBRM1Q86U86 1689 aa24.66■■□□□ 1.54
LRBA-212ENST00000514435 GRIN2BQ13224 1484 aa24.66■■□□□ 1.54
LRBA-212ENST00000514435 SNAPC4Q5SXM2 1469 aa24.65■■□□□ 1.54
LRBA-212ENST00000514435 TRIM41Q8WV44 630 aa24.61■■□□□ 1.53
LRBA-212ENST00000514435 CHD1O14646 1710 aa24.56■■□□□ 1.52
LRBA-212ENST00000514435 MAGI1Q96QZ7 1491 aaPredicted RBP24.56■■□□□ 1.52
LRBA-212ENST00000514435 FBLN2P98095 1184 aa24.52■■□□□ 1.52
LRBA-212ENST00000514435 DNAJC5Q9H3Z4 198 aa24.52■■□□□ 1.52
LRBA-212ENST00000514435 KIF27Q86VH2 1401 aa24.51■■□□□ 1.51
LRBA-212ENST00000514435 ERICH3Q5RHP9 1530 aa24.51■■□□□ 1.51
LRBA-212ENST00000514435 RUSC2Q8N2Y8 1516 aa24.5■■□□□ 1.51
LRBA-212ENST00000514435 CHIC1Q5VXU3 224 aa24.5■■□□□ 1.51
LRBA-212ENST00000514435 ADAMTS12P58397 1594 aa24.48■■□□□ 1.51
LRBA-212ENST00000514435 SYNJ2O15056 1496 aa24.48■■□□□ 1.51
LRBA-212ENST00000514435 OSCARQ8IYS5 282 aa24.47■■□□□ 1.51
LRBA-212ENST00000514435 IGF1RP08069 1367 aa24.45■■□□□ 1.5
LRBA-212ENST00000514435 CHMP7Q8WUX9 453 aaPredicted RBP24.44■■□□□ 1.5
LRBA-212ENST00000514435 FHAD1B1AJZ9 1412 aa24.4■■□□□ 1.5
LRBA-212ENST00000514435 GRIN2AQ12879 1464 aa24.37■■□□□ 1.49
LRBA-212ENST00000514435 CUL7Q14999 1698 aa24.31■■□□□ 1.48
LRBA-212ENST00000514435 CEP170Q5SW79 1584 aa24.29■■□□□ 1.48
LRBA-212ENST00000514435 CLASP1Q7Z460 1538 aa24.28■■□□□ 1.48
LRBA-212ENST00000514435 CARMIL1Q5VZK9 1371 aa24.28■■□□□ 1.48
LRBA-212ENST00000514435 NUP160Q12769 1436 aa24.25■■□□□ 1.47
LRBA-212ENST00000514435 FAM9AQ8IZU1 332 aaPredicted RBP24.19■■□□□ 1.46
LRBA-212ENST00000514435 PRXQ9BXM0 1461 aa24.14■■□□□ 1.46
LRBA-212ENST00000514435 RAPGEF2Q9Y4G8 1499 aa24.14■■□□□ 1.46
LRBA-212ENST00000514435 ARHGEF11O15085 1522 aa24.14■■□□□ 1.45
LRBA-212ENST00000514435 RIMBP3CA6NJZ7 1639 aa24.13■■□□□ 1.45
LRBA-212ENST00000514435 RIMBP3BA6NNM3 1639 aa24.13■■□□□ 1.45
LRBA-212ENST00000514435 RIMBP3Q9UFD9 1639 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms