Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.016e-7■□□□□ 8.4
XRN2Q9H0D6 ECHDC2-207ENST00000474789 545 ntTSL 314.85□□□□□ -0.036e-7■□□□□ 8.4
XRN2Q9H0D6 CDK3-204ENST00000588812 570 ntTSL 312.65□□□□□ -0.386e-7■□□□□ 8.4
XRN2Q9H0D6 C1GALT1-203ENST00000419721 591 ntTSL 324.32■■□□□ 1.482e-12■□□□□ 8.4
XRN2Q9H0D6 C1GALT1-206ENST00000467716 458 ntTSL 520.92■□□□□ 0.942e-12■□□□□ 8.4
XRN2Q9H0D6 C1GALT1-207ENST00000476068 1186 ntTSL 1 (best)16.17■□□□□ 0.182e-12■□□□□ 8.4
XRN2Q9H0D6 C1GALT1-205ENST00000436587 6235 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.332e-12■□□□□ 8.4
XRN2Q9H0D6 C1GALT1-204ENST00000429911 802 ntTSL 511.45□□□□□ -0.582e-12■□□□□ 8.4
XRN2Q9H0D6 NKD1-203ENST00000566396 748 ntTSL 317.07■□□□□ 0.326e-10■□□□□ 8.4
XRN2Q9H0D6 MTHFR-201ENST00000376486 875 ntTSL 1 (best)23.49■■□□□ 1.351e-6■□□□□ 8.4
XRN2Q9H0D6 MTHFR-217ENST00000641820 1569 ntBASIC16.85■□□□□ 0.291e-6■□□□□ 8.4
XRN2Q9H0D6 CDC7-205ENST00000497611 729 ntTSL 316.69■□□□□ 0.261e-6■□□□□ 8.4
XRN2Q9H0D6 MTHFR-210ENST00000641407 2387 ntBASIC15.31■□□□□ 0.041e-6■□□□□ 8.4
XRN2Q9H0D6 SNHG1-216ENST00000541416 996 ntTSL 215.15■□□□□ 0.021e-6■□□□□ 8.4
XRN2Q9H0D6 MTHFR-216ENST00000641805 2945 nt13.43□□□□□ -0.261e-6■□□□□ 8.4
XRN2Q9H0D6 SNHG1-221ENST00000544983 870 ntTSL 213.37□□□□□ -0.271e-6■□□□□ 8.4
XRN2Q9H0D6 MTHFR-212ENST00000641446 2820 nt12.98□□□□□ -0.331e-6■□□□□ 8.4
XRN2Q9H0D6 MTHFR-213ENST00000641721 891 nt12.83□□□□□ -0.361e-6■□□□□ 8.4
XRN2Q9H0D6 MTHFR-215ENST00000641759 2454 nt12.36□□□□□ -0.431e-6■□□□□ 8.4
XRN2Q9H0D6 MTHFR-214ENST00000641747 3227 nt11.68□□□□□ -0.541e-6■□□□□ 8.4
XRN2Q9H0D6 SNHG1-215ENST00000540904 594 ntTSL 510.78□□□□□ -0.681e-6■□□□□ 8.4
XRN2Q9H0D6 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.131e-6■□□□□ 8.4
XRN2Q9H0D6 CDC7-202ENST00000426137 701 ntTSL 56.74□□□□□ -1.331e-6■□□□□ 8.4
XRN2Q9H0D6 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.351e-6■□□□□ 8.4
XRN2Q9H0D6 SNHG1-207ENST00000537965 578 ntTSL 56.55□□□□□ -1.361e-6■□□□□ 8.4
XRN2Q9H0D6 SNHG1-222ENST00000545308 646 ntTSL 24.3□□□□□ -1.721e-6■□□□□ 8.4
XRN2Q9H0D6 FDFT1-221ENST00000532266 583 ntTSL 59.44□□□□□ -0.97e-12■□□□□ 8.3
XRN2Q9H0D6 TCF25-221ENST00000568409 857 ntTSL 315.76■□□□□ 0.118e-17■□□□□ 8.3
XRN2Q9H0D6 TCF25-219ENST00000566751 383 ntTSL 59.75□□□□□ -0.858e-17■□□□□ 8.3
XRN2Q9H0D6 GRAMD1A-205ENST00000595596 881 ntTSL 223.22■■□□□ 1.312e-7■□□□□ 8.3
XRN2Q9H0D6 FIS1-206ENST00000473527 1005 ntTSL 1 (best)21.7■■□□□ 1.062e-7■□□□□ 8.3
XRN2Q9H0D6 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC21.7■■□□□ 1.062e-7■□□□□ 8.3
XRN2Q9H0D6 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.63■□□□□ 0.892e-7■□□□□ 8.3
XRN2Q9H0D6 FIS1-209ENST00000482199 731 ntTSL 320.63■□□□□ 0.892e-7■□□□□ 8.3
XRN2Q9H0D6 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.262e-7■□□□□ 8.3
XRN2Q9H0D6 GRAMD1A-209ENST00000598580 400 ntTSL 313.51□□□□□ -0.252e-7■□□□□ 8.3
XRN2Q9H0D6 FIS1-205ENST00000463406 527 ntTSL 311.2□□□□□ -0.622e-7■□□□□ 8.3
XRN2Q9H0D6 EP400NL-213ENST00000613241 455 ntTSL 315.73■□□□□ 0.112e-17■□□□□ 8.3
XRN2Q9H0D6 NINL-202ENST00000336104 439 ntTSL 315.67■□□□□ 0.11e-10■□□□□ 8.3
XRN2Q9H0D6 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.52■□□□□ 0.882e-7■□□□□ 8.3
XRN2Q9H0D6 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC19.1■□□□□ 0.652e-7■□□□□ 8.3
XRN2Q9H0D6 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.582e-7■□□□□ 8.3
XRN2Q9H0D6 RAB17-205ENST00000411462 663 ntTSL 217.93■□□□□ 0.462e-7■□□□□ 8.3
XRN2Q9H0D6 RAB17-206ENST00000414278 1511 ntTSL 217.41■□□□□ 0.382e-7■□□□□ 8.3
XRN2Q9H0D6 RAB17-208ENST00000430445 421 ntTSL 517.05■□□□□ 0.322e-7■□□□□ 8.3
XRN2Q9H0D6 RAB17-202ENST00000392001 1792 ntTSL 1 (best)16.9■□□□□ 0.32e-7■□□□□ 8.3
XRN2Q9H0D6 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.782e-9■□□□□ 8.3
XRN2Q9H0D6 ESYT2-202ENST00000275418 3251 ntAPPRIS ALT2 TSL 519.75■□□□□ 0.752e-9■□□□□ 8.3
XRN2Q9H0D6 ESYT2-205ENST00000497111 663 ntTSL 418.04■□□□□ 0.482e-9■□□□□ 8.3
XRN2Q9H0D6 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.282e-9■□□□□ 8.3
XRN2Q9H0D6 RANBP1-213ENST00000486575 2177 ntTSL 221.41■■□□□ 1.022e-8■□□□□ 8.3
XRN2Q9H0D6 RHOT2-225ENST00000570092 674 ntTSL 329.33■■■□□ 2.291e-6■□□□□ 8.2
XRN2Q9H0D6 RHOT2-223ENST00000569706 588 ntTSL 328.82■■■□□ 2.21e-6■□□□□ 8.2
XRN2Q9H0D6 RHOT2-207ENST00000562708 672 ntTSL 528.13■■■□□ 2.091e-6■□□□□ 8.2
XRN2Q9H0D6 RHOT2-214ENST00000566214 683 ntTSL 528.13■■■□□ 2.091e-6■□□□□ 8.2
XRN2Q9H0D6 CAPRIN1-203ENST00000526477 587 ntTSL 227.33■■□□□ 1.971e-6■□□□□ 8.2
XRN2Q9H0D6 KLC1-211ENST00000538504 822 ntTSL 227.02■■□□□ 1.921e-6■□□□□ 8.2
XRN2Q9H0D6 SYMPK-208ENST00000598059 611 ntTSL 425.79■■□□□ 1.721e-6■□□□□ 8.2
XRN2Q9H0D6 KLC1-226ENST00000557686 535 ntTSL 325.42■■□□□ 1.661e-6■□□□□ 8.2
XRN2Q9H0D6 SYMPK-212ENST00000598896 1899 ntTSL 1 (best)25.4■■□□□ 1.661e-6■□□□□ 8.2
XRN2Q9H0D6 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC23.64■■□□□ 1.371e-6■□□□□ 8.2
XRN2Q9H0D6 PSMC5-215ENST00000583283 602 ntTSL 423.41■■□□□ 1.341e-6■□□□□ 8.2
XRN2Q9H0D6 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.85■■□□□ 1.251e-6■□□□□ 8.2
XRN2Q9H0D6 HGFAC-203ENST00000509689 1894 ntTSL 522.16■■□□□ 1.141e-6■□□□□ 8.2
XRN2Q9H0D6 HDAC10-212ENST00000477814 1784 ntTSL 221.92■■□□□ 1.11e-6■□□□□ 8.2
XRN2Q9H0D6 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.091e-6■□□□□ 8.2
XRN2Q9H0D6 SYMPK-205ENST00000594293 623 ntTSL 421.61■■□□□ 1.051e-6■□□□□ 8.2
XRN2Q9H0D6 IL17RE-204ENST00000434065 2541 ntTSL 221.57■■□□□ 1.041e-6■□□□□ 8.2
XRN2Q9H0D6 HGFAC-202ENST00000506132 743 ntTSL 221.39■■□□□ 1.011e-6■□□□□ 8.2
XRN2Q9H0D6 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.61■□□□□ 0.891e-6■□□□□ 8.2
XRN2Q9H0D6 HDAC10-221ENST00000498366 2153 ntTSL 520.4■□□□□ 0.861e-6■□□□□ 8.2
XRN2Q9H0D6 RHOT2-206ENST00000562598 612 ntTSL 320.39■□□□□ 0.851e-6■□□□□ 8.2
XRN2Q9H0D6 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.21■□□□□ 0.831e-6■□□□□ 8.2
XRN2Q9H0D6 HDAC10-204ENST00000429374 1634 ntTSL 1 (best)19.97■□□□□ 0.791e-6■□□□□ 8.2
XRN2Q9H0D6 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.93■□□□□ 0.781e-6■□□□□ 8.2
XRN2Q9H0D6 SYMPK-204ENST00000593959 546 ntTSL 419.79■□□□□ 0.761e-6■□□□□ 8.2
XRN2Q9H0D6 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.64■□□□□ 0.741e-6■□□□□ 8.2
XRN2Q9H0D6 HDAC10-206ENST00000454936 1922 ntTSL 219.51■□□□□ 0.711e-6■□□□□ 8.2
XRN2Q9H0D6 IL17RE-202ENST00000383815 2808 ntTSL 219.28■□□□□ 0.681e-6■□□□□ 8.2
XRN2Q9H0D6 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.2■□□□□ 0.661e-6■□□□□ 8.2
XRN2Q9H0D6 HDAC10-214ENST00000483222 2091 ntTSL 518.64■□□□□ 0.571e-6■□□□□ 8.2
XRN2Q9H0D6 MAPK12-209ENST00000497036 6248 ntTSL 218.54■□□□□ 0.561e-6■□□□□ 8.2
XRN2Q9H0D6 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.5■□□□□ 0.551e-6■□□□□ 8.2
XRN2Q9H0D6 RHOT2-224ENST00000569943 635 ntTSL 318.44■□□□□ 0.541e-6■□□□□ 8.2
XRN2Q9H0D6 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.37■□□□□ 0.531e-6■□□□□ 8.2
XRN2Q9H0D6 TBC1D8-204ENST00000463469 561 ntTSL 418.32■□□□□ 0.521e-6■□□□□ 8.2
XRN2Q9H0D6 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.521e-6■□□□□ 8.2
XRN2Q9H0D6 PSMC5-214ENST00000582420 394 ntTSL 418.23■□□□□ 0.511e-6■□□□□ 8.2
XRN2Q9H0D6 AGAP1-209ENST00000453371 2138 ntTSL 518.15■□□□□ 0.51e-6■□□□□ 8.2
XRN2Q9H0D6 HDAC10-203ENST00000415993 2375 ntTSL 1 (best)17.99■□□□□ 0.471e-6■□□□□ 8.2
XRN2Q9H0D6 AGAP1-210ENST00000466575 541 ntTSL 317.69■□□□□ 0.421e-6■□□□□ 8.2
XRN2Q9H0D6 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.49■□□□□ 0.391e-6■□□□□ 8.2
XRN2Q9H0D6 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.371e-6■□□□□ 8.2
XRN2Q9H0D6 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.25■□□□□ 0.351e-6■□□□□ 8.2
XRN2Q9H0D6 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.17■□□□□ 0.181e-6■□□□□ 8.2
XRN2Q9H0D6 RHOT2-203ENST00000561929 625 ntTSL 216.05■□□□□ 0.161e-6■□□□□ 8.2
XRN2Q9H0D6 SHMT2-228ENST00000557302 457 ntTSL 315.74■□□□□ 0.111e-6■□□□□ 8.2
XRN2Q9H0D6 HDAC10-220ENST00000497952 976 ntTSL 513.13□□□□□ -0.311e-6■□□□□ 8.2
XRN2Q9H0D6 PSMC5-206ENST00000579708 558 ntTSL 412.73□□□□□ -0.371e-6■□□□□ 8.2
XRN2Q9H0D6 TBC1D8-201ENST00000376840 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.381e-6■□□□□ 8.2
Retrieved 100 of 21,068 protein–RNA pairs in 76.4 ms