Protein–RNA interactions for Protein: O15371

EIF3D, Eukaryotic translation initiation factor 3 subunit D, humanhuman

Known RBP eCLIP

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3DO15371 EEF1D-241ENST00000531931 614 ntTSL 325.07■■□□□ 1.65e-6■□□□□ 10.6
EIF3DO15371 EEF1D-217ENST00000526786 1246 ntTSL 225.07■■□□□ 1.65e-6■□□□□ 10.6
EIF3DO15371 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC24.9■■□□□ 1.585e-6■□□□□ 10.6
EIF3DO15371 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.565e-6■□□□□ 10.6
EIF3DO15371 EEF1D-212ENST00000525695 907 ntTSL 524.45■■□□□ 1.55e-6■□□□□ 10.6
EIF3DO15371 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.475e-6■□□□□ 10.6
EIF3DO15371 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC22.9■■□□□ 1.265e-6■□□□□ 10.6
EIF3DO15371 EEF1D-216ENST00000526710 996 ntTSL 222.51■■□□□ 1.195e-6■□□□□ 10.6
EIF3DO15371 LARP1-204ENST00000518297 2630 ntTSL 522.19■■□□□ 1.142e-6■□□□□ 10.6
EIF3DO15371 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.15e-6■□□□□ 10.6
EIF3DO15371 MAD1L1-213ENST00000455998 557 ntTSL 421.86■■□□□ 1.099e-12■□□□□ 10.6
EIF3DO15371 MAD1L1-207ENST00000429779 555 ntTSL 421.06■□□□□ 0.969e-12■□□□□ 10.6
EIF3DO15371 EEF1D-235ENST00000530848 688 ntTSL 320.91■□□□□ 0.945e-6■□□□□ 10.6
EIF3DO15371 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.835e-6■□□□□ 10.6
EIF3DO15371 EEF1D-228ENST00000529832 600 ntTSL 420.19■□□□□ 0.825e-6■□□□□ 10.6
EIF3DO15371 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.73■□□□□ 0.755e-6■□□□□ 10.6
EIF3DO15371 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.755e-6■□□□□ 10.6
EIF3DO15371 EEF1D-249ENST00000533749 633 ntTSL 519.22■□□□□ 0.675e-6■□□□□ 10.6
EIF3DO15371 EEF1D-209ENST00000524900 343 ntTSL 518.81■□□□□ 0.65e-6■□□□□ 10.6
EIF3DO15371 EEF1D-224ENST00000529007 861 ntTSL 218.74■□□□□ 0.595e-6■□□□□ 10.6
EIF3DO15371 EEF1D-206ENST00000524397 957 ntTSL 318.74■□□□□ 0.595e-6■□□□□ 10.6
EIF3DO15371 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.74■□□□□ 0.595e-6■□□□□ 10.6
EIF3DO15371 EEF1D-237ENST00000531281 813 ntTSL 218.65■□□□□ 0.585e-6■□□□□ 10.6
EIF3DO15371 EEF1D-250ENST00000533833 831 ntTSL 518.37■□□□□ 0.535e-6■□□□□ 10.6
EIF3DO15371 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.515e-6■□□□□ 10.6
EIF3DO15371 EEF1D-244ENST00000532543 791 ntTSL 317.12■□□□□ 0.335e-6■□□□□ 10.6
EIF3DO15371 EEF1D-230ENST00000530191 853 ntTSL 316.81■□□□□ 0.285e-6■□□□□ 10.6
EIF3DO15371 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.275e-6■□□□□ 10.6
EIF3DO15371 EEF1D-251ENST00000534232 817 ntTSL 516.51■□□□□ 0.235e-6■□□□□ 10.6
EIF3DO15371 EEF1D-231ENST00000530306 583 ntTSL 216.28■□□□□ 0.25e-6■□□□□ 10.6
EIF3DO15371 EEF1D-239ENST00000531670 926 ntTSL 316.28■□□□□ 0.25e-6■□□□□ 10.6
EIF3DO15371 EEF1D-245ENST00000532596 761 ntTSL 416.04■□□□□ 0.165e-6■□□□□ 10.6
EIF3DO15371 EEF1D-211ENST00000525261 559 ntTSL 216.04■□□□□ 0.165e-6■□□□□ 10.6
EIF3DO15371 EEF1D-252ENST00000534377 617 ntTSL 215.97■□□□□ 0.155e-6■□□□□ 10.6
EIF3DO15371 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.075e-6■□□□□ 10.6
EIF3DO15371 EEF1D-247ENST00000533204 842 ntTSL 214.9□□□□□ -0.025e-6■□□□□ 10.6
EIF3DO15371 EEF1D-236ENST00000531218 787 ntTSL 314.74□□□□□ -0.055e-6■□□□□ 10.6
EIF3DO15371 EEF1D-253ENST00000534380 1001 ntTSL 514.74□□□□□ -0.055e-6■□□□□ 10.6
EIF3DO15371 EEF1D-215ENST00000526340 770 ntTSL 314.46□□□□□ -0.095e-6■□□□□ 10.6
EIF3DO15371 EEF1D-233ENST00000530545 616 ntTSL 414.45□□□□□ -0.15e-6■□□□□ 10.6
EIF3DO15371 EEF1D-248ENST00000533494 758 ntTSL 514.09□□□□□ -0.155e-6■□□□□ 10.6
EIF3DO15371 EEF1D-220ENST00000528303 558 ntTSL 413.74□□□□□ -0.215e-6■□□□□ 10.6
EIF3DO15371 EEF1D-254ENST00000534475 538 ntTSL 413.59□□□□□ -0.235e-6■□□□□ 10.6
EIF3DO15371 EEF1D-242ENST00000531953 506 ntTSL 413.35□□□□□ -0.275e-6■□□□□ 10.6
EIF3DO15371 LARP1-201ENST00000336314 6595 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.392e-6■□□□□ 10.6
EIF3DO15371 EEF1D-213ENST00000526133 367 ntTSL 210.57□□□□□ -0.725e-6■□□□□ 10.6
EIF3DO15371 EEF1D-226ENST00000529516 473 ntTSL 39.56□□□□□ -0.885e-6■□□□□ 10.6
EIF3DO15371 EEF1D-255ENST00000534804 555 ntTSL 49.16□□□□□ -0.945e-6■□□□□ 10.6
EIF3DO15371 HUWE1-202ENST00000262854 14739 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.662e-6■□□□□ 10.6
EIF3DO15371 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.242e-6■□□□□ 10.6
EIF3DO15371 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.92□□□□□ -1.462e-6■□□□□ 10.6
EIF3DO15371 COL27A1-207ENST00000494090 5329 ntTSL 1 (best)20.19■□□□□ 0.828e-7■□□□□ 10.6
EIF3DO15371 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.962e-6■□□□□ 10.6
EIF3DO15371 TAF4-207ENST00000608887 284 ntTSL 49.35□□□□□ -0.912e-6■□□□□ 10.6
EIF3DO15371 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.35■□□□□ 0.691e-7■□□□□ 10.6
EIF3DO15371 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.05■□□□□ 0.641e-7■□□□□ 10.6
EIF3DO15371 SFT2D1-202ENST00000478705 659 ntTSL 217.66■□□□□ 0.421e-7■□□□□ 10.6
EIF3DO15371 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.281e-7■□□□□ 10.6
EIF3DO15371 SFT2D1-204ENST00000487841 2576 ntTSL 1 (best)13.95□□□□□ -0.181e-7■□□□□ 10.6
EIF3DO15371 CMIP-203ENST00000539778 3937 ntTSL 1 (best) BASIC13.26□□□□□ -0.291e-7■□□□□ 10.6
EIF3DO15371 CMIP-211ENST00000621537 4000 ntTSL 5 BASIC11.61□□□□□ -0.551e-7■□□□□ 10.6
EIF3DO15371 DST-224ENST00000521821 735 ntTSL 28.83□□□□□ -11e-7■□□□□ 10.6
EIF3DO15371 DST-229ENST00000523817 545 ntTSL 55.05□□□□□ -1.61e-7■□□□□ 10.6
EIF3DO15371 DST-226ENST00000522538 565 ntTSL 45.05□□□□□ -1.61e-7■□□□□ 10.6
EIF3DO15371 DST-235ENST00000633795 912 ntTSL 1 (best)3.9□□□□□ -1.791e-7■□□□□ 10.6
EIF3DO15371 UBR4-207ENST00000425413 2954 ntTSL 212.62□□□□□ -0.393e-8■□□□□ 10.6
EIF3DO15371 KTN1-201ENST00000334975 2485 ntTSL 27.74□□□□□ -1.173e-8■□□□□ 10.6
EIF3DO15371 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.49□□□□□ -1.693e-8■□□□□ 10.6
EIF3DO15371 KTN1-220ENST00000555172 1985 ntTSL 23.88□□□□□ -1.793e-8■□□□□ 10.6
EIF3DO15371 DST-213ENST00000487754 2250 ntTSL 25.15□□□□□ -1.582e-6■□□□□ 10.6
EIF3DO15371 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.73■□□□□ 0.596e-10■□□□□ 10.6
EIF3DO15371 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.36■□□□□ 0.216e-10■□□□□ 10.6
EIF3DO15371 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.326e-10■□□□□ 10.6
EIF3DO15371 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC8.88□□□□□ -0.996e-10■□□□□ 10.6
EIF3DO15371 FARP1-224ENST00000598389 747 ntTSL 56.08□□□□□ -1.446e-10■□□□□ 10.6
EIF3DO15371 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.71e-7■□□□□ 10.5
EIF3DO15371 SSB-206ENST00000461708 619 ntTSL 219.18■□□□□ 0.661e-7■□□□□ 10.5
EIF3DO15371 SSB-204ENST00000417292 545 ntTSL 314.4□□□□□ -0.11e-7■□□□□ 10.5
EIF3DO15371 SSB-203ENST00000413002 674 ntTSL 314.25□□□□□ -0.131e-7■□□□□ 10.5
EIF3DO15371 SSB-205ENST00000422006 2463 ntTSL 58.14□□□□□ -1.111e-7■□□□□ 10.5
EIF3DO15371 HIST1H2BM-201ENST00000621112 381 ntAPPRIS P1 BASIC9.18□□□□□ -0.947e-8■□□□□ 10.5
EIF3DO15371 PLXNB1-203ENST00000449094 3863 ntTSL 213.32□□□□□ -0.288e-8■□□□□ 10.5
EIF3DO15371 BTAF1-201ENST00000265990 7250 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.541e-6■□□□□ 10.5
EIF3DO15371 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.71e-6■□□□□ 10.5
EIF3DO15371 TTC3-202ENST00000355666 7712 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.689e-7■□□□□ 10.5
EIF3DO15371 TTC3-216ENST00000479930 8998 ntTSL 1 (best)9.54□□□□□ -0.889e-7■□□□□ 10.5
EIF3DO15371 TTC3-215ENST00000476784 7425 ntTSL 26.94□□□□□ -1.39e-7■□□□□ 10.5
EIF3DO15371 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.329e-7■□□□□ 10.5
EIF3DO15371 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.469e-7■□□□□ 10.5
EIF3DO15371 PKD1-227ENST00000564313 568 ntTSL 419.97■□□□□ 0.791e-6■□□□□ 10.5
EIF3DO15371 SNHG14-218ENST00000553108 2208 ntTSL 1 (best) BASIC14.38□□□□□ -0.112e-7■□□□□ 10.5
EIF3DO15371 PRPF4B-205ENST00000480058 6775 ntTSL 1 (best)6.71□□□□□ -1.347e-7■□□□□ 10.5
EIF3DO15371 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.447e-7■□□□□ 10.5
EIF3DO15371 PSME4-208ENST00000481518 886 ntTSL 524.88■■□□□ 1.579e-18■□□□□ 10.5
EIF3DO15371 PSME4-201ENST00000389993 6581 ntTSL 1 (best)15.36■□□□□ 0.059e-18■□□□□ 10.5
EIF3DO15371 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.139e-18■□□□□ 10.5
EIF3DO15371 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC25.88■■□□□ 1.733e-7■□□□□ 10.5
EIF3DO15371 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC25.88■■□□□ 1.733e-7■□□□□ 10.5
EIF3DO15371 RAB10-204ENST00000495146 1292 ntTSL 524.59■■□□□ 1.538e-10■□□□□ 10.5
EIF3DO15371 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC23.06■■□□□ 1.283e-7■□□□□ 10.5
Retrieved 100 of 4,069 protein–RNA pairs in 32.3 ms