RNA–Protein interactions for RNA: ENST00000334553.10

KLC1-202, Transcript of kinesin light chain 1, humanhuman

TSL 5 BASIC

Gene KLC1, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLC1-202ENST00000334553 NISCHQ9Y2I1 1504 aa37.52■■■■□ 3.6
KLC1-202ENST00000334553 CCDC180Q9P1Z9 1646 aa32.52■■■□□ 2.8
KLC1-202ENST00000334553 ZCCHC6Q5VYS8 1495 aaKnown RBP31.62■■■□□ 2.65
KLC1-202ENST00000334553 DCAF1Q9Y4B6 1507 aa31.04■■■□□ 2.56
KLC1-202ENST00000334553 DCAF8L2P0C7V8 631 aa31.03■■■□□ 2.56
KLC1-202ENST00000334553 SHROOM4Q9ULL8 1493 aa30.9■■■□□ 2.54
KLC1-202ENST00000334553 MYO15BQ96JP2 1530 aa30.48■■■□□ 2.47
KLC1-202ENST00000334553 ABCC9O60706 1549 aa30.24■■■□□ 2.43
KLC1-202ENST00000334553 NACADO15069 1562 aa30.13■■■□□ 2.41
KLC1-202ENST00000334553 SUPT5HO00267 1087 aaKnown RBP29.98■■■□□ 2.39
KLC1-202ENST00000334553 SCRIBQ14160 1630 aa29.93■■■□□ 2.38
KLC1-202ENST00000334553 RB1CC1Q8TDY2 1594 aa29.75■■■□□ 2.35
KLC1-202ENST00000334553 RSF1Q96T23 1441 aaPredicted RBP29.29■■■□□ 2.28
KLC1-202ENST00000334553 UNC13AQ9UPW8 1703 aa29.26■■■□□ 2.27
KLC1-202ENST00000334553 CECR2Q9BXF3 1484 aa29.1■■■□□ 2.25
KLC1-202ENST00000334553 CHIC1Q5VXU3 224 aa29.01■■■□□ 2.24
KLC1-202ENST00000334553 MROH2BQ7Z745 1585 aa29■■■□□ 2.23
KLC1-202ENST00000334553 BAZ1AQ9NRL2 1556 aaPredicted RBP28.93■■■□□ 2.22
KLC1-202ENST00000334553 BICRAQ9NZM4 1560 aa28.87■■■□□ 2.21
KLC1-202ENST00000334553 PABPN1Q86U42 306 aaKnown RBP eCLIP28.86■■■□□ 2.21
KLC1-202ENST00000334553 WIZO95785 1651 aa28.82■■■□□ 2.2
KLC1-202ENST00000334553 SMARCA4P51532 1647 aa28.75■■■□□ 2.19
KLC1-202ENST00000334553 TOP2AP11388 1531 aaKnown RBP28.52■■■□□ 2.16
KLC1-202ENST00000334553 PEG3Q9GZU2 1588 aa28.39■■■□□ 2.14
KLC1-202ENST00000334553 EIF4G1Q04637 1599 aaKnown RBP28.28■■■□□ 2.12
KLC1-202ENST00000334553 SMARCA2P51531 1590 aa28.28■■■□□ 2.12
KLC1-202ENST00000334553 CCDC88BA6NC98 1476 aa28.22■■■□□ 2.11
KLC1-202ENST00000334553 TRIM41Q8WV44 630 aa28.17■■■□□ 2.1
KLC1-202ENST00000334553 HRCP23327 699 aa28.14■■■□□ 2.09
KLC1-202ENST00000334553 ATAD2BQ9ULI0 1458 aa28.12■■■□□ 2.09
KLC1-202ENST00000334553 BAZ1BQ9UIG0 1483 aaKnown RBP27.98■■■□□ 2.07
KLC1-202ENST00000334553 LOC105371045A0A1W2PR82 267 aa27.9■■■□□ 2.06
KLC1-202ENST00000334553 HMGXB3Q12766 1538 aa27.82■■■□□ 2.04
KLC1-202ENST00000334553 ABCC8Q09428 1581 aa27.8■■■□□ 2.04
KLC1-202ENST00000334553 NCAPD3P42695 1498 aa27.8■■■□□ 2.04
KLC1-202ENST00000334553 PCGF6Q9BYE7 350 aa27.77■■■□□ 2.04
KLC1-202ENST00000334553 FAM9AQ8IZU1 332 aaPredicted RBP27.65■■■□□ 2.02
KLC1-202ENST00000334553 PPARGC1BQ86YN6 1023 aaKnown RBP27.56■■■□□ 2
KLC1-202ENST00000334553 WRNQ14191 1432 aaPredicted RBP eCLIP27.55■■■□□ 22e-10■■■■■ 91.9
KLC1-202ENST00000334553 EHMT2Q96KQ7 1210 aa27.49■■□□□ 1.99
KLC1-202ENST00000334553 SYNJ1O43426 1573 aa27.44■■□□□ 1.98
KLC1-202ENST00000334553 EEA1Q15075 1411 aa27.44■■□□□ 1.98
KLC1-202ENST00000334553 CC2D2AQ9P2K1 1620 aa27.4■■□□□ 1.98
KLC1-202ENST00000334553 SOGA1O94964 1423 aa27.37■■□□□ 1.97
KLC1-202ENST00000334553 CFTRP13569 1480 aa27.32■■□□□ 1.96
KLC1-202ENST00000334553 PRDM2Q13029 1718 aa27.31■■□□□ 1.96
KLC1-202ENST00000334553 TOP2BQ02880 1626 aa27.3■■□□□ 1.96
KLC1-202ENST00000334553 BIVM-ERCC5R4GMW8 1640 aa27.29■■□□□ 1.96
KLC1-202ENST00000334553 RUSC2Q8N2Y8 1516 aa27.25■■□□□ 1.95
KLC1-202ENST00000334553 CSRNP3Q8WYN3 585 aa27.21■■□□□ 1.95
KLC1-202ENST00000334553 CADPSQ9ULU8 1353 aa27.1■■□□□ 1.93
KLC1-202ENST00000334553 TNIKQ9UKE5 1360 aa27.09■■□□□ 1.93
KLC1-202ENST00000334553 KIF21BO75037 1637 aa27.09■■□□□ 1.93
KLC1-202ENST00000334553 CUX1P39880 1505 aa27.08■■□□□ 1.93
KLC1-202ENST00000334553 GOLGA3Q08378 1498 aa27.08■■□□□ 1.92
KLC1-202ENST00000334553 TRIM26Q12899 539 aaPredicted RBP27.06■■□□□ 1.92
KLC1-202ENST00000334553 DNAJC5BQ9UF47 199 aa27.04■■□□□ 1.92
KLC1-202ENST00000334553 CEP164Q9UPV0 1460 aa27.02■■□□□ 1.92
KLC1-202ENST00000334553 CEP162Q5TB80 1403 aa26.97■■□□□ 1.91
KLC1-202ENST00000334553 UBTFP17480 764 aaKnown RBP26.88■■□□□ 1.89
KLC1-202ENST00000334553 FANCD2Q9BXW9 1451 aa26.81■■□□□ 1.88
KLC1-202ENST00000334553 ERICH3Q5RHP9 1530 aa26.8■■□□□ 1.88
KLC1-202ENST00000334553 KIF27Q86VH2 1401 aa26.8■■□□□ 1.88
KLC1-202ENST00000334553 RAPGEF2Q9Y4G8 1499 aa26.79■■□□□ 1.88
KLC1-202ENST00000334553 LAMC3Q9Y6N6 1575 aa26.79■■□□□ 1.88
KLC1-202ENST00000334553 PRXQ9BXM0 1461 aa26.77■■□□□ 1.88
KLC1-202ENST00000334553 NESP48681 1621 aa26.71■■□□□ 1.87
KLC1-202ENST00000334553 FGD5Q6ZNL6 1462 aa26.7■■□□□ 1.86
KLC1-202ENST00000334553 DNMBPQ6XZF7 1577 aa26.69■■□□□ 1.86
KLC1-202ENST00000334553 CLIP1P30622 1438 aa26.64■■□□□ 1.86
KLC1-202ENST00000334553 ZEB1P37275 1124 aaPredicted RBP26.62■■□□□ 1.85
KLC1-202ENST00000334553 CUX2O14529 1486 aa26.61■■□□□ 1.85
KLC1-202ENST00000334553 TOPBP1Q92547 1522 aa26.6■■□□□ 1.85
KLC1-202ENST00000334553 PDS5BQ9NTI5 1447 aa26.52■■□□□ 1.84
KLC1-202ENST00000334553 IGF1RP08069 1367 aa26.51■■□□□ 1.83
KLC1-202ENST00000334553 VPS8Q8N3P4 1428 aa26.5■■□□□ 1.83
KLC1-202ENST00000334553 POLA1P09884 1462 aaPredicted RBP26.5■■□□□ 1.83
KLC1-202ENST00000334553 ABCA10Q8WWZ4 1543 aa26.49■■□□□ 1.83
KLC1-202ENST00000334553 RANGAP1P46060 587 aaPredicted RBP26.48■■□□□ 1.83
KLC1-202ENST00000334553 URB2Q14146 1524 aaKnown RBP26.46■■□□□ 1.83
KLC1-202ENST00000334553 KIF21AQ7Z4S6 1674 aa26.44■■□□□ 1.82
KLC1-202ENST00000334553 WDR97A6NE52 1622 aa26.41■■□□□ 1.82
KLC1-202ENST00000334553 RAD54L2Q9Y4B4 1467 aa26.41■■□□□ 1.82
KLC1-202ENST00000334553 CARMIL1Q5VZK9 1371 aa26.38■■□□□ 1.81
KLC1-202ENST00000334553 ARAP1Q96P48 1450 aa26.34■■□□□ 1.81
KLC1-202ENST00000334553 SCAF1Q9H7N4 1312 aaKnown RBP26.34■■□□□ 1.81
KLC1-202ENST00000334553 CUL7Q14999 1698 aa26.31■■□□□ 1.8
KLC1-202ENST00000334553 PELP1Q8IZL8 1130 aaKnown RBP26.31■■□□□ 1.8
KLC1-202ENST00000334553 TTBK1Q5TCY1 1321 aaPredicted RBP26.3■■□□□ 1.8
KLC1-202ENST00000334553 ABCA5Q8WWZ7 1642 aa26.26■■□□□ 1.79
KLC1-202ENST00000334553 ARHGAP35Q9NRY4 1499 aa26.24■■□□□ 1.79
KLC1-202ENST00000334553 APLP2Q06481 763 aa26.2■■□□□ 1.79
KLC1-202ENST00000334553 TARBP1Q13395 1621 aaKnown RBP26.18■■□□□ 1.78
KLC1-202ENST00000334553 MRC2Q9UBG0 1479 aa26.16■■□□□ 1.78
KLC1-202ENST00000334553 GAPVD1Q14C86 1478 aa26.13■■□□□ 1.77
KLC1-202ENST00000334553 CTTNBP2Q8WZ74 1663 aa26.12■■□□□ 1.77
KLC1-202ENST00000334553 TDRD9Q8NDG6 1382 aaKnown RBP26.08■■□□□ 1.77
KLC1-202ENST00000334553 WDR62O43379 1518 aa26.03■■□□□ 1.76
KLC1-202ENST00000334553 EFCAB5A4FU69 1503 aa26.02■■□□□ 1.76
KLC1-202ENST00000334553 PBRM1Q86U86 1689 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms