RNA–Protein interactions for RNA: ENST00000598389.5

FARP1-224, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-224ENST00000598389 AEBP2Q6ZN18 517 aaPredicted RBP26.06■■□□□ 1.76
FARP1-224ENST00000598389 CHIC1Q5VXU3 224 aa25.18■■□□□ 1.62
FARP1-224ENST00000598389 PHF23Q9BUL5 403 aaPredicted RBP22.13■■□□□ 1.13
FARP1-224ENST00000598389 SENP3Q9H4L4 574 aaPredicted RBP22.13■■□□□ 1.13
FARP1-224ENST00000598389 FOXD1Q16676 465 aa20.59■□□□□ 0.89
FARP1-224ENST00000598389 PLPPR3Q6T4P5 718 aa20.3■□□□□ 0.84
FARP1-224ENST00000598389 PPP6R1Q9UPN7 881 aa19.62■□□□□ 0.73
FARP1-224ENST00000598389 ADRA2BP18089 450 aa19.54■□□□□ 0.72
FARP1-224ENST00000598389 PIAS4Q8N2W9 510 aaPredicted RBP19.29■□□□□ 0.68
FARP1-224ENST00000598389 MSH5O43196 834 aa19.07■□□□□ 0.64
FARP1-224ENST00000598389 POTEDQ86YR6 584 aa18.18■□□□□ 0.5
FARP1-224ENST00000598389 SCAF1Q9H7N4 1312 aaKnown RBP17.88■□□□□ 0.45
FARP1-224ENST00000598389 PPP4R3CPQ6ZMV5 832 aa17.86■□□□□ 0.45
FARP1-224ENST00000598389 MAPK8IP2Q13387 824 aaPredicted RBP17.83■□□□□ 0.44
FARP1-224ENST00000598389 DMRT2Q9Y5R5 561 aa17.64■□□□□ 0.41
FARP1-224ENST00000598389 CNKSR2Q8WXI2 1034 aa17.42■□□□□ 0.38
FARP1-224ENST00000598389 NCBP3Q53F19 620 aaKnown RBP17.29■□□□□ 0.36
FARP1-224ENST00000598389 HOXD11P31277 338 aaPredicted RBP17.19■□□□□ 0.34
FARP1-224ENST00000598389 RNF216Q9NWF9 866 aaPredicted RBP17.16■□□□□ 0.34
FARP1-224ENST00000598389 KCNA4P22459 653 aa17.12■□□□□ 0.33
FARP1-224ENST00000598389 NPM3O75607 178 aaKnown RBP17.06■□□□□ 0.32
FARP1-224ENST00000598389 DCAF8L1A6NGE4 600 aa16.78■□□□□ 0.28
FARP1-224ENST00000598389 DNAJC5BQ9UF47 199 aa16.71■□□□□ 0.27
FARP1-224ENST00000598389 RNF39Q9H2S5 420 aa16.34■□□□□ 0.21
FARP1-224ENST00000598389 NISCHQ9Y2I1 1504 aa16.33■□□□□ 0.2
FARP1-224ENST00000598389 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.3■□□□□ 0.21e-11■□□□□ 9.2
FARP1-224ENST00000598389 SLC4A1APQ9BWU0 796 aaKnown RBP16.23■□□□□ 0.19
FARP1-224ENST00000598389 SLC4A2P04920 1241 aa16.21■□□□□ 0.19
FARP1-224ENST00000598389 C1QBPQ07021 282 aaKnown RBP16.13■□□□□ 0.17
FARP1-224ENST00000598389 ABCC9O60706 1549 aa16.1■□□□□ 0.17
FARP1-224ENST00000598389 CACNB1Q02641 598 aaPredicted RBP16.05■□□□□ 0.16
FARP1-224ENST00000598389 U3KPZ7 1027 aaPredicted RBP16.05■□□□□ 0.16
FARP1-224ENST00000598389 FOXD4L1Q9NU39 408 aa15.83■□□□□ 0.12
FARP1-224ENST00000598389 ZBTB22O15209 634 aa15.77■□□□□ 0.12
FARP1-224ENST00000598389 MYCNP04198 464 aaPredicted RBP15.75■□□□□ 0.11
FARP1-224ENST00000598389 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.73■□□□□ 0.11
FARP1-224ENST00000598389 HNRNPUL2Q1KMD3 747 aaKnown RBP15.73■□□□□ 0.11
FARP1-224ENST00000598389 SAMD1Q6SPF0 538 aaPredicted RBP15.67■□□□□ 0.1
FARP1-224ENST00000598389 SPINK5Q9NQ38 1064 aaPredicted RBP15.67■□□□□ 0.1
FARP1-224ENST00000598389 DNAJC5Q9H3Z4 198 aa15.62■□□□□ 0.09
FARP1-224ENST00000598389 APLP2Q06481 763 aa15.61■□□□□ 0.09
FARP1-224ENST00000598389 CAPN15O75808 1086 aa15.57■□□□□ 0.08
FARP1-224ENST00000598389 CSRNP3Q8WYN3 585 aa15.46■□□□□ 0.07
FARP1-224ENST00000598389 DSG3P32926 999 aa15.45■□□□□ 0.06
FARP1-224ENST00000598389 ZNF219Q9P2Y4 722 aaPredicted RBP15.45■□□□□ 0.06
FARP1-224ENST00000598389 TRHP20396 242 aaPredicted RBP15.43■□□□□ 0.06
FARP1-224ENST00000598389 EHMT2Q96KQ7 1210 aa15.4■□□□□ 0.06
FARP1-224ENST00000598389 ATF5Q9Y2D1 282 aaPredicted RBP15.37■□□□□ 0.05
FARP1-224ENST00000598389 ATXN8OSP0DMR3 200 aa15.35■□□□□ 0.05
FARP1-224ENST00000598389 ABCB7O75027 752 aa15.25■□□□□ 0.03
FARP1-224ENST00000598389 POLA2Q14181 598 aa15.17■□□□□ 0.02
FARP1-224ENST00000598389 CCDC180Q9P1Z9 1646 aa15.16■□□□□ 0.02
FARP1-224ENST00000598389 RB1CC1Q8TDY2 1594 aa14.89□□□□□ -0.03
FARP1-224ENST00000598389 ZBTB12Q9Y330 459 aaPredicted RBP14.88□□□□□ -0.03
FARP1-224ENST00000598389 PABPN1Q86U42 306 aaKnown RBP eCLIP14.76□□□□□ -0.05
FARP1-224ENST00000598389 MKRN4PQ13434 485 aaPredicted RBP14.71□□□□□ -0.05
FARP1-224ENST00000598389 FBLN2P98095 1184 aa14.7□□□□□ -0.06
FARP1-224ENST00000598389 RBM42Q9BTD8 480 aaKnown RBP14.69□□□□□ -0.06
FARP1-224ENST00000598389 CECR2Q9BXF3 1484 aa14.65□□□□□ -0.06
FARP1-224ENST00000598389 OSCARQ8IYS5 282 aa14.64□□□□□ -0.07
FARP1-224ENST00000598389 BICRAQ9NZM4 1560 aa14.62□□□□□ -0.07
FARP1-224ENST00000598389 UNC13AQ9UPW8 1703 aa14.61□□□□□ -0.07
FARP1-224ENST00000598389 NACADO15069 1562 aa14.56□□□□□ -0.08
FARP1-224ENST00000598389 CC2D2AQ9P2K1 1620 aa14.56□□□□□ -0.08
FARP1-224ENST00000598389 SPDYE2BA6NHP3 402 aa14.49□□□□□ -0.09
FARP1-224ENST00000598389 SPDYE6P0CI01 402 aa14.49□□□□□ -0.09
FARP1-224ENST00000598389 SPDYE2Q495Y8 402 aa14.49□□□□□ -0.09
FARP1-224ENST00000598389 AKT1S1Q96B36 256 aa14.48□□□□□ -0.09
FARP1-224ENST00000598389 CUX2O14529 1486 aa14.41□□□□□ -0.1
FARP1-224ENST00000598389 ZNF692Q9BU19 519 aaPredicted RBP14.36□□□□□ -0.11
FARP1-224ENST00000598389 SSUH2Q9Y2M2 353 aa14.36□□□□□ -0.11
FARP1-224ENST00000598389 REM2Q8IYK8 340 aaPredicted RBP14.34□□□□□ -0.11
FARP1-224ENST00000598389 TRIM41Q8WV44 630 aa14.3□□□□□ -0.12
FARP1-224ENST00000598389 SHROOM4Q9ULL8 1493 aa14.3□□□□□ -0.12
FARP1-224ENST00000598389 EIF4G1Q04637 1599 aaKnown RBP14.28□□□□□ -0.12
FARP1-224ENST00000598389 CHRDL2Q6WN34 429 aa14.2□□□□□ -0.14
FARP1-224ENST00000598389 SPDYE4A6NLX3 237 aa14.19□□□□□ -0.14
FARP1-224ENST00000598389 PITPNM1O00562 1244 aa14.16□□□□□ -0.14
FARP1-224ENST00000598389 SPDYE1Q8NFV5 336 aaPredicted RBP14.1□□□□□ -0.15
FARP1-224ENST00000598389 MYO15BQ96JP2 1530 aa14.1□□□□□ -0.15
FARP1-224ENST00000598389 POTEHQ6S545 545 aa14.07□□□□□ -0.16
FARP1-224ENST00000598389 PROM2Q8N271 834 aa14.01□□□□□ -0.17
FARP1-224ENST00000598389 FXR2P51116 673 aaKnown RBP eCLIP14□□□□□ -0.17
FARP1-224ENST00000598389 CLEC11AQ9Y240 323 aa14□□□□□ -0.17
FARP1-224ENST00000598389 PIP4P2Q8N4L2 257 aa13.97□□□□□ -0.17
FARP1-224ENST00000598389 DCAF8L2P0C7V8 631 aa13.93□□□□□ -0.18
FARP1-224ENST00000598389 FKBP8Q14318 412 aa13.93□□□□□ -0.18
FARP1-224ENST00000598389 ERCC6Q03468 1493 aa13.92□□□□□ -0.18
FARP1-224ENST00000598389 STAG3Q9UJ98 1225 aa13.89□□□□□ -0.19
FARP1-224ENST00000598389 PRR29P0C7W0 189 aa13.88□□□□□ -0.19
FARP1-224ENST00000598389 PRKAR2AP13861 404 aaKnown RBP13.79□□□□□ -0.2
FARP1-224ENST00000598389 THOC2Q8NI27 1593 aaKnown RBP13.74□□□□□ -0.21
FARP1-224ENST00000598389 CHADLQ6NUI6 762 aa13.72□□□□□ -0.21
FARP1-224ENST00000598389 CREBZFQ9NS37 354 aa13.68□□□□□ -0.22
FARP1-224ENST00000598389 SCRIBQ14160 1630 aa13.68□□□□□ -0.22
FARP1-224ENST00000598389 FARP1Q9Y4F1 1045 aaPredicted RBP13.6□□□□□ -0.23
FARP1-224ENST00000598389 NESP48681 1621 aa13.57□□□□□ -0.24
FARP1-224ENST00000598389 HAX1O00165 279 aa13.56□□□□□ -0.24
FARP1-224ENST00000598389 MNX1P50219 401 aaPredicted RBP13.54□□□□□ -0.24
FARP1-224ENST00000598389 FBXO3Q9UK99 471 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms