RNA–Protein interactions for RNA: ENST00000613764.4

PATJ-213, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 5 BASIC

Gene PATJ, Length 4,172 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-213ENST00000613764 NISCHQ9Y2I1 1504 aa10.16□□□□□ -0.78
PATJ-213ENST00000613764 DCAF8L2P0C7V8 631 aa8.98□□□□□ -0.97
PATJ-213ENST00000613764 SHROOM4Q9ULL8 1493 aa8.75□□□□□ -1.01
PATJ-213ENST00000613764 CCDC180Q9P1Z9 1646 aa8.65□□□□□ -1.03
PATJ-213ENST00000613764 SUPT5HO00267 1087 aaKnown RBP8.6□□□□□ -1.03
PATJ-213ENST00000613764 ZCCHC6Q5VYS8 1495 aaKnown RBP8.51□□□□□ -1.05
PATJ-213ENST00000613764 ABCC9O60706 1549 aa8.43□□□□□ -1.06
PATJ-213ENST00000613764 DCAF1Q9Y4B6 1507 aa8.28□□□□□ -1.08
PATJ-213ENST00000613764 SCRIBQ14160 1630 aa8.19□□□□□ -1.1
PATJ-213ENST00000613764 NACADO15069 1562 aa8.17□□□□□ -1.1
PATJ-213ENST00000613764 MYO15BQ96JP2 1530 aa8.12□□□□□ -1.11
PATJ-213ENST00000613764 RB1CC1Q8TDY2 1594 aa8.12□□□□□ -1.11
PATJ-213ENST00000613764 PABPN1Q86U42 306 aaKnown RBP eCLIP8.1□□□□□ -1.11
PATJ-213ENST00000613764 CHIC1Q5VXU3 224 aa8.08□□□□□ -1.12
PATJ-213ENST00000613764 TRIM41Q8WV44 630 aa8.04□□□□□ -1.12
PATJ-213ENST00000613764 RSF1Q96T23 1441 aaPredicted RBP7.99□□□□□ -1.13
PATJ-213ENST00000613764 FAM9AQ8IZU1 332 aaPredicted RBP7.99□□□□□ -1.13
PATJ-213ENST00000613764 EHMT2Q96KQ7 1210 aa7.96□□□□□ -1.14
PATJ-213ENST00000613764 CECR2Q9BXF3 1484 aa7.94□□□□□ -1.14
PATJ-213ENST00000613764 BAZ1AQ9NRL2 1556 aaPredicted RBP7.88□□□□□ -1.15
PATJ-213ENST00000613764 MROH2BQ7Z745 1585 aa7.86□□□□□ -1.15
PATJ-213ENST00000613764 LOC105371045A0A1W2PR82 267 aa7.86□□□□□ -1.15
PATJ-213ENST00000613764 PELP1Q8IZL8 1130 aaKnown RBP7.78□□□□□ -1.16
PATJ-213ENST00000613764 MYT1Q01538 1121 aa7.77□□□□□ -1.17
PATJ-213ENST00000613764 WIZO95785 1651 aa7.77□□□□□ -1.17
PATJ-213ENST00000613764 UBTFP17480 764 aaKnown RBP7.76□□□□□ -1.17
PATJ-213ENST00000613764 PCGF6Q9BYE7 350 aa7.76□□□□□ -1.17
PATJ-213ENST00000613764 SMARCA4P51532 1647 aa7.74□□□□□ -1.17
PATJ-213ENST00000613764 BAZ1BQ9UIG0 1483 aaKnown RBP7.74□□□□□ -1.17
PATJ-213ENST00000613764 TOP2AP11388 1531 aaKnown RBP7.71□□□□□ -1.18
PATJ-213ENST00000613764 CCDC88BA6NC98 1476 aa7.7□□□□□ -1.18
PATJ-213ENST00000613764 APLP2Q06481 763 aa7.69□□□□□ -1.18
PATJ-213ENST00000613764 SMARCA2P51531 1590 aa7.69□□□□□ -1.18
PATJ-213ENST00000613764 RANGAP1P46060 587 aaPredicted RBP7.68□□□□□ -1.18
PATJ-213ENST00000613764 BICRAQ9NZM4 1560 aa7.68□□□□□ -1.18
PATJ-213ENST00000613764 ATAD2BQ9ULI0 1458 aa7.67□□□□□ -1.18
PATJ-213ENST00000613764 UNC13AQ9UPW8 1703 aa7.66□□□□□ -1.18
PATJ-213ENST00000613764 CSRNP3Q8WYN3 585 aa7.66□□□□□ -1.18
PATJ-213ENST00000613764 TTBK1Q5TCY1 1321 aaPredicted RBP7.65□□□□□ -1.18
PATJ-213ENST00000613764 TRIM26Q12899 539 aaPredicted RBP7.64□□□□□ -1.19
PATJ-213ENST00000613764 WRNQ14191 1432 aaPredicted RBP eCLIP7.63□□□□□ -1.19
PATJ-213ENST00000613764 PPARGC1BQ86YN6 1023 aaKnown RBP7.62□□□□□ -1.19
PATJ-213ENST00000613764 ABCC8Q09428 1581 aa7.59□□□□□ -1.19
PATJ-213ENST00000613764 EIF4G1Q04637 1599 aaKnown RBP7.58□□□□□ -1.2
PATJ-213ENST00000613764 EEA1Q15075 1411 aa7.57□□□□□ -1.2
PATJ-213ENST00000613764 NCAPD3P42695 1498 aa7.57□□□□□ -1.2
PATJ-213ENST00000613764 SOGA1O94964 1423 aa7.53□□□□□ -1.2
PATJ-213ENST00000613764 PEG3Q9GZU2 1588 aa7.52□□□□□ -1.21
PATJ-213ENST00000613764 ATP1B4Q9UN42 357 aaPredicted RBP7.52□□□□□ -1.21
PATJ-213ENST00000613764 CADPSQ9ULU8 1353 aa7.5□□□□□ -1.21
PATJ-213ENST00000613764 HRCP23327 699 aa7.5□□□□□ -1.21
PATJ-213ENST00000613764 ZEB1P37275 1124 aaPredicted RBP7.49□□□□□ -1.21
PATJ-213ENST00000613764 HMGXB3Q12766 1538 aa7.49□□□□□ -1.21
PATJ-213ENST00000613764 GOLGA3Q08378 1498 aa7.49□□□□□ -1.21
PATJ-213ENST00000613764 TNIKQ9UKE5 1360 aa7.48□□□□□ -1.21
PATJ-213ENST00000613764 CCER1Q8TC90 406 aaPredicted RBP7.47□□□□□ -1.21
PATJ-213ENST00000613764 KIF27Q86VH2 1401 aa7.47□□□□□ -1.21
PATJ-213ENST00000613764 CEP164Q9UPV0 1460 aa7.47□□□□□ -1.21
PATJ-213ENST00000613764 CEP162Q5TB80 1403 aa7.46□□□□□ -1.21
PATJ-213ENST00000613764 CC2D2AQ9P2K1 1620 aa7.44□□□□□ -1.22
PATJ-213ENST00000613764 CLIP1P30622 1438 aa7.44□□□□□ -1.22
PATJ-213ENST00000613764 RUSC2Q8N2Y8 1516 aa7.44□□□□□ -1.22
PATJ-213ENST00000613764 CFTRP13569 1480 aa7.43□□□□□ -1.22
PATJ-213ENST00000613764 CUX2O14529 1486 aa7.41□□□□□ -1.22
PATJ-213ENST00000613764 HNRNPUL2Q1KMD3 747 aaKnown RBP7.41□□□□□ -1.22
PATJ-213ENST00000613764 PDS5BQ9NTI5 1447 aa7.41□□□□□ -1.22
PATJ-213ENST00000613764 FANCD2Q9BXW9 1451 aa7.4□□□□□ -1.23
PATJ-213ENST00000613764 SYNJ1O43426 1573 aa7.39□□□□□ -1.23
PATJ-213ENST00000613764 P3H3Q8IVL6 736 aa7.39□□□□□ -1.23
PATJ-213ENST00000613764 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.37□□□□□ -1.23
PATJ-213ENST00000613764 CARMIL1Q5VZK9 1371 aa7.37□□□□□ -1.23
PATJ-213ENST00000613764 ITGAEP38570 1179 aa7.36□□□□□ -1.23
PATJ-213ENST00000613764 RAPGEF2Q9Y4G8 1499 aa7.35□□□□□ -1.23
PATJ-213ENST00000613764 FBLN2P98095 1184 aa7.35□□□□□ -1.23
PATJ-213ENST00000613764 TOP2BQ02880 1626 aa7.35□□□□□ -1.23
PATJ-213ENST00000613764 FGD5Q6ZNL6 1462 aa7.33□□□□□ -1.24
PATJ-213ENST00000613764 CUX1P39880 1505 aa7.33□□□□□ -1.24
PATJ-213ENST00000613764 NESP48681 1621 aa7.33□□□□□ -1.24
PATJ-213ENST00000613764 ERCC6Q03468 1493 aa7.33□□□□□ -1.24
PATJ-213ENST00000613764 TDRD9Q8NDG6 1382 aaKnown RBP7.32□□□□□ -1.24
PATJ-213ENST00000613764 DNAJC5BQ9UF47 199 aa7.31□□□□□ -1.24
PATJ-213ENST00000613764 VPS8Q8N3P4 1428 aa7.31□□□□□ -1.24
PATJ-213ENST00000613764 IGF1RP08069 1367 aa7.3□□□□□ -1.24
PATJ-213ENST00000613764 FAM50AQ14320 339 aaKnown RBP7.3□□□□□ -1.24
PATJ-213ENST00000613764 KIF21BO75037 1637 aa7.29□□□□□ -1.24
PATJ-213ENST00000613764 RAD54L2Q9Y4B4 1467 aa7.29□□□□□ -1.24
PATJ-213ENST00000613764 CHMP7Q8WUX9 453 aaPredicted RBP7.27□□□□□ -1.24
PATJ-213ENST00000613764 TOPBP1Q92547 1522 aa7.27□□□□□ -1.25
PATJ-213ENST00000613764 PRXQ9BXM0 1461 aa7.26□□□□□ -1.25
PATJ-213ENST00000613764 LAMC3Q9Y6N6 1575 aa7.26□□□□□ -1.25
PATJ-213ENST00000613764 BIVM-ERCC5R4GMW8 1640 aa7.26□□□□□ -1.25
PATJ-213ENST00000613764 ERICH3Q5RHP9 1530 aa7.25□□□□□ -1.25
PATJ-213ENST00000613764 ARID3CA6NKF2 412 aa7.25□□□□□ -1.25
PATJ-213ENST00000613764 ERICH6Q7L0X2 663 aa7.25□□□□□ -1.25
PATJ-213ENST00000613764 POLA1P09884 1462 aaPredicted RBP7.25□□□□□ -1.25
PATJ-213ENST00000613764 DNMBPQ6XZF7 1577 aa7.25□□□□□ -1.25
PATJ-213ENST00000613764 FHAD1B1AJZ9 1412 aa7.24□□□□□ -1.25
PATJ-213ENST00000613764 GAPVD1Q14C86 1478 aa7.23□□□□□ -1.25
PATJ-213ENST00000613764 SLC24A1O60721 1099 aa7.22□□□□□ -1.25
PATJ-213ENST00000613764 MTUS2Q5JR59 1369 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms