RNA–Protein interactions for RNA: ENST00000404125.5

PSME4-202, Transcript of proteasome activator subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSME4, Length 7,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-202ENST00000404125 DCAF8L2P0C7V8 631 aa25.2■■□□□ 1.62
PSME4-202ENST00000404125 EHMT2Q96KQ7 1210 aa23.56■■□□□ 1.36
PSME4-202ENST00000404125 SUPT5HO00267 1087 aaKnown RBP23.47■■□□□ 1.35
PSME4-202ENST00000404125 SHROOM4Q9ULL8 1493 aa23.45■■□□□ 1.34
PSME4-202ENST00000404125 NISCHQ9Y2I1 1504 aa22.98■■□□□ 1.27
PSME4-202ENST00000404125 TTBK1Q5TCY1 1321 aaPredicted RBP22.55■■□□□ 1.2
PSME4-202ENST00000404125 FAM9AQ8IZU1 332 aaPredicted RBP22.36■■□□□ 1.17
PSME4-202ENST00000404125 RANGAP1P46060 587 aaPredicted RBP22.34■■□□□ 1.17
PSME4-202ENST00000404125 ATP1B4Q9UN42 357 aaPredicted RBP21.83■■□□□ 1.09
PSME4-202ENST00000404125 PPARGC1BQ86YN6 1023 aaKnown RBP21.64■■□□□ 1.05
PSME4-202ENST00000404125 APLP2Q06481 763 aa21.63■■□□□ 1.05
PSME4-202ENST00000404125 PCGF6Q9BYE7 350 aa21.54■■□□□ 1.04
PSME4-202ENST00000404125 TRIM41Q8WV44 630 aa21.33■■□□□ 1
PSME4-202ENST00000404125 UBTFP17480 764 aaKnown RBP21.26■□□□□ 0.99
PSME4-202ENST00000404125 CHIC1Q5VXU3 224 aa21.1■□□□□ 0.97
PSME4-202ENST00000404125 CCER1Q8TC90 406 aaPredicted RBP21.02■□□□□ 0.96
PSME4-202ENST00000404125 ITGAEP38570 1179 aa21■□□□□ 0.95
PSME4-202ENST00000404125 CNGB1Q14028 1251 aaPredicted RBP20.96■□□□□ 0.95
PSME4-202ENST00000404125 MYT1LQ9UL68 1186 aa20.92■□□□□ 0.94
PSME4-202ENST00000404125 YTHDC1Q96MU7 727 aaKnown RBP20.92■□□□□ 0.94
PSME4-202ENST00000404125 PABPN1Q86U42 306 aaKnown RBP eCLIP20.92■□□□□ 0.94
PSME4-202ENST00000404125 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.89■□□□□ 0.93
PSME4-202ENST00000404125 HNRNPUL2Q1KMD3 747 aaKnown RBP20.89■□□□□ 0.93
PSME4-202ENST00000404125 LOC105371045A0A1W2PR82 267 aa20.86■□□□□ 0.93
PSME4-202ENST00000404125 POLR3GLQ9BT43 218 aa20.76■□□□□ 0.91
PSME4-202ENST00000404125 ABCC9O60706 1549 aa20.75■□□□□ 0.91
PSME4-202ENST00000404125 PELP1Q8IZL8 1130 aaKnown RBP20.5■□□□□ 0.87
PSME4-202ENST00000404125 SLC4A1APQ9BWU0 796 aaKnown RBP20.4■□□□□ 0.86
PSME4-202ENST00000404125 ARID3CA6NKF2 412 aa20.38■□□□□ 0.85
PSME4-202ENST00000404125 FBLN2P98095 1184 aa20.36■□□□□ 0.85
PSME4-202ENST00000404125 ERICH6Q7L0X2 663 aa20.26■□□□□ 0.83
PSME4-202ENST00000404125 FAM50AQ14320 339 aaKnown RBP20.19■□□□□ 0.82
PSME4-202ENST00000404125 CENPBP07199 599 aaPredicted RBP20.17■□□□□ 0.82
PSME4-202ENST00000404125 PLPPR3Q6T4P5 718 aa20.16■□□□□ 0.82
PSME4-202ENST00000404125 P3H3Q8IVL6 736 aa20.15■□□□□ 0.82
PSME4-202ENST00000404125 TRIM26Q12899 539 aaPredicted RBP20.09■□□□□ 0.81
PSME4-202ENST00000404125 ZEB1P37275 1124 aaPredicted RBP20.08■□□□□ 0.8
PSME4-202ENST00000404125 NEUROD1Q13562 356 aa20.07■□□□□ 0.8
PSME4-202ENST00000404125 NEFLP07196 543 aa20■□□□□ 0.79
PSME4-202ENST00000404125 TRIM52Q96A61 297 aa20■□□□□ 0.79
PSME4-202ENST00000404125 ZNF326Q5BKZ1 582 aaKnown RBP19.99■□□□□ 0.79
PSME4-202ENST00000404125 BCL11AQ9H165 835 aa19.95■□□□□ 0.79
PSME4-202ENST00000404125 HRCP23327 699 aa19.9■□□□□ 0.78
PSME4-202ENST00000404125 SENP3Q9H4L4 574 aaPredicted RBP19.88■□□□□ 0.77
PSME4-202ENST00000404125 SCRIBQ14160 1630 aa19.83■□□□□ 0.76
PSME4-202ENST00000404125 BCANQ96GW7 911 aa19.78■□□□□ 0.76
PSME4-202ENST00000404125 MYT1Q01538 1121 aa19.78■□□□□ 0.76
PSME4-202ENST00000404125 SLC24A1O60721 1099 aa19.77■□□□□ 0.76
PSME4-202ENST00000404125 ZNF777Q9ULD5 760 aaPredicted RBP19.76■□□□□ 0.75
PSME4-202ENST00000404125 PLEKHG5O94827 1062 aa19.57■□□□□ 0.72
PSME4-202ENST00000404125 DIEXFQ68CQ4 756 aaKnown RBP19.54■□□□□ 0.72
PSME4-202ENST00000404125 DAXXQ9UER7 740 aaPredicted RBP19.49■□□□□ 0.71
PSME4-202ENST00000404125 CLSPNQ9HAW4 1339 aa19.47■□□□□ 0.71
PSME4-202ENST00000404125 CHGAP10645 457 aaKnown RBP19.47■□□□□ 0.71
PSME4-202ENST00000404125 CHIC2Q9UKJ5 165 aa19.38■□□□□ 0.69
PSME4-202ENST00000404125 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.37■□□□□ 0.698e-7■□□□□ 10.9
PSME4-202ENST00000404125 SALL2Q9Y467 1007 aaPredicted RBP19.31■□□□□ 0.68
PSME4-202ENST00000404125 SENP3-EIF4A1A0A087X0R7 540 aa19.3■□□□□ 0.68
PSME4-202ENST00000404125 HIRIP3Q9BW71 556 aaPredicted RBP19.27■□□□□ 0.67
PSME4-202ENST00000404125 STAG3Q9UJ98 1225 aa19.24■□□□□ 0.67
PSME4-202ENST00000404125 CSRNP3Q8WYN3 585 aa19.23■□□□□ 0.67
PSME4-202ENST00000404125 SCAF1Q9H7N4 1312 aaKnown RBP19.22■□□□□ 0.67
PSME4-202ENST00000404125 ESF1Q9H501 851 aaKnown RBP19.18■□□□□ 0.66
PSME4-202ENST00000404125 KCNH8Q96L42 1107 aa19.18■□□□□ 0.66
PSME4-202ENST00000404125 KDM2AQ9Y2K7 1162 aa19.16■□□□□ 0.66
PSME4-202ENST00000404125 ANP32CO43423 234 aa19.15■□□□□ 0.66
PSME4-202ENST00000404125 ZCCHC6Q5VYS8 1495 aaKnown RBP19.14■□□□□ 0.66
PSME4-202ENST00000404125 A0A0G2JS52 829 aa19.14■□□□□ 0.65
PSME4-202ENST00000404125 ZNF316A6NFI3 1004 aaPredicted RBP19.13■□□□□ 0.65
PSME4-202ENST00000404125 ZBTB7CA1YPR0 619 aa19.12■□□□□ 0.65
PSME4-202ENST00000404125 CANXP27824 592 aaKnown RBP19.11■□□□□ 0.65
PSME4-202ENST00000404125 GTF3C3Q9Y5Q9 886 aa19.11■□□□□ 0.65
PSME4-202ENST00000404125 CHMP7Q8WUX9 453 aaPredicted RBP19.06■□□□□ 0.64
PSME4-202ENST00000404125 NPM1P06748 294 aaKnown RBP eCLIP19.05■□□□□ 0.64
PSME4-202ENST00000404125 FAM9BQ8IZU0 186 aa18.99■□□□□ 0.63
PSME4-202ENST00000404125 NPM2Q86SE8 214 aaKnown RBP18.98■□□□□ 0.63
PSME4-202ENST00000404125 DDX10Q13206 875 aaKnown RBP18.97■□□□□ 0.63
PSME4-202ENST00000404125 RRP7BPQ9NSQ0 103 aa18.97■□□□□ 0.63
PSME4-202ENST00000404125 ZBTB47Q9UFB7 747 aaPredicted RBP18.91■□□□□ 0.62
PSME4-202ENST00000404125 C14orf37Q86TY3 774 aa18.91■□□□□ 0.62
PSME4-202ENST00000404125 CDK11AQ9UQ88 783 aaPredicted RBP18.88■□□□□ 0.61
PSME4-202ENST00000404125 RGL3Q3MIN7 710 aa18.88■□□□□ 0.61
PSME4-202ENST00000404125 IRX6P78412 446 aaPredicted RBP18.87■□□□□ 0.61
PSME4-202ENST00000404125 ARID4BQ4LE39 1312 aaPredicted RBP18.87■□□□□ 0.61
PSME4-202ENST00000404125 DCAF1Q9Y4B6 1507 aa18.86■□□□□ 0.61
PSME4-202ENST00000404125 NEFMP07197 916 aa18.84■□□□□ 0.61
PSME4-202ENST00000404125 MYO15BQ96JP2 1530 aa18.83■□□□□ 0.6
PSME4-202ENST00000404125 CCDC180Q9P1Z9 1646 aa18.82■□□□□ 0.6
PSME4-202ENST00000404125 TONSLQ96HA7 1378 aa18.8■□□□□ 0.6
PSME4-202ENST00000404125 TRHP20396 242 aaPredicted RBP18.77■□□□□ 0.6
PSME4-202ENST00000404125 RTL5Q5HYW3 569 aaPredicted RBP18.77■□□□□ 0.6
PSME4-202ENST00000404125 HNRNPUQ00839 825 aaKnown RBP eCLIP18.75■□□□□ 0.59
PSME4-202ENST00000404125 MLECQ14165 292 aa18.73■□□□□ 0.59
PSME4-202ENST00000404125 FKBP8Q14318 412 aa18.73■□□□□ 0.59
PSME4-202ENST00000404125 ERCC6Q03468 1493 aa18.72■□□□□ 0.59
PSME4-202ENST00000404125 MTUS2Q5JR59 1369 aa18.72■□□□□ 0.59
PSME4-202ENST00000404125 TMC1Q8TDI8 760 aa18.69■□□□□ 0.58
PSME4-202ENST00000404125 RB1CC1Q8TDY2 1594 aa18.69■□□□□ 0.58
PSME4-202ENST00000404125 PPM1GO15355 546 aaPredicted RBP18.68■□□□□ 0.58
PSME4-202ENST00000404125 TSPY4P0CV99 314 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms