RNA–Protein interactions for RNA: ENST00000531218.5

EEF1D-236, Transcript of eukaryotic translation elongation factor 1 delta, humanhuman

TSL 3

Gene EEF1D, Length 787 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EEF1D-236ENST00000531218 NISCHQ9Y2I1 1504 aa33.77■■■■□ 3
EEF1D-236ENST00000531218 CCDC180Q9P1Z9 1646 aa30.11■■■□□ 2.41
EEF1D-236ENST00000531218 ABCC9O60706 1549 aa29.6■■■□□ 2.33
EEF1D-236ENST00000531218 RB1CC1Q8TDY2 1594 aa28.37■■■□□ 2.13
EEF1D-236ENST00000531218 NACADO15069 1562 aa28.32■■■□□ 2.12
EEF1D-236ENST00000531218 MYO15BQ96JP2 1530 aa28.14■■■□□ 2.1
EEF1D-236ENST00000531218 ZCCHC6Q5VYS8 1495 aaKnown RBP28.13■■■□□ 2.09
EEF1D-236ENST00000531218 DCAF8L2P0C7V8 631 aa28.03■■■□□ 2.08
EEF1D-236ENST00000531218 DCAF1Q9Y4B6 1507 aa27.95■■■□□ 2.06
EEF1D-236ENST00000531218 UNC13AQ9UPW8 1703 aa27.83■■■□□ 2.05
EEF1D-236ENST00000531218 BICRAQ9NZM4 1560 aa27.67■■■□□ 2.02
EEF1D-236ENST00000531218 PABPN1Q86U42 306 aaKnown RBP eCLIP27.58■■■□□ 2.012e-7■■■□□ 14.6
EEF1D-236ENST00000531218 DNAJC5BQ9UF47 199 aa27.48■■□□□ 1.99
EEF1D-236ENST00000531218 SCRIBQ14160 1630 aa27.43■■□□□ 1.98
EEF1D-236ENST00000531218 SHROOM4Q9ULL8 1493 aa27.27■■□□□ 1.96
EEF1D-236ENST00000531218 EIF4G1Q04637 1599 aaKnown RBP26.88■■□□□ 1.89
EEF1D-236ENST00000531218 CC2D2AQ9P2K1 1620 aa26.8■■□□□ 1.88
EEF1D-236ENST00000531218 CECR2Q9BXF3 1484 aa26.62■■□□□ 1.85
EEF1D-236ENST00000531218 SMARCA4P51532 1647 aa26.25■■□□□ 1.79
EEF1D-236ENST00000531218 NCAPD3P42695 1498 aa26.16■■□□□ 1.78
EEF1D-236ENST00000531218 ATAD2BQ9ULI0 1458 aa26.15■■□□□ 1.78
EEF1D-236ENST00000531218 BAZ1AQ9NRL2 1556 aaPredicted RBP26.15■■□□□ 1.78
EEF1D-236ENST00000531218 SMARCA2P51531 1590 aa26.06■■□□□ 1.76
EEF1D-236ENST00000531218 MROH2BQ7Z745 1585 aa26.04■■□□□ 1.76
EEF1D-236ENST00000531218 PEG3Q9GZU2 1588 aa26.03■■□□□ 1.76
EEF1D-236ENST00000531218 HMGXB3Q12766 1538 aa26.03■■□□□ 1.76
EEF1D-236ENST00000531218 BAZ1BQ9UIG0 1483 aaKnown RBP25.86■■□□□ 1.73
EEF1D-236ENST00000531218 WIZO95785 1651 aa25.73■■□□□ 1.71
EEF1D-236ENST00000531218 RSF1Q96T23 1441 aaPredicted RBP25.65■■□□□ 1.7
EEF1D-236ENST00000531218 NESP48681 1621 aa25.61■■□□□ 1.69
EEF1D-236ENST00000531218 ERCC6Q03468 1493 aa25.49■■□□□ 1.67
EEF1D-236ENST00000531218 CUX2O14529 1486 aa25.47■■□□□ 1.67
EEF1D-236ENST00000531218 LAMC3Q9Y6N6 1575 aa25.47■■□□□ 1.67
EEF1D-236ENST00000531218 TOP2AP11388 1531 aaKnown RBP25.44■■□□□ 1.66
EEF1D-236ENST00000531218 CADPSQ9ULU8 1353 aa25.34■■□□□ 1.65
EEF1D-236ENST00000531218 THOC2Q8NI27 1593 aaKnown RBP25.31■■□□□ 1.64
EEF1D-236ENST00000531218 KIF21AQ7Z4S6 1674 aa25.29■■□□□ 1.64
EEF1D-236ENST00000531218 PDS5BQ9NTI5 1447 aa25.24■■□□□ 1.63
EEF1D-236ENST00000531218 CFTRP13569 1480 aa25.2■■□□□ 1.62
EEF1D-236ENST00000531218 DNAJC5Q9H3Z4 198 aa25.15■■□□□ 1.62
EEF1D-236ENST00000531218 CCDC88BA6NC98 1476 aa25.13■■□□□ 1.61
EEF1D-236ENST00000531218 FANCD2Q9BXW9 1451 aa25.06■■□□□ 1.6
EEF1D-236ENST00000531218 MRC2Q9UBG0 1479 aa25.06■■□□□ 1.6
EEF1D-236ENST00000531218 WDR62O43379 1518 aa25.04■■□□□ 1.6
EEF1D-236ENST00000531218 CEP164Q9UPV0 1460 aa25.03■■□□□ 1.6
EEF1D-236ENST00000531218 PRDM2Q13029 1718 aa24.98■■□□□ 1.59
EEF1D-236ENST00000531218 URB2Q14146 1524 aaKnown RBP24.89■■□□□ 1.57
EEF1D-236ENST00000531218 SUPT5HO00267 1087 aaKnown RBP24.67■■□□□ 1.54
EEF1D-236ENST00000531218 TOPBP1Q92547 1522 aa24.66■■□□□ 1.54
EEF1D-236ENST00000531218 DNMBPQ6XZF7 1577 aa24.62■■□□□ 1.53
EEF1D-236ENST00000531218 ABCC8Q09428 1581 aa24.56■■□□□ 1.52
EEF1D-236ENST00000531218 IFT140Q96RY7 1462 aa24.51■■□□□ 1.51
EEF1D-236ENST00000531218 ZNF608Q9ULD9 1512 aaPredicted RBP24.49■■□□□ 1.51
EEF1D-236ENST00000531218 TARBP1Q13395 1621 aaKnown RBP24.46■■□□□ 1.51
EEF1D-236ENST00000531218 POLA1P09884 1462 aaPredicted RBP24.45■■□□□ 1.51
EEF1D-236ENST00000531218 CUX1P39880 1505 aa24.45■■□□□ 1.5
EEF1D-236ENST00000531218 EIF4G3O43432 1585 aaKnown RBP24.38■■□□□ 1.49
EEF1D-236ENST00000531218 FGD5Q6ZNL6 1462 aa24.35■■□□□ 1.49
EEF1D-236ENST00000531218 RAD54L2Q9Y4B4 1467 aa24.34■■□□□ 1.49
EEF1D-236ENST00000531218 OSCARQ8IYS5 282 aa24.29■■□□□ 1.48
EEF1D-236ENST00000531218 AQRO60306 1485 aaKnown RBP eCLIP24.27■■□□□ 1.489e-8■■■■■ 45.4
EEF1D-236ENST00000531218 SOGA1O94964 1423 aa24.27■■□□□ 1.48
EEF1D-236ENST00000531218 WDR97A6NE52 1622 aa24.24■■□□□ 1.47
EEF1D-236ENST00000531218 SYNJ1O43426 1573 aa24.18■■□□□ 1.46
EEF1D-236ENST00000531218 TDRD9Q8NDG6 1382 aaKnown RBP24.17■■□□□ 1.46
EEF1D-236ENST00000531218 BIVM-ERCC5R4GMW8 1640 aa24.17■■□□□ 1.46
EEF1D-236ENST00000531218 TOP2BQ02880 1626 aa24.15■■□□□ 1.46
EEF1D-236ENST00000531218 WRNQ14191 1432 aaPredicted RBP eCLIP24.14■■□□□ 1.452e-6■■■□□ 16.6
EEF1D-236ENST00000531218 ABCA10Q8WWZ4 1543 aa24.11■■□□□ 1.45
EEF1D-236ENST00000531218 CHD1O14646 1710 aa24.1■■□□□ 1.45
EEF1D-236ENST00000531218 ABCA5Q8WWZ7 1642 aa24.08■■□□□ 1.45
EEF1D-236ENST00000531218 SNAPC4Q5SXM2 1469 aa24.07■■□□□ 1.44
EEF1D-236ENST00000531218 GRIN2BQ13224 1484 aa24.03■■□□□ 1.44
EEF1D-236ENST00000531218 PBRM1Q86U86 1689 aa24.02■■□□□ 1.44
EEF1D-236ENST00000531218 GAPVD1Q14C86 1478 aa24■■□□□ 1.43
EEF1D-236ENST00000531218 MAGI1Q96QZ7 1491 aaPredicted RBP24■■□□□ 1.43
EEF1D-236ENST00000531218 TRIM41Q8WV44 630 aa24■■□□□ 1.43
EEF1D-236ENST00000531218 SYNJ2O15056 1496 aa23.92■■□□□ 1.42
EEF1D-236ENST00000531218 RIMBP3CA6NJZ7 1639 aa23.92■■□□□ 1.42
EEF1D-236ENST00000531218 RIMBP3BA6NNM3 1639 aa23.92■■□□□ 1.42
EEF1D-236ENST00000531218 RIMBP3Q9UFD9 1639 aa23.92■■□□□ 1.42
EEF1D-236ENST00000531218 ARHGEF11O15085 1522 aa23.89■■□□□ 1.41
EEF1D-236ENST00000531218 CLASP1Q7Z460 1538 aa23.89■■□□□ 1.41
EEF1D-236ENST00000531218 ADAMTS12P58397 1594 aa23.86■■□□□ 1.41
EEF1D-236ENST00000531218 FBLN2P98095 1184 aa23.85■■□□□ 1.41
EEF1D-236ENST00000531218 ERICH3Q5RHP9 1530 aa23.8■■□□□ 1.4
EEF1D-236ENST00000531218 CHMP7Q8WUX9 453 aaPredicted RBP23.79■■□□□ 1.4
EEF1D-236ENST00000531218 GRIN2AQ12879 1464 aa23.75■■□□□ 1.39
EEF1D-236ENST00000531218 FHAD1B1AJZ9 1412 aa23.73■■□□□ 1.39
EEF1D-236ENST00000531218 ARAP1Q96P48 1450 aa23.71■■□□□ 1.39
EEF1D-236ENST00000531218 NUP160Q12769 1436 aa23.7■■□□□ 1.38
EEF1D-236ENST00000531218 CEP170Q5SW79 1584 aa23.69■■□□□ 1.38
EEF1D-236ENST00000531218 CYB5RLQ6IPT4 315 aa23.64■■□□□ 1.37
EEF1D-236ENST00000531218 KIF27Q86VH2 1401 aa23.6■■□□□ 1.37
EEF1D-236ENST00000531218 IGF1RP08069 1367 aa23.59■■□□□ 1.37
EEF1D-236ENST00000531218 SHROOM2Q13796 1616 aa23.57■■□□□ 1.36
EEF1D-236ENST00000531218 ERCC6L2Q5T890 1561 aa23.55■■□□□ 1.36
EEF1D-236ENST00000531218 CUL7Q14999 1698 aa23.54■■□□□ 1.36
EEF1D-236ENST00000531218 RUSC2Q8N2Y8 1516 aa23.52■■□□□ 1.36
EEF1D-236ENST00000531218 CARMIL1Q5VZK9 1371 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms