RNA–Protein interactions for RNA: ENST00000635214.1

PATJ-216, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene PATJ, Length 4,863 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-216ENST00000635214 NISCHQ9Y2I1 1504 aa16.78■□□□□ 0.28
PATJ-216ENST00000635214 CCDC180Q9P1Z9 1646 aa15.01□□□□□ -0.01
PATJ-216ENST00000635214 ABCC9O60706 1549 aa14.61□□□□□ -0.07
PATJ-216ENST00000635214 DCAF8L2P0C7V8 631 aa14.55□□□□□ -0.08
PATJ-216ENST00000635214 RB1CC1Q8TDY2 1594 aa14.33□□□□□ -0.12
PATJ-216ENST00000635214 PELP1Q8IZL8 1130 aaKnown RBP14.27□□□□□ -0.12
PATJ-216ENST00000635214 NACADO15069 1562 aa14.27□□□□□ -0.12
PATJ-216ENST00000635214 MYO15BQ96JP2 1530 aa14.13□□□□□ -0.15
PATJ-216ENST00000635214 DCAF1Q9Y4B6 1507 aa14.02□□□□□ -0.16
PATJ-216ENST00000635214 MYT1Q01538 1121 aa13.97□□□□□ -0.17
PATJ-216ENST00000635214 ZCCHC6Q5VYS8 1495 aaKnown RBP13.93□□□□□ -0.18
PATJ-216ENST00000635214 SHROOM4Q9ULL8 1493 aa13.9□□□□□ -0.18
PATJ-216ENST00000635214 SUPT5HO00267 1087 aaKnown RBP13.81□□□□□ -0.2
PATJ-216ENST00000635214 PABPN1Q86U42 306 aaKnown RBP eCLIP13.68□□□□□ -0.22
PATJ-216ENST00000635214 CENPBP07199 599 aaPredicted RBP13.64□□□□□ -0.23
PATJ-216ENST00000635214 CCER1Q8TC90 406 aaPredicted RBP13.58□□□□□ -0.23
PATJ-216ENST00000635214 ERICH6Q7L0X2 663 aa13.58□□□□□ -0.24
PATJ-216ENST00000635214 SCRIBQ14160 1630 aa13.56□□□□□ -0.24
PATJ-216ENST00000635214 ZEB1P37275 1124 aaPredicted RBP13.51□□□□□ -0.25
PATJ-216ENST00000635214 PCGF6Q9BYE7 350 aa13.4□□□□□ -0.26
PATJ-216ENST00000635214 APLP2Q06481 763 aa13.37□□□□□ -0.27
PATJ-216ENST00000635214 CECR2Q9BXF3 1484 aa13.27□□□□□ -0.29
PATJ-216ENST00000635214 SMARCA2P51531 1590 aa13.25□□□□□ -0.29
PATJ-216ENST00000635214 EHMT2Q96KQ7 1210 aa13.25□□□□□ -0.29
PATJ-216ENST00000635214 BAZ1AQ9NRL2 1556 aaPredicted RBP13.22□□□□□ -0.29
PATJ-216ENST00000635214 NEFLP07196 543 aa13.21□□□□□ -0.29
PATJ-216ENST00000635214 BICRAQ9NZM4 1560 aa13.21□□□□□ -0.29
PATJ-216ENST00000635214 EIF4G1Q04637 1599 aaKnown RBP13.19□□□□□ -0.3
PATJ-216ENST00000635214 UNC13AQ9UPW8 1703 aa13.15□□□□□ -0.3
PATJ-216ENST00000635214 BAZ1BQ9UIG0 1483 aaKnown RBP13.11□□□□□ -0.31
PATJ-216ENST00000635214 CC2D2AQ9P2K1 1620 aa13.1□□□□□ -0.31
PATJ-216ENST00000635214 TRIM41Q8WV44 630 aa13.08□□□□□ -0.32
PATJ-216ENST00000635214 FAM9AQ8IZU1 332 aaPredicted RBP13.05□□□□□ -0.32
PATJ-216ENST00000635214 NCAPD3P42695 1498 aa13.04□□□□□ -0.32
PATJ-216ENST00000635214 ERCC6Q03468 1493 aa13.04□□□□□ -0.32
PATJ-216ENST00000635214 HMGXB3Q12766 1538 aa13□□□□□ -0.33
PATJ-216ENST00000635214 YTHDC1Q96MU7 727 aaKnown RBP12.98□□□□□ -0.33
PATJ-216ENST00000635214 PDS5BQ9NTI5 1447 aa12.98□□□□□ -0.33
PATJ-216ENST00000635214 SMARCA4P51532 1647 aa12.98□□□□□ -0.33
PATJ-216ENST00000635214 HRCP23327 699 aa12.97□□□□□ -0.33
PATJ-216ENST00000635214 ATAD2BQ9ULI0 1458 aa12.96□□□□□ -0.33
PATJ-216ENST00000635214 TTBK1Q5TCY1 1321 aaPredicted RBP12.93□□□□□ -0.34
PATJ-216ENST00000635214 DNAJC5BQ9UF47 199 aa12.9□□□□□ -0.34
PATJ-216ENST00000635214 DAXXQ9UER7 740 aaPredicted RBP12.85□□□□□ -0.35
PATJ-216ENST00000635214 TRIM26Q12899 539 aaPredicted RBP12.85□□□□□ -0.35
PATJ-216ENST00000635214 PEG3Q9GZU2 1588 aa12.8□□□□□ -0.36
PATJ-216ENST00000635214 CHIC1Q5VXU3 224 aa12.79□□□□□ -0.36
PATJ-216ENST00000635214 CADPSQ9ULU8 1353 aa12.78□□□□□ -0.36
PATJ-216ENST00000635214 LAMC3Q9Y6N6 1575 aa12.77□□□□□ -0.37
PATJ-216ENST00000635214 ABCC8Q09428 1581 aa12.76□□□□□ -0.37
PATJ-216ENST00000635214 CUX2O14529 1486 aa12.76□□□□□ -0.37
PATJ-216ENST00000635214 TOP2AP11388 1531 aaKnown RBP12.76□□□□□ -0.37
PATJ-216ENST00000635214 RSF1Q96T23 1441 aaPredicted RBP12.74□□□□□ -0.37
PATJ-216ENST00000635214 RTL5Q5HYW3 569 aaPredicted RBP12.74□□□□□ -0.37
PATJ-216ENST00000635214 MROH2BQ7Z745 1585 aa12.73□□□□□ -0.37
PATJ-216ENST00000635214 UBTFP17480 764 aaKnown RBP12.72□□□□□ -0.37
PATJ-216ENST00000635214 CEP164Q9UPV0 1460 aa12.69□□□□□ -0.38
PATJ-216ENST00000635214 MRC2Q9UBG0 1479 aa12.64□□□□□ -0.39
PATJ-216ENST00000635214 RANGAP1P46060 587 aaPredicted RBP12.59□□□□□ -0.39
PATJ-216ENST00000635214 FANCD2Q9BXW9 1451 aa12.57□□□□□ -0.4
PATJ-216ENST00000635214 ATP1B4Q9UN42 357 aaPredicted RBP12.54□□□□□ -0.4
PATJ-216ENST00000635214 DIEXFQ68CQ4 756 aaKnown RBP12.54□□□□□ -0.4
PATJ-216ENST00000635214 CFTRP13569 1480 aa12.54□□□□□ -0.4
PATJ-216ENST00000635214 WIZO95785 1651 aa12.53□□□□□ -0.4
PATJ-216ENST00000635214 ZNF316A6NFI3 1004 aaPredicted RBP12.53□□□□□ -0.4
PATJ-216ENST00000635214 PPARGC1BQ86YN6 1023 aaKnown RBP12.48□□□□□ -0.41
PATJ-216ENST00000635214 CCDC88BA6NC98 1476 aa12.48□□□□□ -0.41
PATJ-216ENST00000635214 IFT140Q96RY7 1462 aa12.47□□□□□ -0.41
PATJ-216ENST00000635214 GTF3C3Q9Y5Q9 886 aa12.47□□□□□ -0.41
PATJ-216ENST00000635214 OSCARQ8IYS5 282 aa12.4□□□□□ -0.42
PATJ-216ENST00000635214 CHMP7Q8WUX9 453 aaPredicted RBP12.39□□□□□ -0.43
PATJ-216ENST00000635214 CDK11AQ9UQ88 783 aaPredicted RBP12.38□□□□□ -0.43
PATJ-216ENST00000635214 WRNQ14191 1432 aaPredicted RBP eCLIP12.38□□□□□ -0.43
PATJ-216ENST00000635214 NESP48681 1621 aa12.37□□□□□ -0.43
PATJ-216ENST00000635214 FBLN2P98095 1184 aa12.37□□□□□ -0.43
PATJ-216ENST00000635214 CLSPNQ9HAW4 1339 aa12.37□□□□□ -0.43
PATJ-216ENST00000635214 LOC105371045A0A1W2PR82 267 aa12.35□□□□□ -0.43
PATJ-216ENST00000635214 WDR62O43379 1518 aa12.35□□□□□ -0.43
PATJ-216ENST00000635214 DNMBPQ6XZF7 1577 aa12.34□□□□□ -0.43
PATJ-216ENST00000635214 SOGA1O94964 1423 aa12.34□□□□□ -0.43
PATJ-216ENST00000635214 WDR97A6NE52 1622 aa12.33□□□□□ -0.44
PATJ-216ENST00000635214 ACIN1Q9UKV3 1341 aaKnown RBP12.33□□□□□ -0.44
PATJ-216ENST00000635214 MYT1LQ9UL68 1186 aa12.32□□□□□ -0.44
PATJ-216ENST00000635214 POLR3GLQ9BT43 218 aa12.31□□□□□ -0.44
PATJ-216ENST00000635214 HNRNPUL2Q1KMD3 747 aaKnown RBP12.31□□□□□ -0.44
PATJ-216ENST00000635214 PRDM2Q13029 1718 aa12.3□□□□□ -0.44
PATJ-216ENST00000635214 NPM1P06748 294 aaKnown RBP eCLIP12.3□□□□□ -0.44
PATJ-216ENST00000635214 EEA1Q15075 1411 aa12.3□□□□□ -0.44
PATJ-216ENST00000635214 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.28□□□□□ -0.44
PATJ-216ENST00000635214 GLIPR1L2Q4G1C9 344 aa12.28□□□□□ -0.44
PATJ-216ENST00000635214 CSRNP3Q8WYN3 585 aa12.26□□□□□ -0.45
PATJ-216ENST00000635214 TOPBP1Q92547 1522 aa12.26□□□□□ -0.45
PATJ-216ENST00000635214 ITGAEP38570 1179 aa12.26□□□□□ -0.45
PATJ-216ENST00000635214 BCANQ96GW7 911 aa12.25□□□□□ -0.45
PATJ-216ENST00000635214 KIF27Q86VH2 1401 aa12.24□□□□□ -0.45
PATJ-216ENST00000635214 GRIN2BQ13224 1484 aa12.23□□□□□ -0.45
PATJ-216ENST00000635214 THOC2Q8NI27 1593 aaKnown RBP12.22□□□□□ -0.45
PATJ-216ENST00000635214 KIF21AQ7Z4S6 1674 aa12.22□□□□□ -0.45
PATJ-216ENST00000635214 ANP32AP39687 249 aaKnown RBP12.2□□□□□ -0.46
PATJ-216ENST00000635214 EIF5BO60841 1220 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms