RNA–Protein interactions for RNA: ENST00000474789.1

ECHDC2-207, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 3

Gene ECHDC2, Length 545 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-207ENST00000474789 NISCHQ9Y2I1 1504 aa30.86■■■□□ 2.53
ECHDC2-207ENST00000474789 CCDC180Q9P1Z9 1646 aa27.69■■■□□ 2.02
ECHDC2-207ENST00000474789 ABCC9O60706 1549 aa27.11■■□□□ 1.93
ECHDC2-207ENST00000474789 AEBP2Q6ZN18 517 aaPredicted RBP27.01■■□□□ 1.91
ECHDC2-207ENST00000474789 CHIC1Q5VXU3 224 aa26.65■■□□□ 1.86
ECHDC2-207ENST00000474789 RB1CC1Q8TDY2 1594 aa26.09■■□□□ 1.77
ECHDC2-207ENST00000474789 NACADO15069 1562 aa25.99■■□□□ 1.75
ECHDC2-207ENST00000474789 MYO15BQ96JP2 1530 aa25.76■■□□□ 1.71
ECHDC2-207ENST00000474789 DCAF8L2P0C7V8 631 aa25.7■■□□□ 1.7
ECHDC2-207ENST00000474789 ZCCHC6Q5VYS8 1495 aaKnown RBP25.7■■□□□ 1.7
ECHDC2-207ENST00000474789 UNC13AQ9UPW8 1703 aa25.6■■□□□ 1.69
ECHDC2-207ENST00000474789 DCAF1Q9Y4B6 1507 aa25.57■■□□□ 1.68
ECHDC2-207ENST00000474789 BICRAQ9NZM4 1560 aa25.26■■□□□ 1.63
ECHDC2-207ENST00000474789 PABPN1Q86U42 306 aaKnown RBP eCLIP25.18■■□□□ 1.62
ECHDC2-207ENST00000474789 SCRIBQ14160 1630 aa25.16■■□□□ 1.62
ECHDC2-207ENST00000474789 SHROOM4Q9ULL8 1493 aa25.06■■□□□ 1.6
ECHDC2-207ENST00000474789 DNAJC5BQ9UF47 199 aa24.91■■□□□ 1.58
ECHDC2-207ENST00000474789 EIF4G1Q04637 1599 aaKnown RBP24.63■■□□□ 1.53
ECHDC2-207ENST00000474789 CC2D2AQ9P2K1 1620 aa24.59■■□□□ 1.53
ECHDC2-207ENST00000474789 CECR2Q9BXF3 1484 aa24.4■■□□□ 1.5
ECHDC2-207ENST00000474789 SMARCA4P51532 1647 aa24.06■■□□□ 1.44
ECHDC2-207ENST00000474789 BAZ1AQ9NRL2 1556 aaPredicted RBP23.99■■□□□ 1.43
ECHDC2-207ENST00000474789 SMARCA2P51531 1590 aa23.93■■□□□ 1.42
ECHDC2-207ENST00000474789 NCAPD3P42695 1498 aa23.9■■□□□ 1.42
ECHDC2-207ENST00000474789 ATAD2BQ9ULI0 1458 aa23.89■■□□□ 1.42
ECHDC2-207ENST00000474789 HMGXB3Q12766 1538 aa23.87■■□□□ 1.41
ECHDC2-207ENST00000474789 PEG3Q9GZU2 1588 aa23.82■■□□□ 1.4
ECHDC2-207ENST00000474789 MROH2BQ7Z745 1585 aa23.76■■□□□ 1.39
ECHDC2-207ENST00000474789 BAZ1BQ9UIG0 1483 aaKnown RBP23.73■■□□□ 1.39
ECHDC2-207ENST00000474789 WIZO95785 1651 aa23.55■■□□□ 1.36
ECHDC2-207ENST00000474789 ERCC6Q03468 1493 aa23.43■■□□□ 1.34
ECHDC2-207ENST00000474789 LAMC3Q9Y6N6 1575 aa23.41■■□□□ 1.34
ECHDC2-207ENST00000474789 PHF23Q9BUL5 403 aaPredicted RBP23.41■■□□□ 1.34
ECHDC2-207ENST00000474789 NESP48681 1621 aa23.39■■□□□ 1.33
ECHDC2-207ENST00000474789 RSF1Q96T23 1441 aaPredicted RBP23.37■■□□□ 1.33
ECHDC2-207ENST00000474789 TOP2AP11388 1531 aaKnown RBP23.3■■□□□ 1.32
ECHDC2-207ENST00000474789 CUX2O14529 1486 aa23.28■■□□□ 1.32
ECHDC2-207ENST00000474789 KIF21AQ7Z4S6 1674 aa23.26■■□□□ 1.31
ECHDC2-207ENST00000474789 THOC2Q8NI27 1593 aaKnown RBP23.22■■□□□ 1.31
ECHDC2-207ENST00000474789 PDS5BQ9NTI5 1447 aa23.17■■□□□ 1.3
ECHDC2-207ENST00000474789 CADPSQ9ULU8 1353 aa23.16■■□□□ 1.3
ECHDC2-207ENST00000474789 PRDM2Q13029 1718 aa23.08■■□□□ 1.29
ECHDC2-207ENST00000474789 CFTRP13569 1480 aa23.03■■□□□ 1.28
ECHDC2-207ENST00000474789 MRC2Q9UBG0 1479 aa22.98■■□□□ 1.27
ECHDC2-207ENST00000474789 CEP164Q9UPV0 1460 aa22.98■■□□□ 1.27
ECHDC2-207ENST00000474789 SENP3Q9H4L4 574 aaPredicted RBP22.98■■□□□ 1.27
ECHDC2-207ENST00000474789 DNAJC5Q9H3Z4 198 aa22.96■■□□□ 1.27
ECHDC2-207ENST00000474789 WDR62O43379 1518 aa22.95■■□□□ 1.26
ECHDC2-207ENST00000474789 FANCD2Q9BXW9 1451 aa22.95■■□□□ 1.26
ECHDC2-207ENST00000474789 CCDC88BA6NC98 1476 aa22.92■■□□□ 1.26
ECHDC2-207ENST00000474789 URB2Q14146 1524 aaKnown RBP22.73■■□□□ 1.23
ECHDC2-207ENST00000474789 DNMBPQ6XZF7 1577 aa22.59■■□□□ 1.21
ECHDC2-207ENST00000474789 ABCC8Q09428 1581 aa22.58■■□□□ 1.2
ECHDC2-207ENST00000474789 TOPBP1Q92547 1522 aa22.57■■□□□ 1.2
ECHDC2-207ENST00000474789 SUPT5HO00267 1087 aaKnown RBP22.53■■□□□ 1.2
ECHDC2-207ENST00000474789 IFT140Q96RY7 1462 aa22.49■■□□□ 1.19
ECHDC2-207ENST00000474789 EIF4G3O43432 1585 aaKnown RBP22.4■■□□□ 1.18
ECHDC2-207ENST00000474789 TARBP1Q13395 1621 aaKnown RBP22.39■■□□□ 1.17
ECHDC2-207ENST00000474789 ZNF608Q9ULD9 1512 aaPredicted RBP22.36■■□□□ 1.17
ECHDC2-207ENST00000474789 POLA1P09884 1462 aaPredicted RBP22.36■■□□□ 1.17
ECHDC2-207ENST00000474789 CUX1P39880 1505 aa22.32■■□□□ 1.16
ECHDC2-207ENST00000474789 FGD5Q6ZNL6 1462 aa22.28■■□□□ 1.16
ECHDC2-207ENST00000474789 WDR97A6NE52 1622 aa22.28■■□□□ 1.16
ECHDC2-207ENST00000474789 RAD54L2Q9Y4B4 1467 aa22.22■■□□□ 1.15
ECHDC2-207ENST00000474789 SOGA1O94964 1423 aa22.2■■□□□ 1.14
ECHDC2-207ENST00000474789 CHD1O14646 1710 aa22.19■■□□□ 1.14
ECHDC2-207ENST00000474789 BIVM-ERCC5R4GMW8 1640 aa22.17■■□□□ 1.14
ECHDC2-207ENST00000474789 AQRO60306 1485 aaKnown RBP eCLIP22.17■■□□□ 1.14
ECHDC2-207ENST00000474789 OSCARQ8IYS5 282 aa22.13■■□□□ 1.13
ECHDC2-207ENST00000474789 PBRM1Q86U86 1689 aa22.13■■□□□ 1.13
ECHDC2-207ENST00000474789 TOP2BQ02880 1626 aa22.13■■□□□ 1.13
ECHDC2-207ENST00000474789 SYNJ1O43426 1573 aa22.09■■□□□ 1.13
ECHDC2-207ENST00000474789 WRNQ14191 1432 aaPredicted RBP eCLIP22.08■■□□□ 1.13
ECHDC2-207ENST00000474789 TDRD9Q8NDG6 1382 aaKnown RBP22.08■■□□□ 1.12
ECHDC2-207ENST00000474789 ABCA10Q8WWZ4 1543 aa22.06■■□□□ 1.12
ECHDC2-207ENST00000474789 ABCA5Q8WWZ7 1642 aa22.06■■□□□ 1.12
ECHDC2-207ENST00000474789 SNAPC4Q5SXM2 1469 aa22.05■■□□□ 1.12
ECHDC2-207ENST00000474789 GRIN2BQ13224 1484 aa22.03■■□□□ 1.12
ECHDC2-207ENST00000474789 MAGI1Q96QZ7 1491 aaPredicted RBP22.03■■□□□ 1.12
ECHDC2-207ENST00000474789 GAPVD1Q14C86 1478 aa21.99■■□□□ 1.11
ECHDC2-207ENST00000474789 RIMBP3CA6NJZ7 1639 aa21.97■■□□□ 1.11
ECHDC2-207ENST00000474789 RIMBP3BA6NNM3 1639 aa21.97■■□□□ 1.11
ECHDC2-207ENST00000474789 RIMBP3Q9UFD9 1639 aa21.97■■□□□ 1.11
ECHDC2-207ENST00000474789 SYNJ2O15056 1496 aa21.93■■□□□ 1.1
ECHDC2-207ENST00000474789 FBLN2P98095 1184 aa21.91■■□□□ 1.1
ECHDC2-207ENST00000474789 ARHGEF11O15085 1522 aa21.9■■□□□ 1.1
ECHDC2-207ENST00000474789 TRIM41Q8WV44 630 aa21.89■■□□□ 1.09
ECHDC2-207ENST00000474789 ADAMTS12P58397 1594 aa21.88■■□□□ 1.09
ECHDC2-207ENST00000474789 CLASP1Q7Z460 1538 aa21.87■■□□□ 1.09
ECHDC2-207ENST00000474789 CHMP7Q8WUX9 453 aaPredicted RBP21.83■■□□□ 1.09
ECHDC2-207ENST00000474789 ERICH3Q5RHP9 1530 aa21.83■■□□□ 1.09
ECHDC2-207ENST00000474789 PLPPR3Q6T4P5 718 aa21.77■■□□□ 1.08
ECHDC2-207ENST00000474789 GRIN2AQ12879 1464 aa21.77■■□□□ 1.07
ECHDC2-207ENST00000474789 FHAD1B1AJZ9 1412 aa21.72■■□□□ 1.07
ECHDC2-207ENST00000474789 ARAP1Q96P48 1450 aa21.7■■□□□ 1.06
ECHDC2-207ENST00000474789 CEP170Q5SW79 1584 aa21.7■■□□□ 1.06
ECHDC2-207ENST00000474789 CUL7Q14999 1698 aa21.66■■□□□ 1.06
ECHDC2-207ENST00000474789 NUP160Q12769 1436 aa21.65■■□□□ 1.06
ECHDC2-207ENST00000474789 KIF27Q86VH2 1401 aa21.63■■□□□ 1.05
ECHDC2-207ENST00000474789 SHROOM2Q13796 1616 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms