RNA–Protein interactions for RNA: ENST00000334975.13

KTN1-201, Transcript of kinectin 1, humanhuman

TSL 2

Gene KTN1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-201ENST00000334975 AEBP2Q6ZN18 517 aaPredicted RBP19.94■□□□□ 0.78
KTN1-201ENST00000334975 CHIC1Q5VXU3 224 aa19.83■□□□□ 0.76
KTN1-201ENST00000334975 PHF23Q9BUL5 403 aaPredicted RBP17.58■□□□□ 0.41
KTN1-201ENST00000334975 NISCHQ9Y2I1 1504 aa17.12■□□□□ 0.33
KTN1-201ENST00000334975 SENP3Q9H4L4 574 aaPredicted RBP16.7■□□□□ 0.26
KTN1-201ENST00000334975 PLPPR3Q6T4P5 718 aa16.27■□□□□ 0.19
KTN1-201ENST00000334975 FOXD1Q16676 465 aa15.54■□□□□ 0.08
KTN1-201ENST00000334975 ADRA2BP18089 450 aa15.38■□□□□ 0.05
KTN1-201ENST00000334975 PPP6R1Q9UPN7 881 aa15.38■□□□□ 0.05
KTN1-201ENST00000334975 CCDC180Q9P1Z9 1646 aa15.15■□□□□ 0.02
KTN1-201ENST00000334975 ABCC9O60706 1549 aa14.88□□□□□ -0.03
KTN1-201ENST00000334975 PIAS4Q8N2W9 510 aaPredicted RBP14.74□□□□□ -0.05
KTN1-201ENST00000334975 KCNA4P22459 653 aa14.7□□□□□ -0.06
KTN1-201ENST00000334975 PPP4R3CPQ6ZMV5 832 aa14.43□□□□□ -0.1
KTN1-201ENST00000334975 DCAF8L2P0C7V8 631 aa14.42□□□□□ -0.1
KTN1-201ENST00000334975 RB1CC1Q8TDY2 1594 aa14.27□□□□□ -0.12
KTN1-201ENST00000334975 ZCCHC6Q5VYS8 1495 aaKnown RBP14.25□□□□□ -0.13
KTN1-201ENST00000334975 NACADO15069 1562 aa14.25□□□□□ -0.13
KTN1-201ENST00000334975 EHMT2Q96KQ7 1210 aa14.24□□□□□ -0.13
KTN1-201ENST00000334975 SLC24A1O60721 1099 aa14.17□□□□□ -0.14
KTN1-201ENST00000334975 MYO15BQ96JP2 1530 aa14.14□□□□□ -0.15
KTN1-201ENST00000334975 DCAF1Q9Y4B6 1507 aa14.11□□□□□ -0.15
KTN1-201ENST00000334975 NCBP3Q53F19 620 aaKnown RBP14.09□□□□□ -0.15
KTN1-201ENST00000334975 MSH5O43196 834 aa14.03□□□□□ -0.16
KTN1-201ENST00000334975 NPM3O75607 178 aaKnown RBP14.02□□□□□ -0.17
KTN1-201ENST00000334975 SLC4A1APQ9BWU0 796 aaKnown RBP14.01□□□□□ -0.17
KTN1-201ENST00000334975 UNC13AQ9UPW8 1703 aa13.96□□□□□ -0.17
KTN1-201ENST00000334975 PABPN1Q86U42 306 aaKnown RBP eCLIP13.95□□□□□ -0.18
KTN1-201ENST00000334975 SCRIBQ14160 1630 aa13.91□□□□□ -0.18
KTN1-201ENST00000334975 CNKSR2Q8WXI2 1034 aa13.88□□□□□ -0.19
KTN1-201ENST00000334975 SCAF1Q9H7N4 1312 aaKnown RBP13.88□□□□□ -0.19
KTN1-201ENST00000334975 BICRAQ9NZM4 1560 aa13.85□□□□□ -0.19
KTN1-201ENST00000334975 CSRNP3Q8WYN3 585 aa13.84□□□□□ -0.19
KTN1-201ENST00000334975 MAPK8IP2Q13387 824 aaPredicted RBP13.83□□□□□ -0.2
KTN1-201ENST00000334975 SHROOM4Q9ULL8 1493 aa13.65□□□□□ -0.22
KTN1-201ENST00000334975 DNAJC5BQ9UF47 199 aa13.64□□□□□ -0.23
KTN1-201ENST00000334975 ZBTB22O15209 634 aa13.59□□□□□ -0.23
KTN1-201ENST00000334975 RNF216Q9NWF9 866 aaPredicted RBP13.5□□□□□ -0.25
KTN1-201ENST00000334975 EIF4G1Q04637 1599 aaKnown RBP13.49□□□□□ -0.25
KTN1-201ENST00000334975 DMRT2Q9Y5R5 561 aa13.44□□□□□ -0.26
KTN1-201ENST00000334975 CC2D2AQ9P2K1 1620 aa13.43□□□□□ -0.26
KTN1-201ENST00000334975 CECR2Q9BXF3 1484 aa13.37□□□□□ -0.27
KTN1-201ENST00000334975 HOXD11P31277 338 aaPredicted RBP13.34□□□□□ -0.27
KTN1-201ENST00000334975 FOXD4L1Q9NU39 408 aa13.31□□□□□ -0.28
KTN1-201ENST00000334975 SMARCA4P51532 1647 aa13.27□□□□□ -0.29
KTN1-201ENST00000334975 BAZ1AQ9NRL2 1556 aaPredicted RBP13.26□□□□□ -0.29
KTN1-201ENST00000334975 MROH2BQ7Z745 1585 aa13.22□□□□□ -0.29
KTN1-201ENST00000334975 ATAD2BQ9ULI0 1458 aa13.19□□□□□ -0.3
KTN1-201ENST00000334975 NCAPD3P42695 1498 aa13.16□□□□□ -0.3
KTN1-201ENST00000334975 SMARCA2P51531 1590 aa13.16□□□□□ -0.3
KTN1-201ENST00000334975 SLC4A2P04920 1241 aa13.15□□□□□ -0.3
KTN1-201ENST00000334975 PEG3Q9GZU2 1588 aa13.1□□□□□ -0.31
KTN1-201ENST00000334975 BAZ1BQ9UIG0 1483 aaKnown RBP13.1□□□□□ -0.31
KTN1-201ENST00000334975 HMGXB3Q12766 1538 aa13.08□□□□□ -0.31
KTN1-201ENST00000334975 WIZO95785 1651 aa13.08□□□□□ -0.32
KTN1-201ENST00000334975 RSF1Q96T23 1441 aaPredicted RBP13.08□□□□□ -0.32
KTN1-201ENST00000334975 RTN4Q9NQC3 1192 aaKnown RBP13.07□□□□□ -0.32
KTN1-201ENST00000334975 TOP2AP11388 1531 aaKnown RBP12.91□□□□□ -0.34
KTN1-201ENST00000334975 NESP48681 1621 aa12.89□□□□□ -0.35
KTN1-201ENST00000334975 SUPT5HO00267 1087 aaKnown RBP12.87□□□□□ -0.35
KTN1-201ENST00000334975 MYCNP04198 464 aaPredicted RBP12.87□□□□□ -0.35
KTN1-201ENST00000334975 DCAF8L1A6NGE4 600 aa12.85□□□□□ -0.35
KTN1-201ENST00000334975 ERCC6Q03468 1493 aa12.82□□□□□ -0.36
KTN1-201ENST00000334975 CADPSQ9ULU8 1353 aa12.81□□□□□ -0.36
KTN1-201ENST00000334975 LAMC3Q9Y6N6 1575 aa12.8□□□□□ -0.36
KTN1-201ENST00000334975 CCDC88BA6NC98 1476 aa12.79□□□□□ -0.36
KTN1-201ENST00000334975 ATXN8OSP0DMR3 200 aa12.74□□□□□ -0.37
KTN1-201ENST00000334975 PDS5BQ9NTI5 1447 aa12.74□□□□□ -0.37
KTN1-201ENST00000334975 CFTRP13569 1480 aa12.73□□□□□ -0.37
KTN1-201ENST00000334975 KIF21AQ7Z4S6 1674 aa12.71□□□□□ -0.37
KTN1-201ENST00000334975 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.7□□□□□ -0.386e-7■□□□□ 9.4
KTN1-201ENST00000334975 FANCD2Q9BXW9 1451 aa12.66□□□□□ -0.38
KTN1-201ENST00000334975 CEP164Q9UPV0 1460 aa12.64□□□□□ -0.39
KTN1-201ENST00000334975 ATF5Q9Y2D1 282 aaPredicted RBP12.63□□□□□ -0.39
KTN1-201ENST00000334975 THOC2Q8NI27 1593 aaKnown RBP12.63□□□□□ -0.39
KTN1-201ENST00000334975 AMER1Q5JTC6 1135 aaPredicted RBP12.63□□□□□ -0.39
KTN1-201ENST00000334975 U3KPZ7 1027 aaPredicted RBP12.61□□□□□ -0.39
KTN1-201ENST00000334975 CUX2O14529 1486 aa12.6□□□□□ -0.39
KTN1-201ENST00000334975 MRC2Q9UBG0 1479 aa12.6□□□□□ -0.39
KTN1-201ENST00000334975 PRDM2Q13029 1718 aa12.6□□□□□ -0.39
KTN1-201ENST00000334975 WDR62O43379 1518 aa12.55□□□□□ -0.4
KTN1-201ENST00000334975 DAXXQ9UER7 740 aaPredicted RBP12.54□□□□□ -0.4
KTN1-201ENST00000334975 URB2Q14146 1524 aaKnown RBP12.53□□□□□ -0.4
KTN1-201ENST00000334975 SAMD1Q6SPF0 538 aaPredicted RBP12.48□□□□□ -0.41
KTN1-201ENST00000334975 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.46□□□□□ -0.41
KTN1-201ENST00000334975 HNRNPUL2Q1KMD3 747 aaKnown RBP12.46□□□□□ -0.41
KTN1-201ENST00000334975 FKBP8Q14318 412 aa12.46□□□□□ -0.42
KTN1-201ENST00000334975 TOPBP1Q92547 1522 aa12.46□□□□□ -0.42
KTN1-201ENST00000334975 PRKCSHP14314 528 aaPredicted RBP12.45□□□□□ -0.42
KTN1-201ENST00000334975 ABCC8Q09428 1581 aa12.43□□□□□ -0.42
KTN1-201ENST00000334975 DNMBPQ6XZF7 1577 aa12.43□□□□□ -0.42
KTN1-201ENST00000334975 CUX1P39880 1505 aa12.39□□□□□ -0.43
KTN1-201ENST00000334975 POLA1P09884 1462 aaPredicted RBP12.36□□□□□ -0.43
KTN1-201ENST00000334975 IFT140Q96RY7 1462 aa12.36□□□□□ -0.43
KTN1-201ENST00000334975 FGD5Q6ZNL6 1462 aa12.34□□□□□ -0.43
KTN1-201ENST00000334975 ZNF608Q9ULD9 1512 aaPredicted RBP12.34□□□□□ -0.43
KTN1-201ENST00000334975 RAD54L2Q9Y4B4 1467 aa12.33□□□□□ -0.43
KTN1-201ENST00000334975 WRNQ14191 1432 aaPredicted RBP eCLIP12.33□□□□□ -0.43
KTN1-201ENST00000334975 SOGA1O94964 1423 aa12.33□□□□□ -0.44
KTN1-201ENST00000334975 TARBP1Q13395 1621 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms