RNA–Protein interactions for RNA: ENST00000422006.5

SSB-205, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 5

Gene SSB, Length 2,463 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-205ENST00000422006 CHIC1Q5VXU3 224 aa18.98■□□□□ 0.63
SSB-205ENST00000422006 AEBP2Q6ZN18 517 aaPredicted RBP18.78■□□□□ 0.6
SSB-205ENST00000422006 NISCHQ9Y2I1 1504 aa17.37■□□□□ 0.37
SSB-205ENST00000422006 PHF23Q9BUL5 403 aaPredicted RBP16.89■□□□□ 0.29
SSB-205ENST00000422006 ABCC9O60706 1549 aa16.17■□□□□ 0.18
SSB-205ENST00000422006 CCDC180Q9P1Z9 1646 aa16.13■□□□□ 0.17
SSB-205ENST00000422006 EHMT2Q96KQ7 1210 aa16.02■□□□□ 0.16
SSB-205ENST00000422006 SLC24A1O60721 1099 aa15.78■□□□□ 0.12
SSB-205ENST00000422006 PLPPR3Q6T4P5 718 aa15.75■□□□□ 0.11
SSB-205ENST00000422006 SENP3Q9H4L4 574 aaPredicted RBP15.66■□□□□ 0.1
SSB-205ENST00000422006 PELP1Q8IZL8 1130 aaKnown RBP15.62■□□□□ 0.09
SSB-205ENST00000422006 RB1CC1Q8TDY2 1594 aa15.54■□□□□ 0.08
SSB-205ENST00000422006 DNAJC5BQ9UF47 199 aa15.54■□□□□ 0.08
SSB-205ENST00000422006 NACADO15069 1562 aa15.36■□□□□ 0.05
SSB-205ENST00000422006 MYT1Q01538 1121 aa15.36■□□□□ 0.05
SSB-205ENST00000422006 SHROOM4Q9ULL8 1493 aa15.22■□□□□ 0.03
SSB-205ENST00000422006 KCNA4P22459 653 aa15.21■□□□□ 0.03
SSB-205ENST00000422006 MYO15BQ96JP2 1530 aa15.15■□□□□ 0.02
SSB-205ENST00000422006 CSRNP3Q8WYN3 585 aa15.09■□□□□ 0.01
SSB-205ENST00000422006 DNAJC5Q9H3Z4 198 aa15.09■□□□□ 0.01
SSB-205ENST00000422006 RTN4Q9NQC3 1192 aaKnown RBP14.96□□□□□ -0.01
SSB-205ENST00000422006 ADRA2BP18089 450 aa14.93□□□□□ -0.02
SSB-205ENST00000422006 UNC13AQ9UPW8 1703 aa14.91□□□□□ -0.02
SSB-205ENST00000422006 BICRAQ9NZM4 1560 aa14.9□□□□□ -0.02
SSB-205ENST00000422006 CECR2Q9BXF3 1484 aa14.82□□□□□ -0.04
SSB-205ENST00000422006 PABPN1Q86U42 306 aaKnown RBP eCLIP14.77□□□□□ -0.04
SSB-205ENST00000422006 TTBK1Q5TCY1 1321 aaPredicted RBP14.77□□□□□ -0.04
SSB-205ENST00000422006 CC2D2AQ9P2K1 1620 aa14.75□□□□□ -0.05
SSB-205ENST00000422006 PPP6R1Q9UPN7 881 aa14.69□□□□□ -0.06
SSB-205ENST00000422006 CUX2O14529 1486 aa14.67□□□□□ -0.06
SSB-205ENST00000422006 DCAF1Q9Y4B6 1507 aa14.64□□□□□ -0.07
SSB-205ENST00000422006 EIF4G1Q04637 1599 aaKnown RBP14.62□□□□□ -0.07
SSB-205ENST00000422006 HRCP23327 699 aa14.56□□□□□ -0.08
SSB-205ENST00000422006 FOXD1Q16676 465 aa14.54□□□□□ -0.08
SSB-205ENST00000422006 SLC4A1APQ9BWU0 796 aaKnown RBP14.51□□□□□ -0.09
SSB-205ENST00000422006 AMER1Q5JTC6 1135 aaPredicted RBP14.49□□□□□ -0.09
SSB-205ENST00000422006 PRKCSHP14314 528 aaPredicted RBP14.44□□□□□ -0.1
SSB-205ENST00000422006 DCAF8L2P0C7V8 631 aa14.36□□□□□ -0.11
SSB-205ENST00000422006 SCAF1Q9H7N4 1312 aaKnown RBP14.32□□□□□ -0.12
SSB-205ENST00000422006 ZCCHC6Q5VYS8 1495 aaKnown RBP14.29□□□□□ -0.12
SSB-205ENST00000422006 SCRIBQ14160 1630 aa14.22□□□□□ -0.13
SSB-205ENST00000422006 ERCC6Q03468 1493 aa14.17□□□□□ -0.14
SSB-205ENST00000422006 ZBTB22O15209 634 aa14.16□□□□□ -0.14
SSB-205ENST00000422006 BCL11AQ9H165 835 aa14.14□□□□□ -0.15
SSB-205ENST00000422006 PPARGC1BQ86YN6 1023 aaKnown RBP14.12□□□□□ -0.15
SSB-205ENST00000422006 NCAPD3P42695 1498 aa14.1□□□□□ -0.15
SSB-205ENST00000422006 APLP2Q06481 763 aa14.09□□□□□ -0.15
SSB-205ENST00000422006 ERICH6Q7L0X2 663 aa14.09□□□□□ -0.15
SSB-205ENST00000422006 NCBP3Q53F19 620 aaKnown RBP14.06□□□□□ -0.16
SSB-205ENST00000422006 PPP4R3CPQ6ZMV5 832 aa14.03□□□□□ -0.16
SSB-205ENST00000422006 HMGXB3Q12766 1538 aa14.01□□□□□ -0.17
SSB-205ENST00000422006 FAM9AQ8IZU1 332 aaPredicted RBP13.99□□□□□ -0.17
SSB-205ENST00000422006 PIAS4Q8N2W9 510 aaPredicted RBP13.95□□□□□ -0.18
SSB-205ENST00000422006 THOC2Q8NI27 1593 aaKnown RBP13.95□□□□□ -0.18
SSB-205ENST00000422006 SMARCA2P51531 1590 aa13.94□□□□□ -0.18
SSB-205ENST00000422006 LAMC3Q9Y6N6 1575 aa13.92□□□□□ -0.18
SSB-205ENST00000422006 ATAD2BQ9ULI0 1458 aa13.83□□□□□ -0.2
SSB-205ENST00000422006 PDS5BQ9NTI5 1447 aa13.81□□□□□ -0.2
SSB-205ENST00000422006 TRIM41Q8WV44 630 aa13.81□□□□□ -0.2
SSB-205ENST00000422006 PEG3Q9GZU2 1588 aa13.75□□□□□ -0.21
SSB-205ENST00000422006 CENPBP07199 599 aaPredicted RBP13.74□□□□□ -0.21
SSB-205ENST00000422006 NPM3O75607 178 aaKnown RBP13.73□□□□□ -0.21
SSB-205ENST00000422006 WDR62O43379 1518 aa13.7□□□□□ -0.22
SSB-205ENST00000422006 BAZ1AQ9NRL2 1556 aaPredicted RBP13.7□□□□□ -0.22
SSB-205ENST00000422006 MRC2Q9UBG0 1479 aa13.69□□□□□ -0.22
SSB-205ENST00000422006 SMARCA4P51532 1647 aa13.67□□□□□ -0.22
SSB-205ENST00000422006 ACIN1Q9UKV3 1341 aaKnown RBP13.66□□□□□ -0.22
SSB-205ENST00000422006 BAZ1BQ9UIG0 1483 aaKnown RBP13.66□□□□□ -0.22
SSB-205ENST00000422006 PCGF6Q9BYE7 350 aa13.66□□□□□ -0.22
SSB-205ENST00000422006 NESP48681 1621 aa13.65□□□□□ -0.23
SSB-205ENST00000422006 OSCARQ8IYS5 282 aa13.63□□□□□ -0.23
SSB-205ENST00000422006 KIF21AQ7Z4S6 1674 aa13.61□□□□□ -0.23
SSB-205ENST00000422006 DAXXQ9UER7 740 aaPredicted RBP13.6□□□□□ -0.23
SSB-205ENST00000422006 GTF3C3Q9Y5Q9 886 aa13.55□□□□□ -0.24
SSB-205ENST00000422006 TAOK2Q9UL54 1235 aa13.54□□□□□ -0.24
SSB-205ENST00000422006 NEUROD1Q13562 356 aa13.54□□□□□ -0.24
SSB-205ENST00000422006 CADPSQ9ULU8 1353 aa13.53□□□□□ -0.24
SSB-205ENST00000422006 RIMBP3CA6NJZ7 1639 aa13.49□□□□□ -0.25
SSB-205ENST00000422006 RIMBP3BA6NNM3 1639 aa13.49□□□□□ -0.25
SSB-205ENST00000422006 RIMBP3Q9UFD9 1639 aa13.49□□□□□ -0.25
SSB-205ENST00000422006 FKBP8Q14318 412 aa13.49□□□□□ -0.25
SSB-205ENST00000422006 ANP32EQ9BTT0 268 aa13.47□□□□□ -0.25
SSB-205ENST00000422006 CEP164Q9UPV0 1460 aa13.46□□□□□ -0.26
SSB-205ENST00000422006 PLCB2Q00722 1185 aa13.45□□□□□ -0.26
SSB-205ENST00000422006 TIMELESSQ9UNS1 1208 aa13.45□□□□□ -0.26
SSB-205ENST00000422006 ARHGEF11O15085 1522 aa13.39□□□□□ -0.27
SSB-205ENST00000422006 CNKSR2Q8WXI2 1034 aa13.39□□□□□ -0.27
SSB-205ENST00000422006 ZEB1P37275 1124 aaPredicted RBP13.38□□□□□ -0.27
SSB-205ENST00000422006 BCANQ96GW7 911 aa13.37□□□□□ -0.27
SSB-205ENST00000422006 RSF1Q96T23 1441 aaPredicted RBP13.36□□□□□ -0.27
SSB-205ENST00000422006 TPRNQ4KMQ1 711 aa13.35□□□□□ -0.27
SSB-205ENST00000422006 IFT140Q96RY7 1462 aa13.32□□□□□ -0.28
SSB-205ENST00000422006 FANCD2Q9BXW9 1451 aa13.32□□□□□ -0.28
SSB-205ENST00000422006 HAP1P54257 671 aaPredicted RBP13.31□□□□□ -0.28
SSB-205ENST00000422006 FOXD4L1Q9NU39 408 aa13.31□□□□□ -0.28
SSB-205ENST00000422006 CFTRP13569 1480 aa13.28□□□□□ -0.28
SSB-205ENST00000422006 ABCC8Q09428 1581 aa13.26□□□□□ -0.29
SSB-205ENST00000422006 TULP1O00294 542 aaPredicted RBP13.25□□□□□ -0.29
SSB-205ENST00000422006 EIF5BO60841 1220 aaKnown RBP13.23□□□□□ -0.29
SSB-205ENST00000422006 WDR97A6NE52 1622 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms