RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 NISCHQ9Y2I1 1504 aa13.03□□□□□ -0.32
PRPF4B-201ENST00000337659 CCDC180Q9P1Z9 1646 aa11.72□□□□□ -0.53
PRPF4B-201ENST00000337659 DCAF1Q9Y4B6 1507 aa11.16□□□□□ -0.62
PRPF4B-201ENST00000337659 MYO15BQ96JP2 1530 aa11.08□□□□□ -0.64
PRPF4B-201ENST00000337659 ZCCHC6Q5VYS8 1495 aaKnown RBP11.07□□□□□ -0.64
PRPF4B-201ENST00000337659 NACADO15069 1562 aa10.68□□□□□ -0.7
PRPF4B-201ENST00000337659 ABCC9O60706 1549 aa10.63□□□□□ -0.71
PRPF4B-201ENST00000337659 SHROOM4Q9ULL8 1493 aa10.6□□□□□ -0.71
PRPF4B-201ENST00000337659 RB1CC1Q8TDY2 1594 aa10.59□□□□□ -0.71
PRPF4B-201ENST00000337659 UNC13AQ9UPW8 1703 aa10.53□□□□□ -0.72
PRPF4B-201ENST00000337659 BICRAQ9NZM4 1560 aa10.35□□□□□ -0.75
PRPF4B-201ENST00000337659 PEG3Q9GZU2 1588 aa10.23□□□□□ -0.77
PRPF4B-201ENST00000337659 SCRIBQ14160 1630 aa10.18□□□□□ -0.78
PRPF4B-201ENST00000337659 EIF4G1Q04637 1599 aaKnown RBP10.09□□□□□ -0.79
PRPF4B-201ENST00000337659 BAZ1AQ9NRL2 1556 aaPredicted RBP10.08□□□□□ -0.8
PRPF4B-201ENST00000337659 DNAJC5BQ9UF47 199 aa10.06□□□□□ -0.8
PRPF4B-201ENST00000337659 SMARCA4P51532 1647 aa10.06□□□□□ -0.8
PRPF4B-201ENST00000337659 CC2D2AQ9P2K1 1620 aa9.98□□□□□ -0.81
PRPF4B-201ENST00000337659 SMARCA2P51531 1590 aa9.98□□□□□ -0.81
PRPF4B-201ENST00000337659 RSF1Q96T23 1441 aaPredicted RBP9.97□□□□□ -0.81
PRPF4B-201ENST00000337659 TOP2AP11388 1531 aaKnown RBP9.95□□□□□ -0.82
PRPF4B-201ENST00000337659 MROH2BQ7Z745 1585 aa9.93□□□□□ -0.82
PRPF4B-201ENST00000337659 HMGXB3Q12766 1538 aa9.91□□□□□ -0.82
PRPF4B-201ENST00000337659 PRDM2Q13029 1718 aa9.89□□□□□ -0.83
PRPF4B-201ENST00000337659 WIZO95785 1651 aa9.88□□□□□ -0.83
PRPF4B-201ENST00000337659 CECR2Q9BXF3 1484 aa9.86□□□□□ -0.83
PRPF4B-201ENST00000337659 CUX2O14529 1486 aa9.79□□□□□ -0.84
PRPF4B-201ENST00000337659 NCAPD3P42695 1498 aa9.76□□□□□ -0.85
PRPF4B-201ENST00000337659 ATAD2BQ9ULI0 1458 aa9.73□□□□□ -0.85
PRPF4B-201ENST00000337659 BIVM-ERCC5R4GMW8 1640 aa9.66□□□□□ -0.86
PRPF4B-201ENST00000337659 CCDC88BA6NC98 1476 aa9.62□□□□□ -0.87
PRPF4B-201ENST00000337659 THOC2Q8NI27 1593 aaKnown RBP9.62□□□□□ -0.87
PRPF4B-201ENST00000337659 DNAJC5Q9H3Z4 198 aa9.57□□□□□ -0.88
PRPF4B-201ENST00000337659 LAMC3Q9Y6N6 1575 aa9.56□□□□□ -0.88
PRPF4B-201ENST00000337659 BAZ1BQ9UIG0 1483 aaKnown RBP9.55□□□□□ -0.88
PRPF4B-201ENST00000337659 PABPN1Q86U42 306 aaKnown RBP eCLIP9.54□□□□□ -0.88
PRPF4B-201ENST00000337659 TOP2BQ02880 1626 aa9.52□□□□□ -0.88
PRPF4B-201ENST00000337659 CFTRP13569 1480 aa9.52□□□□□ -0.89
PRPF4B-201ENST00000337659 WDR97A6NE52 1622 aa9.5□□□□□ -0.89
PRPF4B-201ENST00000337659 DCAF8L2P0C7V8 631 aa9.49□□□□□ -0.89
PRPF4B-201ENST00000337659 SYNJ1O43426 1573 aa9.43□□□□□ -0.9
PRPF4B-201ENST00000337659 WDR62O43379 1518 aa9.42□□□□□ -0.9
PRPF4B-201ENST00000337659 KIF21BO75037 1637 aa9.41□□□□□ -0.9
PRPF4B-201ENST00000337659 KIF21AQ7Z4S6 1674 aa9.39□□□□□ -0.91
PRPF4B-201ENST00000337659 EEA1Q15075 1411 aa9.39□□□□□ -0.91
PRPF4B-201ENST00000337659 CHIC1Q5VXU3 224 aa9.38□□□□□ -0.91
PRPF4B-201ENST00000337659 CUX1P39880 1505 aa9.34□□□□□ -0.91
PRPF4B-201ENST00000337659 DNMBPQ6XZF7 1577 aa9.34□□□□□ -0.91
PRPF4B-201ENST00000337659 ERICH3Q5RHP9 1530 aa9.33□□□□□ -0.92
PRPF4B-201ENST00000337659 ABCC8Q09428 1581 aa9.3□□□□□ -0.92
PRPF4B-201ENST00000337659 SUPT5HO00267 1087 aaKnown RBP9.3□□□□□ -0.92
PRPF4B-201ENST00000337659 ABCA5Q8WWZ7 1642 aa9.29□□□□□ -0.92
PRPF4B-201ENST00000337659 CADPSQ9ULU8 1353 aa9.28□□□□□ -0.92
PRPF4B-201ENST00000337659 WRNQ14191 1432 aaPredicted RBP eCLIP9.27□□□□□ -0.93
PRPF4B-201ENST00000337659 TARBP1Q13395 1621 aaKnown RBP9.26□□□□□ -0.93
PRPF4B-201ENST00000337659 CUL7Q14999 1698 aa9.24□□□□□ -0.93
PRPF4B-201ENST00000337659 MRC2Q9UBG0 1479 aa9.24□□□□□ -0.93
PRPF4B-201ENST00000337659 ABCA10Q8WWZ4 1543 aa9.23□□□□□ -0.93
PRPF4B-201ENST00000337659 PRXQ9BXM0 1461 aa9.21□□□□□ -0.93
PRPF4B-201ENST00000337659 PDS5BQ9NTI5 1447 aa9.21□□□□□ -0.94
PRPF4B-201ENST00000337659 ERCC6Q03468 1493 aa9.2□□□□□ -0.94
PRPF4B-201ENST00000337659 TOPBP1Q92547 1522 aa9.18□□□□□ -0.94
PRPF4B-201ENST00000337659 FANCD2Q9BXW9 1451 aa9.17□□□□□ -0.94
PRPF4B-201ENST00000337659 PBRM1Q86U86 1689 aa9.17□□□□□ -0.94
PRPF4B-201ENST00000337659 URB2Q14146 1524 aaKnown RBP9.16□□□□□ -0.94
PRPF4B-201ENST00000337659 CTTNBP2Q8WZ74 1663 aa9.15□□□□□ -0.94
PRPF4B-201ENST00000337659 NESP48681 1621 aa9.15□□□□□ -0.94
PRPF4B-201ENST00000337659 CEP164Q9UPV0 1460 aa9.13□□□□□ -0.95
PRPF4B-201ENST00000337659 POLA1P09884 1462 aaPredicted RBP9.1□□□□□ -0.95
PRPF4B-201ENST00000337659 GOLGA3Q08378 1498 aa9.1□□□□□ -0.95
PRPF4B-201ENST00000337659 FGD5Q6ZNL6 1462 aa9.1□□□□□ -0.95
PRPF4B-201ENST00000337659 TNIKQ9UKE5 1360 aa9.09□□□□□ -0.95
PRPF4B-201ENST00000337659 SAMD9Q5K651 1589 aa9.09□□□□□ -0.95
PRPF4B-201ENST00000337659 MAP3K1Q13233 1512 aa9.08□□□□□ -0.96
PRPF4B-201ENST00000337659 ADAMTS12P58397 1594 aa9.07□□□□□ -0.96
PRPF4B-201ENST00000337659 SOGA1O94964 1423 aa9.07□□□□□ -0.96
PRPF4B-201ENST00000337659 RUSC2Q8N2Y8 1516 aa9.06□□□□□ -0.96
PRPF4B-201ENST00000337659 RIMBP3CA6NJZ7 1639 aa9.05□□□□□ -0.96
PRPF4B-201ENST00000337659 RIMBP3BA6NNM3 1639 aa9.05□□□□□ -0.96
PRPF4B-201ENST00000337659 RIMBP3Q9UFD9 1639 aa9.05□□□□□ -0.96
PRPF4B-201ENST00000337659 CFAP43Q8NDM7 1665 aa9.04□□□□□ -0.96
PRPF4B-201ENST00000337659 EFCAB5A4FU69 1503 aa9.04□□□□□ -0.96
PRPF4B-201ENST00000337659 KIF27Q86VH2 1401 aa9.02□□□□□ -0.97
PRPF4B-201ENST00000337659 IFT140Q96RY7 1462 aa9.01□□□□□ -0.97
PRPF4B-201ENST00000337659 AQRO60306 1485 aaKnown RBP eCLIP9□□□□□ -0.972e-7■■■■■ 112.1
PRPF4B-201ENST00000337659 CLASP1Q7Z460 1538 aa9□□□□□ -0.97
PRPF4B-201ENST00000337659 EIF4G3O43432 1585 aaKnown RBP8.99□□□□□ -0.97
PRPF4B-201ENST00000337659 SHROOM2Q13796 1616 aa8.97□□□□□ -0.97
PRPF4B-201ENST00000337659 CHD1O14646 1710 aa8.97□□□□□ -0.97
PRPF4B-201ENST00000337659 IGF1RP08069 1367 aa8.96□□□□□ -0.97
PRPF4B-201ENST00000337659 RAPGEF2Q9Y4G8 1499 aa8.96□□□□□ -0.97
PRPF4B-201ENST00000337659 TRIM41Q8WV44 630 aa8.96□□□□□ -0.98
PRPF4B-201ENST00000337659 LRRIQ1Q96JM4 1722 aa8.95□□□□□ -0.98
PRPF4B-201ENST00000337659 ARAP1Q96P48 1450 aa8.95□□□□□ -0.98
PRPF4B-201ENST00000337659 UGGT2Q9NYU1 1516 aa8.94□□□□□ -0.98
PRPF4B-201ENST00000337659 MAGI1Q96QZ7 1491 aaPredicted RBP8.92□□□□□ -0.98
PRPF4B-201ENST00000337659 CEP162Q5TB80 1403 aa8.92□□□□□ -0.98
PRPF4B-201ENST00000337659 ARHGEF11O15085 1522 aa8.91□□□□□ -0.98
PRPF4B-201ENST00000337659 GAPVD1Q14C86 1478 aa8.89□□□□□ -0.99
PRPF4B-201ENST00000337659 CSRNP3Q8WYN3 585 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms