RNA–Protein interactions for RNA: ENST00000555172.5

KTN1-220, Transcript of kinectin 1, humanhuman

TSL 2

Gene KTN1, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-220ENST00000555172 AEBP2Q6ZN18 517 aaPredicted RBP18.53■□□□□ 0.56
KTN1-220ENST00000555172 CHIC1Q5VXU3 224 aa17.24■□□□□ 0.35
KTN1-220ENST00000555172 SENP3Q9H4L4 574 aaPredicted RBP15.86■□□□□ 0.13
KTN1-220ENST00000555172 PHF23Q9BUL5 403 aaPredicted RBP15.55■□□□□ 0.08
KTN1-220ENST00000555172 POTEDQ86YR6 584 aa14.85□□□□□ -0.03
KTN1-220ENST00000555172 FOXD1Q16676 465 aa14.77□□□□□ -0.04
KTN1-220ENST00000555172 MSH5O43196 834 aa14.2□□□□□ -0.14
KTN1-220ENST00000555172 PIAS4Q8N2W9 510 aaPredicted RBP13.71□□□□□ -0.21
KTN1-220ENST00000555172 PPP6R1Q9UPN7 881 aa13.67□□□□□ -0.22
KTN1-220ENST00000555172 ADRA2BP18089 450 aa13.6□□□□□ -0.23
KTN1-220ENST00000555172 PLPPR3Q6T4P5 718 aa13.6□□□□□ -0.23
KTN1-220ENST00000555172 MAPK8IP2Q13387 824 aaPredicted RBP12.61□□□□□ -0.39
KTN1-220ENST00000555172 CACNB1Q02641 598 aaPredicted RBP12.54□□□□□ -0.4
KTN1-220ENST00000555172 DMRT2Q9Y5R5 561 aa12.43□□□□□ -0.42
KTN1-220ENST00000555172 SCAF1Q9H7N4 1312 aaKnown RBP12.26□□□□□ -0.45
KTN1-220ENST00000555172 DCAF8L1A6NGE4 600 aa12.03□□□□□ -0.48
KTN1-220ENST00000555172 RNF39Q9H2S5 420 aa11.96□□□□□ -0.49
KTN1-220ENST00000555172 PPP4R3CPQ6ZMV5 832 aa11.95□□□□□ -0.5
KTN1-220ENST00000555172 HOXD11P31277 338 aaPredicted RBP11.85□□□□□ -0.51
KTN1-220ENST00000555172 C1QBPQ07021 282 aaKnown RBP11.83□□□□□ -0.52
KTN1-220ENST00000555172 CNKSR2Q8WXI2 1034 aa11.72□□□□□ -0.53
KTN1-220ENST00000555172 RNF216Q9NWF9 866 aaPredicted RBP11.68□□□□□ -0.54
KTN1-220ENST00000555172 DNAJC5BQ9UF47 199 aa11.54□□□□□ -0.56
KTN1-220ENST00000555172 POTEHQ6S545 545 aa11.54□□□□□ -0.56
KTN1-220ENST00000555172 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.34□□□□□ -0.596e-7■□□□□ 9.4
KTN1-220ENST00000555172 NCBP3Q53F19 620 aaKnown RBP11.3□□□□□ -0.6
KTN1-220ENST00000555172 NPM3O75607 178 aaKnown RBP11.25□□□□□ -0.61
KTN1-220ENST00000555172 U3KPZ7 1027 aaPredicted RBP11.09□□□□□ -0.63
KTN1-220ENST00000555172 SPINK5Q9NQ38 1064 aaPredicted RBP11.07□□□□□ -0.64
KTN1-220ENST00000555172 CAPN15O75808 1086 aa11.01□□□□□ -0.65
KTN1-220ENST00000555172 DSG3P32926 999 aa10.99□□□□□ -0.65
KTN1-220ENST00000555172 SLC4A2P04920 1241 aa10.85□□□□□ -0.67
KTN1-220ENST00000555172 KCNA4P22459 653 aa10.84□□□□□ -0.67
KTN1-220ENST00000555172 TRHP20396 242 aaPredicted RBP10.8□□□□□ -0.68
KTN1-220ENST00000555172 ABCB7O75027 752 aa10.79□□□□□ -0.68
KTN1-220ENST00000555172 APLP2Q06481 763 aa10.67□□□□□ -0.7
KTN1-220ENST00000555172 ZNF219Q9P2Y4 722 aaPredicted RBP10.63□□□□□ -0.71
KTN1-220ENST00000555172 RBM42Q9BTD8 480 aaKnown RBP10.63□□□□□ -0.71
KTN1-220ENST00000555172 CHRDL2Q6WN34 429 aa10.55□□□□□ -0.72
KTN1-220ENST00000555172 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.53□□□□□ -0.72
KTN1-220ENST00000555172 HNRNPUL2Q1KMD3 747 aaKnown RBP10.53□□□□□ -0.72
KTN1-220ENST00000555172 SP7Q8TDD2 431 aaPredicted RBP10.53□□□□□ -0.72
KTN1-220ENST00000555172 SAMD1Q6SPF0 538 aaPredicted RBP10.5□□□□□ -0.73
KTN1-220ENST00000555172 POLA2Q14181 598 aa10.43□□□□□ -0.74
KTN1-220ENST00000555172 MYCNP04198 464 aaPredicted RBP10.34□□□□□ -0.75
KTN1-220ENST00000555172 ATF5Q9Y2D1 282 aaPredicted RBP10.28□□□□□ -0.76
KTN1-220ENST00000555172 AKT1S1Q96B36 256 aa10.18□□□□□ -0.78
KTN1-220ENST00000555172 HAX1O00165 279 aa10.16□□□□□ -0.78
KTN1-220ENST00000555172 SLC4A1APQ9BWU0 796 aaKnown RBP10.12□□□□□ -0.79
KTN1-220ENST00000555172 OSCARQ8IYS5 282 aa10.12□□□□□ -0.79
KTN1-220ENST00000555172 PIP4P2Q8N4L2 257 aa10.12□□□□□ -0.79
KTN1-220ENST00000555172 REM2Q8IYK8 340 aaPredicted RBP10.1□□□□□ -0.79
KTN1-220ENST00000555172 FOXD4L1Q9NU39 408 aa10.1□□□□□ -0.79
KTN1-220ENST00000555172 PLSCR2Q9NRY7 297 aa10.04□□□□□ -0.8
KTN1-220ENST00000555172 ZBTB12Q9Y330 459 aaPredicted RBP10.03□□□□□ -0.8
KTN1-220ENST00000555172 PITPNM1O00562 1244 aa10.01□□□□□ -0.81
KTN1-220ENST00000555172 ZBTB22O15209 634 aa9.99□□□□□ -0.81
KTN1-220ENST00000555172 FXR2P51116 673 aaKnown RBP eCLIP9.97□□□□□ -0.819e-8■■■□□ 15.8
KTN1-220ENST00000555172 EVX2Q03828 476 aa9.92□□□□□ -0.82
KTN1-220ENST00000555172 LHX8Q68G74 356 aa9.86□□□□□ -0.83
KTN1-220ENST00000555172 CLEC11AQ9Y240 323 aa9.77□□□□□ -0.85
KTN1-220ENST00000555172 SPDYE2BA6NHP3 402 aa9.75□□□□□ -0.85
KTN1-220ENST00000555172 SPDYE6P0CI01 402 aa9.75□□□□□ -0.85
KTN1-220ENST00000555172 SPDYE2Q495Y8 402 aa9.75□□□□□ -0.85
KTN1-220ENST00000555172 PRKAR2AP13861 404 aaKnown RBP9.75□□□□□ -0.85
KTN1-220ENST00000555172 MKRN4PQ13434 485 aaPredicted RBP9.75□□□□□ -0.85
KTN1-220ENST00000555172 ATXN8OSP0DMR3 200 aa9.74□□□□□ -0.85
KTN1-220ENST00000555172 FBLN2P98095 1184 aa9.74□□□□□ -0.85
KTN1-220ENST00000555172 C19orf67A6NJJ6 358 aa9.69□□□□□ -0.86
KTN1-220ENST00000555172 GABBR2O75899 941 aa9.68□□□□□ -0.86
KTN1-220ENST00000555172 SPDYE1Q8NFV5 336 aaPredicted RBP9.66□□□□□ -0.86
KTN1-220ENST00000555172 ZNF692Q9BU19 519 aaPredicted RBP9.66□□□□□ -0.86
KTN1-220ENST00000555172 CHADLQ6NUI6 762 aa9.66□□□□□ -0.86
KTN1-220ENST00000555172 SSUH2Q9Y2M2 353 aa9.63□□□□□ -0.87
KTN1-220ENST00000555172 PABPN1Q86U42 306 aaKnown RBP eCLIP9.54□□□□□ -0.88
KTN1-220ENST00000555172 PRR29P0C7W0 189 aa9.51□□□□□ -0.89
KTN1-220ENST00000555172 CLCN6P51797 869 aa9.51□□□□□ -0.89
KTN1-220ENST00000555172 POTEIP0CG38 1075 aa9.44□□□□□ -0.9
KTN1-220ENST00000555172 EHMT2Q96KQ7 1210 aa9.43□□□□□ -0.9
KTN1-220ENST00000555172 CD44P16070 742 aaKnown RBP9.41□□□□□ -0.9
KTN1-220ENST00000555172 FARP1Q9Y4F1 1045 aaPredicted RBP9.39□□□□□ -0.91
KTN1-220ENST00000555172 DCBLD2Q96PD2 775 aa9.37□□□□□ -0.91
KTN1-220ENST00000555172 PCDH10Q9P2E7 1040 aa9.35□□□□□ -0.91
KTN1-220ENST00000555172 POTEMA6NI47 508 aa9.3□□□□□ -0.92
KTN1-220ENST00000555172 POTEGQ6S5H5 508 aa9.26□□□□□ -0.93
KTN1-220ENST00000555172 CSRNP3Q8WYN3 585 aa9.26□□□□□ -0.93
KTN1-220ENST00000555172 ZRANB1Q9UGI0 708 aa9.25□□□□□ -0.93
KTN1-220ENST00000555172 CREBZFQ9NS37 354 aa9.24□□□□□ -0.93
KTN1-220ENST00000555172 OTUD5Q96G74 571 aa9.21□□□□□ -0.93
KTN1-220ENST00000555172 GALR2O43603 387 aaPredicted RBP9.21□□□□□ -0.94
KTN1-220ENST00000555172 ZNF579Q8NAF0 562 aaKnown RBP9.2□□□□□ -0.94
KTN1-220ENST00000555172 POTEB2H3BUK9 544 aa9.15□□□□□ -0.95
KTN1-220ENST00000555172 PHF12Q96QT6 1004 aa9.14□□□□□ -0.95
KTN1-220ENST00000555172 SPDYE4A6NLX3 237 aa9.1□□□□□ -0.95
KTN1-220ENST00000555172 STAG3Q9UJ98 1225 aa9.09□□□□□ -0.95
KTN1-220ENST00000555172 PELP1Q8IZL8 1130 aaKnown RBP9.08□□□□□ -0.96
KTN1-220ENST00000555172 MAMSTRQ6ZN01 415 aa9.05□□□□□ -0.96
KTN1-220ENST00000555172 MNX1P50219 401 aaPredicted RBP9.04□□□□□ -0.96
KTN1-220ENST00000555172 PAK3O75914 559 aaPredicted RBP9.02□□□□□ -0.97
KTN1-220ENST00000555172 MS4A3Q96HJ5 214 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms