RNA–Protein interactions for RNA: ENST00000486575.1

RANBP1-213, Transcript of RAN binding protein 1, humanhuman

TSL 2

Gene RANBP1, Length 2,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP1-213ENST00000486575 NISCHQ9Y2I1 1504 aa45.34■■■■■ 4.85
RANBP1-213ENST00000486575 CCDC180Q9P1Z9 1646 aa38.93■■■■□ 3.82
RANBP1-213ENST00000486575 ZCCHC6Q5VYS8 1495 aaKnown RBP38.34■■■■□ 3.73
RANBP1-213ENST00000486575 SHROOM4Q9ULL8 1493 aa37.98■■■■□ 3.67
RANBP1-213ENST00000486575 DCAF1Q9Y4B6 1507 aa37.41■■■■□ 3.58
RANBP1-213ENST00000486575 DCAF8L2P0C7V8 631 aa37.13■■■■□ 3.53
RANBP1-213ENST00000486575 SUPT5HO00267 1087 aaKnown RBP37.1■■■■□ 3.53
RANBP1-213ENST00000486575 MYO15BQ96JP2 1530 aa36.49■■■■□ 3.43
RANBP1-213ENST00000486575 ABCC9O60706 1549 aa36.15■■■■□ 3.38
RANBP1-213ENST00000486575 CHIC1Q5VXU3 224 aa36.12■■■■□ 3.37
RANBP1-213ENST00000486575 SCRIBQ14160 1630 aa36.1■■■■□ 3.37
RANBP1-213ENST00000486575 NACADO15069 1562 aa35.96■■■■□ 3.35
RANBP1-213ENST00000486575 RSF1Q96T23 1441 aaPredicted RBP35.67■■■■□ 3.3
RANBP1-213ENST00000486575 RB1CC1Q8TDY2 1594 aa35.38■■■■□ 3.25
RANBP1-213ENST00000486575 CECR2Q9BXF3 1484 aa35.22■■■■□ 3.23
RANBP1-213ENST00000486575 MROH2BQ7Z745 1585 aa35.14■■■■□ 3.22
RANBP1-213ENST00000486575 WIZO95785 1651 aa34.96■■■■□ 3.19
RANBP1-213ENST00000486575 BAZ1AQ9NRL2 1556 aaPredicted RBP34.89■■■■□ 3.18
RANBP1-213ENST00000486575 UNC13AQ9UPW8 1703 aa34.88■■■■□ 3.17
RANBP1-213ENST00000486575 LOC105371045A0A1W2PR82 267 aa34.85■■■■□ 3.17
RANBP1-213ENST00000486575 TRIM41Q8WV44 630 aa34.72■■■■□ 3.15
RANBP1-213ENST00000486575 SMARCA4P51532 1647 aa34.63■■■■□ 3.13
RANBP1-213ENST00000486575 EIF4G1Q04637 1599 aaKnown RBP34.54■■■■□ 3.12
RANBP1-213ENST00000486575 TOP2AP11388 1531 aaKnown RBP34.53■■■■□ 3.12
RANBP1-213ENST00000486575 PCGF6Q9BYE7 350 aa34.53■■■■□ 3.12
RANBP1-213ENST00000486575 HRCP23327 699 aa34.49■■■■□ 3.11
RANBP1-213ENST00000486575 BICRAQ9NZM4 1560 aa34.4■■■■□ 3.1
RANBP1-213ENST00000486575 SMARCA2P51531 1590 aa34.29■■■■□ 3.08
RANBP1-213ENST00000486575 CCDC88BA6NC98 1476 aa34.23■■■■□ 3.07
RANBP1-213ENST00000486575 FAM9AQ8IZU1 332 aaPredicted RBP34.22■■■■□ 3.07
RANBP1-213ENST00000486575 TRIM26Q12899 539 aaPredicted RBP34.14■■■■□ 3.06
RANBP1-213ENST00000486575 PEG3Q9GZU2 1588 aa34.11■■■■□ 3.05
RANBP1-213ENST00000486575 PABPN1Q86U42 306 aaKnown RBP eCLIP34.07■■■■□ 3.04
RANBP1-213ENST00000486575 ABCC8Q09428 1581 aa33.98■■■■□ 3.03
RANBP1-213ENST00000486575 EHMT2Q96KQ7 1210 aa33.76■■■□□ 2.99
RANBP1-213ENST00000486575 ATAD2BQ9ULI0 1458 aa33.74■■■□□ 2.99
RANBP1-213ENST00000486575 BAZ1BQ9UIG0 1483 aaKnown RBP33.61■■■□□ 2.97
RANBP1-213ENST00000486575 EEA1Q15075 1411 aa33.6■■■□□ 2.97
RANBP1-213ENST00000486575 PPARGC1BQ86YN6 1023 aaKnown RBP33.59■■■□□ 2.97
RANBP1-213ENST00000486575 SOGA1O94964 1423 aa33.56■■■□□ 2.96
RANBP1-213ENST00000486575 WRNQ14191 1432 aaPredicted RBP eCLIP33.52■■■□□ 2.967e-6■□□□□ 9.3
RANBP1-213ENST00000486575 SYNJ1O43426 1573 aa33.4■■■□□ 2.94
RANBP1-213ENST00000486575 RUSC2Q8N2Y8 1516 aa33.4■■■□□ 2.94
RANBP1-213ENST00000486575 TNIKQ9UKE5 1360 aa33.38■■■□□ 2.93
RANBP1-213ENST00000486575 CSRNP3Q8WYN3 585 aa33.36■■■□□ 2.93
RANBP1-213ENST00000486575 ZEB1P37275 1124 aaPredicted RBP33.35■■■□□ 2.93
RANBP1-213ENST00000486575 CEP162Q5TB80 1403 aa33.34■■■□□ 2.93
RANBP1-213ENST00000486575 GOLGA3Q08378 1498 aa33.26■■■□□ 2.92
RANBP1-213ENST00000486575 HMGXB3Q12766 1538 aa33.26■■■□□ 2.91
RANBP1-213ENST00000486575 NCAPD3P42695 1498 aa33.2■■■□□ 2.9
RANBP1-213ENST00000486575 KIF21BO75037 1637 aa33.19■■■□□ 2.9
RANBP1-213ENST00000486575 CEP164Q9UPV0 1460 aa33.12■■■□□ 2.89
RANBP1-213ENST00000486575 TOP2BQ02880 1626 aa33.12■■■□□ 2.89
RANBP1-213ENST00000486575 BIVM-ERCC5R4GMW8 1640 aa33.07■■■□□ 2.88
RANBP1-213ENST00000486575 UBTFP17480 764 aaKnown RBP33.07■■■□□ 2.88
RANBP1-213ENST00000486575 CFTRP13569 1480 aa32.83■■■□□ 2.85
RANBP1-213ENST00000486575 RAPGEF2Q9Y4G8 1499 aa32.82■■■□□ 2.84
RANBP1-213ENST00000486575 CLIP1P30622 1438 aa32.78■■■□□ 2.84
RANBP1-213ENST00000486575 PRDM2Q13029 1718 aa32.77■■■□□ 2.84
RANBP1-213ENST00000486575 CUX1P39880 1505 aa32.77■■■□□ 2.84
RANBP1-213ENST00000486575 ERICH3Q5RHP9 1530 aa32.71■■■□□ 2.83
RANBP1-213ENST00000486575 VPS8Q8N3P4 1428 aa32.67■■■□□ 2.82
RANBP1-213ENST00000486575 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.66■■■□□ 2.82
RANBP1-213ENST00000486575 PRXQ9BXM0 1461 aa32.65■■■□□ 2.82
RANBP1-213ENST00000486575 TTBK1Q5TCY1 1321 aaPredicted RBP32.65■■■□□ 2.82
RANBP1-213ENST00000486575 CCER1Q8TC90 406 aaPredicted RBP32.61■■■□□ 2.81
RANBP1-213ENST00000486575 KIF27Q86VH2 1401 aa32.53■■■□□ 2.8
RANBP1-213ENST00000486575 CC2D2AQ9P2K1 1620 aa32.45■■■□□ 2.79
RANBP1-213ENST00000486575 CADPSQ9ULU8 1353 aa32.45■■■□□ 2.78
RANBP1-213ENST00000486575 ARAP1Q96P48 1450 aa32.35■■■□□ 2.77
RANBP1-213ENST00000486575 APLP2Q06481 763 aa32.32■■■□□ 2.76
RANBP1-213ENST00000486575 RANGAP1P46060 587 aaPredicted RBP32.26■■■□□ 2.75
RANBP1-213ENST00000486575 CUX2O14529 1486 aa32.22■■■□□ 2.75
RANBP1-213ENST00000486575 FGD5Q6ZNL6 1462 aa32.21■■■□□ 2.75
RANBP1-213ENST00000486575 IGF1RP08069 1367 aa32.15■■■□□ 2.74
RANBP1-213ENST00000486575 FANCD2Q9BXW9 1451 aa32.13■■■□□ 2.73
RANBP1-213ENST00000486575 ARHGAP35Q9NRY4 1499 aa32.12■■■□□ 2.73
RANBP1-213ENST00000486575 HNRNPUL2Q1KMD3 747 aaKnown RBP32.09■■■□□ 2.73
RANBP1-213ENST00000486575 DNMBPQ6XZF7 1577 aa32.05■■■□□ 2.72
RANBP1-213ENST00000486575 CARMIL1Q5VZK9 1371 aa32■■■□□ 2.71
RANBP1-213ENST00000486575 KANK4Q5T7N3 995 aaPredicted RBP31.94■■■□□ 2.7
RANBP1-213ENST00000486575 TOPBP1Q92547 1522 aa31.93■■■□□ 2.7
RANBP1-213ENST00000486575 ABCA10Q8WWZ4 1543 aa31.91■■■□□ 2.7
RANBP1-213ENST00000486575 RRBP1Q9P2E9 1410 aaKnown RBP31.9■■■□□ 2.7
RANBP1-213ENST00000486575 NESP48681 1621 aa31.89■■■□□ 2.7
RANBP1-213ENST00000486575 POLA1P09884 1462 aaPredicted RBP31.88■■■□□ 2.69
RANBP1-213ENST00000486575 LAMC3Q9Y6N6 1575 aa31.88■■■□□ 2.69
RANBP1-213ENST00000486575 MAP3K1Q13233 1512 aa31.85■■■□□ 2.69
RANBP1-213ENST00000486575 DIEXFQ68CQ4 756 aaKnown RBP31.83■■■□□ 2.69
RANBP1-213ENST00000486575 RAD54L2Q9Y4B4 1467 aa31.82■■■□□ 2.68
RANBP1-213ENST00000486575 CUL7Q14999 1698 aa31.78■■■□□ 2.68
RANBP1-213ENST00000486575 TIAM1Q13009 1591 aa31.78■■■□□ 2.68
RANBP1-213ENST00000486575 WDR97A6NE52 1622 aa31.76■■■□□ 2.67
RANBP1-213ENST00000486575 ZNF316A6NFI3 1004 aaPredicted RBP31.75■■■□□ 2.67
RANBP1-213ENST00000486575 CLSPNQ9HAW4 1339 aa31.71■■■□□ 2.67
RANBP1-213ENST00000486575 CCNB3Q8WWL7 1395 aa31.7■■■□□ 2.66
RANBP1-213ENST00000486575 URB2Q14146 1524 aaKnown RBP31.7■■■□□ 2.66
RANBP1-213ENST00000486575 FHAD1B1AJZ9 1412 aa31.68■■■□□ 2.66
RANBP1-213ENST00000486575 CTTNBP2Q8WZ74 1663 aa31.66■■■□□ 2.66
RANBP1-213ENST00000486575 CFAP43Q8NDM7 1665 aa31.66■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms