RNA–Protein interactions for RNA: ENST00000443598.6

HNF4A-205, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-205ENST00000443598 NISCHQ9Y2I1 1504 aa52.22■■■■■ 5.95
HNF4A-205ENST00000443598 CCDC180Q9P1Z9 1646 aa46.61■■■■■ 5.05
HNF4A-205ENST00000443598 ABCC9O60706 1549 aa45.78■■■■■ 4.92
HNF4A-205ENST00000443598 RB1CC1Q8TDY2 1594 aa43.99■■■■■ 4.63
HNF4A-205ENST00000443598 NACADO15069 1562 aa43.89■■■■■ 4.62
HNF4A-205ENST00000443598 DCAF8L2P0C7V8 631 aa43.64■■■■■ 4.58
HNF4A-205ENST00000443598 MYO15BQ96JP2 1530 aa43.57■■■■■ 4.57
HNF4A-205ENST00000443598 ZCCHC6Q5VYS8 1495 aaKnown RBP43.43■■■■■ 4.54
HNF4A-205ENST00000443598 DCAF1Q9Y4B6 1507 aa43.26■■■■■ 4.52
HNF4A-205ENST00000443598 UNC13AQ9UPW8 1703 aa42.99■■■■■ 4.47
HNF4A-205ENST00000443598 PABPN1Q86U42 306 aaKnown RBP eCLIP42.7■■■■■ 4.43
HNF4A-205ENST00000443598 BICRAQ9NZM4 1560 aa42.65■■■■■ 4.42
HNF4A-205ENST00000443598 SCRIBQ14160 1630 aa42.4■■■■■ 4.38
HNF4A-205ENST00000443598 DNAJC5BQ9UF47 199 aa42.29■■■■■ 4.36
HNF4A-205ENST00000443598 SHROOM4Q9ULL8 1493 aa42.27■■■■■ 4.36
HNF4A-205ENST00000443598 EIF4G1Q04637 1599 aaKnown RBP41.55■■■■■ 4.24
HNF4A-205ENST00000443598 CC2D2AQ9P2K1 1620 aa41.45■■■■■ 4.23
HNF4A-205ENST00000443598 CECR2Q9BXF3 1484 aa41.21■■■■■ 4.19
HNF4A-205ENST00000443598 SMARCA4P51532 1647 aa40.58■■■■■ 4.09
HNF4A-205ENST00000443598 BAZ1AQ9NRL2 1556 aaPredicted RBP40.5■■■■■ 4.07
HNF4A-205ENST00000443598 NCAPD3P42695 1498 aa40.49■■■■■ 4.07
HNF4A-205ENST00000443598 ATAD2BQ9ULI0 1458 aa40.43■■■■■ 4.06
HNF4A-205ENST00000443598 SMARCA2P51531 1590 aa40.4■■■■■ 4.06
HNF4A-205ENST00000443598 HMGXB3Q12766 1538 aa40.27■■■■■ 4.04
HNF4A-205ENST00000443598 PEG3Q9GZU2 1588 aa40.24■■■■■ 4.03
HNF4A-205ENST00000443598 MROH2BQ7Z745 1585 aa40.19■■■■■ 4.02
HNF4A-205ENST00000443598 BAZ1BQ9UIG0 1483 aaKnown RBP40.08■■■■■ 4.01
HNF4A-205ENST00000443598 WIZO95785 1651 aa39.75■■■■□ 3.95
HNF4A-205ENST00000443598 RSF1Q96T23 1441 aaPredicted RBP39.64■■■■□ 3.94
HNF4A-205ENST00000443598 NESP48681 1621 aa39.52■■■■□ 3.92
HNF4A-205ENST00000443598 ERCC6Q03468 1493 aa39.51■■■■□ 3.92
HNF4A-205ENST00000443598 LAMC3Q9Y6N6 1575 aa39.48■■■■□ 3.91
HNF4A-205ENST00000443598 TOP2AP11388 1531 aaKnown RBP39.34■■■■□ 3.89
HNF4A-205ENST00000443598 CADPSQ9ULU8 1353 aa39.27■■■■□ 3.88
HNF4A-205ENST00000443598 CUX2O14529 1486 aa39.27■■■■□ 3.88
HNF4A-205ENST00000443598 PDS5BQ9NTI5 1447 aa39.2■■■■□ 3.87
HNF4A-205ENST00000443598 KIF21AQ7Z4S6 1674 aa39.1■■■■□ 3.85
HNF4A-205ENST00000443598 THOC2Q8NI27 1593 aaKnown RBP39.05■■■■□ 3.84
HNF4A-205ENST00000443598 CFTRP13569 1480 aa38.98■■■■□ 3.83
HNF4A-205ENST00000443598 CCDC88BA6NC98 1476 aa38.86■■■■□ 3.81
HNF4A-205ENST00000443598 FANCD2Q9BXW9 1451 aa38.8■■■■□ 3.8
HNF4A-205ENST00000443598 MRC2Q9UBG0 1479 aa38.8■■■■□ 3.8
HNF4A-205ENST00000443598 CEP164Q9UPV0 1460 aa38.79■■■■□ 3.8
HNF4A-205ENST00000443598 PRDM2Q13029 1718 aa38.71■■■■□ 3.79
HNF4A-205ENST00000443598 WDR62O43379 1518 aa38.7■■■■□ 3.79
HNF4A-205ENST00000443598 URB2Q14146 1524 aaKnown RBP38.42■■■■□ 3.74
HNF4A-205ENST00000443598 DNAJC5Q9H3Z4 198 aa38.4■■■■□ 3.74
HNF4A-205ENST00000443598 SUPT5HO00267 1087 aaKnown RBP38.32■■■■□ 3.73
HNF4A-205ENST00000443598 ABCC8Q09428 1581 aa38.2■■■■□ 3.71
HNF4A-205ENST00000443598 TOPBP1Q92547 1522 aa38.15■■■■□ 3.7
HNF4A-205ENST00000443598 DNMBPQ6XZF7 1577 aa38.1■■■■□ 3.69
HNF4A-205ENST00000443598 IFT140Q96RY7 1462 aa38.01■■■■□ 3.67
HNF4A-205ENST00000443598 ZNF608Q9ULD9 1512 aaPredicted RBP37.8■■■■□ 3.64
HNF4A-205ENST00000443598 POLA1P09884 1462 aaPredicted RBP37.8■■■■□ 3.64
HNF4A-205ENST00000443598 TARBP1Q13395 1621 aaKnown RBP37.77■■■■□ 3.64
HNF4A-205ENST00000443598 CUX1P39880 1505 aa37.73■■■■□ 3.63
HNF4A-205ENST00000443598 EIF4G3O43432 1585 aaKnown RBP37.67■■■■□ 3.62
HNF4A-205ENST00000443598 FGD5Q6ZNL6 1462 aa37.66■■■■□ 3.62
HNF4A-205ENST00000443598 SOGA1O94964 1423 aa37.64■■■■□ 3.62
HNF4A-205ENST00000443598 RAD54L2Q9Y4B4 1467 aa37.61■■■■□ 3.61
HNF4A-205ENST00000443598 OSCARQ8IYS5 282 aa37.56■■■■□ 3.6
HNF4A-205ENST00000443598 AQRO60306 1485 aaKnown RBP eCLIP37.55■■■■□ 3.62e-7■■■■■ 27.8
HNF4A-205ENST00000443598 WDR97A6NE52 1622 aa37.53■■■■□ 3.6
HNF4A-205ENST00000443598 TDRD9Q8NDG6 1382 aaKnown RBP37.43■■■■□ 3.58
HNF4A-205ENST00000443598 WRNQ14191 1432 aaPredicted RBP eCLIP37.39■■■■□ 3.58
HNF4A-205ENST00000443598 BIVM-ERCC5R4GMW8 1640 aa37.37■■■■□ 3.57
HNF4A-205ENST00000443598 TOP2BQ02880 1626 aa37.37■■■■□ 3.57
HNF4A-205ENST00000443598 ABCA10Q8WWZ4 1543 aa37.32■■■■□ 3.56
HNF4A-205ENST00000443598 SYNJ1O43426 1573 aa37.29■■■■□ 3.56
HNF4A-205ENST00000443598 CHD1O14646 1710 aa37.27■■■■□ 3.56
HNF4A-205ENST00000443598 GRIN2BQ13224 1484 aa37.26■■■■□ 3.55
HNF4A-205ENST00000443598 GAPVD1Q14C86 1478 aa37.21■■■■□ 3.55
HNF4A-205ENST00000443598 SNAPC4Q5SXM2 1469 aa37.21■■■■□ 3.55
HNF4A-205ENST00000443598 MAGI1Q96QZ7 1491 aaPredicted RBP37.21■■■■□ 3.55
HNF4A-205ENST00000443598 ABCA5Q8WWZ7 1642 aa37.18■■■■□ 3.54
HNF4A-205ENST00000443598 PBRM1Q86U86 1689 aa37.16■■■■□ 3.54
HNF4A-205ENST00000443598 FBLN2P98095 1184 aa37.14■■■■□ 3.54
HNF4A-205ENST00000443598 SYNJ2O15056 1496 aa37.05■■■■□ 3.52
HNF4A-205ENST00000443598 CHMP7Q8WUX9 453 aaPredicted RBP37.03■■■■□ 3.52
HNF4A-205ENST00000443598 RIMBP3CA6NJZ7 1639 aa36.97■■■■□ 3.51
HNF4A-205ENST00000443598 RIMBP3BA6NNM3 1639 aa36.97■■■■□ 3.51
HNF4A-205ENST00000443598 RIMBP3Q9UFD9 1639 aa36.97■■■■□ 3.51
HNF4A-205ENST00000443598 ARHGEF11O15085 1522 aa36.94■■■■□ 3.5
HNF4A-205ENST00000443598 TRIM41Q8WV44 630 aa36.91■■■■□ 3.5
HNF4A-205ENST00000443598 ERICH3Q5RHP9 1530 aa36.88■■■■□ 3.49
HNF4A-205ENST00000443598 CLASP1Q7Z460 1538 aa36.87■■■■□ 3.49
HNF4A-205ENST00000443598 ADAMTS12P58397 1594 aa36.84■■■■□ 3.49
HNF4A-205ENST00000443598 FHAD1B1AJZ9 1412 aa36.78■■■■□ 3.48
HNF4A-205ENST00000443598 GRIN2AQ12879 1464 aa36.77■■■■□ 3.48
HNF4A-205ENST00000443598 KIF27Q86VH2 1401 aa36.65■■■■□ 3.46
HNF4A-205ENST00000443598 NUP160Q12769 1436 aa36.64■■■■□ 3.46
HNF4A-205ENST00000443598 ARAP1Q96P48 1450 aa36.61■■■■□ 3.45
HNF4A-205ENST00000443598 CEP170Q5SW79 1584 aa36.58■■■■□ 3.45
HNF4A-205ENST00000443598 CYB5RLQ6IPT4 315 aa36.57■■■■□ 3.44
HNF4A-205ENST00000443598 IGF1RP08069 1367 aa36.53■■■■□ 3.44
HNF4A-205ENST00000443598 CUL7Q14999 1698 aa36.48■■■■□ 3.43
HNF4A-205ENST00000443598 SHROOM2Q13796 1616 aa36.41■■■■□ 3.42
HNF4A-205ENST00000443598 CARMIL1Q5VZK9 1371 aa36.3■■■■□ 3.4
HNF4A-205ENST00000443598 RUSC2Q8N2Y8 1516 aa36.3■■■■□ 3.4
HNF4A-205ENST00000443598 ERCC6L2Q5T890 1561 aa36.27■■■■□ 3.4
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms