RNA–Protein interactions for RNA: ENST00000518297.5

LARP1-204, Transcript of La ribonucleoprotein domain family member 1, humanhuman

TSL 5

Gene LARP1, Length 2,630 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP1-204ENST00000518297 NISCHQ9Y2I1 1504 aa43.28■■■■■ 4.52
LARP1-204ENST00000518297 CCDC180Q9P1Z9 1646 aa36.88■■■■□ 3.49
LARP1-204ENST00000518297 SHROOM4Q9ULL8 1493 aa36.87■■■■□ 3.49
LARP1-204ENST00000518297 ZCCHC6Q5VYS8 1495 aaKnown RBP36.48■■■■□ 3.43
LARP1-204ENST00000518297 DCAF8L2P0C7V8 631 aa36.39■■■■□ 3.42
LARP1-204ENST00000518297 SUPT5HO00267 1087 aaKnown RBP35.92■■■■□ 3.34
LARP1-204ENST00000518297 DCAF1Q9Y4B6 1507 aa35.35■■■■□ 3.25
LARP1-204ENST00000518297 ABCC9O60706 1549 aa34.89■■■■□ 3.18
LARP1-204ENST00000518297 SCRIBQ14160 1630 aa34.73■■■■□ 3.15
LARP1-204ENST00000518297 PELP1Q8IZL8 1130 aaKnown RBP34.58■■■■□ 3.13
LARP1-204ENST00000518297 CHIC1Q5VXU3 224 aa34.56■■■■□ 3.12
LARP1-204ENST00000518297 MYO15BQ96JP2 1530 aa34.46■■■■□ 3.11
LARP1-204ENST00000518297 HRCP23327 699 aa34.44■■■■□ 3.1
LARP1-204ENST00000518297 NACADO15069 1562 aa34.26■■■■□ 3.07
LARP1-204ENST00000518297 RSF1Q96T23 1441 aaPredicted RBP34.13■■■■□ 3.05
LARP1-204ENST00000518297 CECR2Q9BXF3 1484 aa33.94■■■■□ 3.02
LARP1-204ENST00000518297 RB1CC1Q8TDY2 1594 aa33.84■■■■□ 3.01
LARP1-204ENST00000518297 PCGF6Q9BYE7 350 aa33.76■■■□□ 2.99
LARP1-204ENST00000518297 MROH2BQ7Z745 1585 aa33.72■■■□□ 2.99
LARP1-204ENST00000518297 LOC105371045A0A1W2PR82 267 aa33.67■■■□□ 2.98
LARP1-204ENST00000518297 PPARGC1BQ86YN6 1023 aaKnown RBP33.62■■■□□ 2.97
LARP1-204ENST00000518297 MYT1Q01538 1121 aa33.52■■■□□ 2.96
LARP1-204ENST00000518297 WIZO95785 1651 aa33.52■■■□□ 2.96
LARP1-204ENST00000518297 UNC13AQ9UPW8 1703 aa33.4■■■□□ 2.94
LARP1-204ENST00000518297 PABPN1Q86U42 306 aaKnown RBP eCLIP33.38■■■□□ 2.93
LARP1-204ENST00000518297 TRIM41Q8WV44 630 aa33.38■■■□□ 2.93
LARP1-204ENST00000518297 FAM9AQ8IZU1 332 aaPredicted RBP33.27■■■□□ 2.92
LARP1-204ENST00000518297 BAZ1AQ9NRL2 1556 aaPredicted RBP33.23■■■□□ 2.91
LARP1-204ENST00000518297 EHMT2Q96KQ7 1210 aa33.14■■■□□ 2.89
LARP1-204ENST00000518297 SMARCA4P51532 1647 aa33.06■■■□□ 2.88
LARP1-204ENST00000518297 SCAF1Q9H7N4 1312 aaKnown RBP33.04■■■□□ 2.88
LARP1-204ENST00000518297 TRIM26Q12899 539 aaPredicted RBP33.03■■■□□ 2.88
LARP1-204ENST00000518297 BICRAQ9NZM4 1560 aa33.01■■■□□ 2.88
LARP1-204ENST00000518297 TOP2AP11388 1531 aaKnown RBP32.86■■■□□ 2.85
LARP1-204ENST00000518297 CCDC88BA6NC98 1476 aa32.82■■■□□ 2.84
LARP1-204ENST00000518297 SMARCA2P51531 1590 aa32.71■■■□□ 2.83
LARP1-204ENST00000518297 EIF4G1Q04637 1599 aaKnown RBP32.71■■■□□ 2.83
LARP1-204ENST00000518297 ABCC8Q09428 1581 aa32.65■■■□□ 2.82
LARP1-204ENST00000518297 ZEB1P37275 1124 aaPredicted RBP32.54■■■□□ 2.8
LARP1-204ENST00000518297 ATAD2BQ9ULI0 1458 aa32.36■■■□□ 2.77
LARP1-204ENST00000518297 PEG3Q9GZU2 1588 aa32.33■■■□□ 2.77
LARP1-204ENST00000518297 BAZ1BQ9UIG0 1483 aaKnown RBP32.25■■■□□ 2.75
LARP1-204ENST00000518297 SOGA1O94964 1423 aa32.25■■■□□ 2.75
LARP1-204ENST00000518297 RUSC2Q8N2Y8 1516 aa32.16■■■□□ 2.74
LARP1-204ENST00000518297 WRNQ14191 1432 aaPredicted RBP eCLIP32.06■■■□□ 2.729e-7■■■□□ 17.2
LARP1-204ENST00000518297 CSRNP3Q8WYN3 585 aa31.99■■■□□ 2.71
LARP1-204ENST00000518297 ACIN1Q9UKV3 1341 aaKnown RBP31.99■■■□□ 2.71
LARP1-204ENST00000518297 SYNJ1O43426 1573 aa31.94■■■□□ 2.7
LARP1-204ENST00000518297 UBTFP17480 764 aaKnown RBP31.91■■■□□ 2.7
LARP1-204ENST00000518297 TTBK1Q5TCY1 1321 aaPredicted RBP31.89■■■□□ 2.7
LARP1-204ENST00000518297 NEUROD1Q13562 356 aa31.83■■■□□ 2.69
LARP1-204ENST00000518297 CEP162Q5TB80 1403 aa31.79■■■□□ 2.68
LARP1-204ENST00000518297 GTF3C3Q9Y5Q9 886 aa31.76■■■□□ 2.67
LARP1-204ENST00000518297 NCAPD3P42695 1498 aa31.75■■■□□ 2.67
LARP1-204ENST00000518297 EEA1Q15075 1411 aa31.75■■■□□ 2.67
LARP1-204ENST00000518297 TNIKQ9UKE5 1360 aa31.72■■■□□ 2.67
LARP1-204ENST00000518297 HMGXB3Q12766 1538 aa31.65■■■□□ 2.66
LARP1-204ENST00000518297 GOLGA3Q08378 1498 aa31.62■■■□□ 2.65
LARP1-204ENST00000518297 RANGAP1P46060 587 aaPredicted RBP31.61■■■□□ 2.65
LARP1-204ENST00000518297 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.58■■■□□ 2.65
LARP1-204ENST00000518297 CCER1Q8TC90 406 aaPredicted RBP31.51■■■□□ 2.64
LARP1-204ENST00000518297 TOP2BQ02880 1626 aa31.5■■■□□ 2.63
LARP1-204ENST00000518297 CENPBP07199 599 aaPredicted RBP31.48■■■□□ 2.63
LARP1-204ENST00000518297 CEP164Q9UPV0 1460 aa31.48■■■□□ 2.63
LARP1-204ENST00000518297 RAPGEF2Q9Y4G8 1499 aa31.45■■■□□ 2.62
LARP1-204ENST00000518297 CFTRP13569 1480 aa31.39■■■□□ 2.62
LARP1-204ENST00000518297 CUX1P39880 1505 aa31.39■■■□□ 2.62
LARP1-204ENST00000518297 KIF21BO75037 1637 aa31.38■■■□□ 2.61
LARP1-204ENST00000518297 BIVM-ERCC5R4GMW8 1640 aa31.36■■■□□ 2.61
LARP1-204ENST00000518297 CLIP1P30622 1438 aa31.31■■■□□ 2.6
LARP1-204ENST00000518297 CC2D2AQ9P2K1 1620 aa31.31■■■□□ 2.6
LARP1-204ENST00000518297 DIEXFQ68CQ4 756 aaKnown RBP31.22■■■□□ 2.59
LARP1-204ENST00000518297 CADPSQ9ULU8 1353 aa31.18■■■□□ 2.58
LARP1-204ENST00000518297 BCL11AQ9H165 835 aa31.18■■■□□ 2.58
LARP1-204ENST00000518297 PRXQ9BXM0 1461 aa31.09■■■□□ 2.57
LARP1-204ENST00000518297 KIF27Q86VH2 1401 aa31.09■■■□□ 2.57
LARP1-204ENST00000518297 VPS8Q8N3P4 1428 aa31.05■■■□□ 2.56
LARP1-204ENST00000518297 APLP2Q06481 763 aa31■■■□□ 2.55
LARP1-204ENST00000518297 PRDM2Q13029 1718 aa30.99■■■□□ 2.55
LARP1-204ENST00000518297 HNRNPUL2Q1KMD3 747 aaKnown RBP30.97■■■□□ 2.55
LARP1-204ENST00000518297 CUX2O14529 1486 aa30.97■■■□□ 2.55
LARP1-204ENST00000518297 NESP48681 1621 aa30.96■■■□□ 2.55
LARP1-204ENST00000518297 DNAJC5BQ9UF47 199 aa30.95■■■□□ 2.55
LARP1-204ENST00000518297 ERICH3Q5RHP9 1530 aa30.94■■■□□ 2.54
LARP1-204ENST00000518297 FGD5Q6ZNL6 1462 aa30.92■■■□□ 2.54
LARP1-204ENST00000518297 FANCD2Q9BXW9 1451 aa30.9■■■□□ 2.54
LARP1-204ENST00000518297 ZNF316A6NFI3 1004 aaPredicted RBP30.87■■■□□ 2.53
LARP1-204ENST00000518297 IGF1RP08069 1367 aa30.86■■■□□ 2.53
LARP1-204ENST00000518297 ARAP1Q96P48 1450 aa30.85■■■□□ 2.53
LARP1-204ENST00000518297 KANK4Q5T7N3 995 aaPredicted RBP30.78■■■□□ 2.52
LARP1-204ENST00000518297 RAD54L2Q9Y4B4 1467 aa30.75■■■□□ 2.51
LARP1-204ENST00000518297 CARMIL1Q5VZK9 1371 aa30.72■■■□□ 2.51
LARP1-204ENST00000518297 ARHGAP35Q9NRY4 1499 aa30.68■■■□□ 2.5
LARP1-204ENST00000518297 ANP32EQ9BTT0 268 aa30.65■■■□□ 2.5
LARP1-204ENST00000518297 TOPBP1Q92547 1522 aa30.63■■■□□ 2.49
LARP1-204ENST00000518297 P3H3Q8IVL6 736 aa30.61■■■□□ 2.49
LARP1-204ENST00000518297 POLA1P09884 1462 aaPredicted RBP30.6■■■□□ 2.49
LARP1-204ENST00000518297 DNMBPQ6XZF7 1577 aa30.59■■■□□ 2.49
LARP1-204ENST00000518297 PRKCSHP14314 528 aaPredicted RBP30.56■■■□□ 2.48
LARP1-204ENST00000518297 YTHDC1Q96MU7 727 aaKnown RBP30.54■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms