RNA–Protein interactions for RNA: ENST00000635023.1

PATJ-214, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 5

Gene PATJ, Length 5,242 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-214ENST00000635023 PELP1Q8IZL8 1130 aaKnown RBP15.57■□□□□ 0.08
PATJ-214ENST00000635023 DCAF8L2P0C7V8 631 aa15.47■□□□□ 0.07
PATJ-214ENST00000635023 CCER1Q8TC90 406 aaPredicted RBP14.84□□□□□ -0.03
PATJ-214ENST00000635023 ERICH6Q7L0X2 663 aa14.8□□□□□ -0.04
PATJ-214ENST00000635023 SUPT5HO00267 1087 aaKnown RBP14.69□□□□□ -0.06
PATJ-214ENST00000635023 APLP2Q06481 763 aa14.69□□□□□ -0.06
PATJ-214ENST00000635023 MYT1Q01538 1121 aa14.64□□□□□ -0.07
PATJ-214ENST00000635023 FAM9AQ8IZU1 332 aaPredicted RBP14.61□□□□□ -0.07
PATJ-214ENST00000635023 CENPBP07199 599 aaPredicted RBP14.53□□□□□ -0.08
PATJ-214ENST00000635023 EHMT2Q96KQ7 1210 aa14.33□□□□□ -0.12
PATJ-214ENST00000635023 NEFLP07196 543 aa14.31□□□□□ -0.12
PATJ-214ENST00000635023 ZEB1P37275 1124 aaPredicted RBP14.28□□□□□ -0.12
PATJ-214ENST00000635023 YTHDC1Q96MU7 727 aaKnown RBP14.19□□□□□ -0.14
PATJ-214ENST00000635023 DAXXQ9UER7 740 aaPredicted RBP14.1□□□□□ -0.15
PATJ-214ENST00000635023 PCGF6Q9BYE7 350 aa14.1□□□□□ -0.15
PATJ-214ENST00000635023 SHROOM4Q9ULL8 1493 aa14.02□□□□□ -0.16
PATJ-214ENST00000635023 TTBK1Q5TCY1 1321 aaPredicted RBP13.94□□□□□ -0.18
PATJ-214ENST00000635023 ATP1B4Q9UN42 357 aaPredicted RBP13.84□□□□□ -0.19
PATJ-214ENST00000635023 RTL5Q5HYW3 569 aaPredicted RBP13.74□□□□□ -0.21
PATJ-214ENST00000635023 RANGAP1P46060 587 aaPredicted RBP13.73□□□□□ -0.21
PATJ-214ENST00000635023 ZNF316A6NFI3 1004 aaPredicted RBP13.68□□□□□ -0.22
PATJ-214ENST00000635023 TRIM41Q8WV44 630 aa13.68□□□□□ -0.22
PATJ-214ENST00000635023 UBTFP17480 764 aaKnown RBP13.67□□□□□ -0.22
PATJ-214ENST00000635023 CLSPNQ9HAW4 1339 aa13.57□□□□□ -0.24
PATJ-214ENST00000635023 POLR3GLQ9BT43 218 aa13.51□□□□□ -0.25
PATJ-214ENST00000635023 MYT1LQ9UL68 1186 aa13.49□□□□□ -0.25
PATJ-214ENST00000635023 NISCHQ9Y2I1 1504 aa13.42□□□□□ -0.26
PATJ-214ENST00000635023 TRIM26Q12899 539 aaPredicted RBP13.4□□□□□ -0.26
PATJ-214ENST00000635023 ZBTB47Q9UFB7 747 aaPredicted RBP13.38□□□□□ -0.27
PATJ-214ENST00000635023 HRCP23327 699 aa13.35□□□□□ -0.27
PATJ-214ENST00000635023 SLC4A1APQ9BWU0 796 aaKnown RBP13.34□□□□□ -0.27
PATJ-214ENST00000635023 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.33□□□□□ -0.28
PATJ-214ENST00000635023 HNRNPUL2Q1KMD3 747 aaKnown RBP13.33□□□□□ -0.28
PATJ-214ENST00000635023 ITGAEP38570 1179 aa13.26□□□□□ -0.29
PATJ-214ENST00000635023 CNGB1Q14028 1251 aaPredicted RBP13.24□□□□□ -0.29
PATJ-214ENST00000635023 CDK11AQ9UQ88 783 aaPredicted RBP13.22□□□□□ -0.29
PATJ-214ENST00000635023 GLIPR1L2Q4G1C9 344 aa13.18□□□□□ -0.3
PATJ-214ENST00000635023 PPARGC1BQ86YN6 1023 aaKnown RBP13.17□□□□□ -0.3
PATJ-214ENST00000635023 ANP32BQ92688 251 aaKnown RBP13.17□□□□□ -0.3
PATJ-214ENST00000635023 DIEXFQ68CQ4 756 aaKnown RBP13.11□□□□□ -0.31
PATJ-214ENST00000635023 NEFMP07197 916 aa13.1□□□□□ -0.31
PATJ-214ENST00000635023 CHIC1Q5VXU3 224 aa13.09□□□□□ -0.31
PATJ-214ENST00000635023 CANXP27824 592 aaKnown RBP13.07□□□□□ -0.32
PATJ-214ENST00000635023 ANP32AP39687 249 aaKnown RBP13.07□□□□□ -0.32
PATJ-214ENST00000635023 ANP32CO43423 234 aa13.04□□□□□ -0.32
PATJ-214ENST00000635023 EIF5BO60841 1220 aaKnown RBP13.01□□□□□ -0.33
PATJ-214ENST00000635023 TRIM52Q96A61 297 aa12.98□□□□□ -0.33
PATJ-214ENST00000635023 BCANQ96GW7 911 aa12.96□□□□□ -0.33
PATJ-214ENST00000635023 SLC24A1O60721 1099 aa12.96□□□□□ -0.34
PATJ-214ENST00000635023 HSP90AA1P07900 732 aaKnown RBP12.93□□□□□ -0.34
PATJ-214ENST00000635023 UPF2Q9HAU5 1272 aaKnown RBP12.92□□□□□ -0.34
PATJ-214ENST00000635023 FAM50AQ14320 339 aaKnown RBP12.9□□□□□ -0.34
PATJ-214ENST00000635023 GTF3C3Q9Y5Q9 886 aa12.9□□□□□ -0.34
PATJ-214ENST00000635023 CDK11BP21127 795 aaKnown RBP12.88□□□□□ -0.35
PATJ-214ENST00000635023 BCL11AQ9H165 835 aa12.87□□□□□ -0.35
PATJ-214ENST00000635023 NEUROD1Q13562 356 aa12.84□□□□□ -0.35
PATJ-214ENST00000635023 ZNF326Q5BKZ1 582 aaKnown RBP12.82□□□□□ -0.36
PATJ-214ENST00000635023 NPM2Q86SE8 214 aaKnown RBP12.8□□□□□ -0.36
PATJ-214ENST00000635023 TNNT2P45379 298 aaPredicted RBP12.74□□□□□ -0.37
PATJ-214ENST00000635023 LOC105371045A0A1W2PR82 267 aa12.73□□□□□ -0.37
PATJ-214ENST00000635023 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.7□□□□□ -0.38
PATJ-214ENST00000635023 ANP32EQ9BTT0 268 aa12.7□□□□□ -0.38
PATJ-214ENST00000635023 ACIN1Q9UKV3 1341 aaKnown RBP12.66□□□□□ -0.38
PATJ-214ENST00000635023 NCLP19338 710 aaKnown RBP12.63□□□□□ -0.39
PATJ-214ENST00000635023 TRIM44Q96DX7 344 aaPredicted RBP12.6□□□□□ -0.39
PATJ-214ENST00000635023 ESF1Q9H501 851 aaKnown RBP12.59□□□□□ -0.39
PATJ-214ENST00000635023 GOLGA6L22H0YM25 854 aa12.58□□□□□ -0.4
PATJ-214ENST00000635023 FKBP8Q14318 412 aa12.57□□□□□ -0.4
PATJ-214ENST00000635023 MYH16Q9H6N6 1097 aa12.57□□□□□ -0.4
PATJ-214ENST00000635023 CCDC136Q96JN2 1154 aa12.56□□□□□ -0.4
PATJ-214ENST00000635023 BECN1Q14457 450 aa12.55□□□□□ -0.4
PATJ-214ENST00000635023 ZRSR1Q15695 479 aaKnown RBP12.54□□□□□ -0.4
PATJ-214ENST00000635023 DDRGK1Q96HY6 314 aa12.53□□□□□ -0.4
PATJ-214ENST00000635023 HNRNPUQ00839 825 aaKnown RBP eCLIP12.51□□□□□ -0.41
PATJ-214ENST00000635023 NBR1Q14596 966 aa12.5□□□□□ -0.41
PATJ-214ENST00000635023 STAG3Q9UJ98 1225 aa12.5□□□□□ -0.41
PATJ-214ENST00000635023 ARXQ96QS3 562 aa12.5□□□□□ -0.41
PATJ-214ENST00000635023 ERICH6BQ5W0A0 696 aa12.48□□□□□ -0.41
PATJ-214ENST00000635023 PTMAP06454 111 aaKnown RBP12.47□□□□□ -0.41
PATJ-214ENST00000635023 WDR43Q15061 677 aaKnown RBP eCLIP12.47□□□□□ -0.41
PATJ-214ENST00000635023 TMC1Q8TDI8 760 aa12.45□□□□□ -0.42
PATJ-214ENST00000635023 TONSLQ96HA7 1378 aa12.45□□□□□ -0.42
PATJ-214ENST00000635023 DNTTIP2Q5QJE6 756 aaKnown RBP12.43□□□□□ -0.42
PATJ-214ENST00000635023 NRDCO43847 1150 aa12.43□□□□□ -0.42
PATJ-214ENST00000635023 FAM9BQ8IZU0 186 aa12.43□□□□□ -0.42
PATJ-214ENST00000635023 FBLN2P98095 1184 aa12.42□□□□□ -0.42
PATJ-214ENST00000635023 GOLGA6L6A8MZA4 724 aa12.42□□□□□ -0.42
PATJ-214ENST00000635023 CHGAP10645 457 aaKnown RBP12.41□□□□□ -0.42
PATJ-214ENST00000635023 ZNF777Q9ULD5 760 aaPredicted RBP12.39□□□□□ -0.43
PATJ-214ENST00000635023 CASC1Q6TDU7 716 aa12.38□□□□□ -0.43
PATJ-214ENST00000635023 PPM1GO15355 546 aaPredicted RBP12.38□□□□□ -0.43
PATJ-214ENST00000635023 L1TD1Q5T7N2 865 aaKnown RBP12.36□□□□□ -0.43
PATJ-214ENST00000635023 SALL2Q9Y467 1007 aaPredicted RBP12.34□□□□□ -0.43
PATJ-214ENST00000635023 MRS2Q9HD23 443 aa12.32□□□□□ -0.44
PATJ-214ENST00000635023 NAP1L5Q96NT1 182 aaPredicted RBP12.31□□□□□ -0.44
PATJ-214ENST00000635023 DDX10Q13206 875 aaKnown RBP12.3□□□□□ -0.44
PATJ-214ENST00000635023 CHAF1AQ13111 956 aaPredicted RBP12.3□□□□□ -0.44
PATJ-214ENST00000635023 NPM1P06748 294 aaKnown RBP eCLIP12.29□□□□□ -0.44
PATJ-214ENST00000635023 CHMP4BQ9H444 224 aaKnown RBP12.27□□□□□ -0.45
PATJ-214ENST00000635023 A0A0G2JS52 829 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms