RNA–Protein interactions for RNA: ENST00000569284.1

TEN1-CDK3-202, Transcript of TEN1-CDK3 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene TEN1-CDK3, Length 3,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TEN1-CDK3-202ENST00000569284 NISCHQ9Y2I1 1504 aa30.55■■■□□ 2.48
TEN1-CDK3-202ENST00000569284 SHROOM4Q9ULL8 1493 aa27.54■■■□□ 2
TEN1-CDK3-202ENST00000569284 SUPT5HO00267 1087 aaKnown RBP27.12■■□□□ 1.93
TEN1-CDK3-202ENST00000569284 DCAF8L2P0C7V8 631 aa26.98■■□□□ 1.91
TEN1-CDK3-202ENST00000569284 CHIC1Q5VXU3 224 aa25.83■■□□□ 1.73
TEN1-CDK3-202ENST00000569284 HRCP23327 699 aa25.77■■□□□ 1.72
TEN1-CDK3-202ENST00000569284 ZCCHC6Q5VYS8 1495 aaKnown RBP25.74■■□□□ 1.71
TEN1-CDK3-202ENST00000569284 PCGF6Q9BYE7 350 aa25.73■■□□□ 1.71
TEN1-CDK3-202ENST00000569284 MYO15BQ96JP2 1530 aa25.71■■□□□ 1.71
TEN1-CDK3-202ENST00000569284 LOC105371045A0A1W2PR82 267 aa25.61■■□□□ 1.69
TEN1-CDK3-202ENST00000569284 EHMT2Q96KQ7 1210 aa25.58■■□□□ 1.69
TEN1-CDK3-202ENST00000569284 PPARGC1BQ86YN6 1023 aaKnown RBP25.55■■□□□ 1.68
TEN1-CDK3-202ENST00000569284 FAM9AQ8IZU1 332 aaPredicted RBP25.29■■□□□ 1.64
TEN1-CDK3-202ENST00000569284 CCDC180Q9P1Z9 1646 aa25.25■■□□□ 1.63
TEN1-CDK3-202ENST00000569284 TRIM41Q8WV44 630 aa24.86■■□□□ 1.57
TEN1-CDK3-202ENST00000569284 SCRIBQ14160 1630 aa24.71■■□□□ 1.55
TEN1-CDK3-202ENST00000569284 TTBK1Q5TCY1 1321 aaPredicted RBP24.67■■□□□ 1.54
TEN1-CDK3-202ENST00000569284 TRIM26Q12899 539 aaPredicted RBP24.61■■□□□ 1.53
TEN1-CDK3-202ENST00000569284 ABCC9O60706 1549 aa24.6■■□□□ 1.53
TEN1-CDK3-202ENST00000569284 PELP1Q8IZL8 1130 aaKnown RBP24.55■■□□□ 1.52
TEN1-CDK3-202ENST00000569284 RSF1Q96T23 1441 aaPredicted RBP24.51■■□□□ 1.51
TEN1-CDK3-202ENST00000569284 DCAF1Q9Y4B6 1507 aa24.46■■□□□ 1.51
TEN1-CDK3-202ENST00000569284 SCAF1Q9H7N4 1312 aaKnown RBP24.44■■□□□ 1.5
TEN1-CDK3-202ENST00000569284 CECR2Q9BXF3 1484 aa24.31■■□□□ 1.48
TEN1-CDK3-202ENST00000569284 RB1CC1Q8TDY2 1594 aa24.31■■□□□ 1.48
TEN1-CDK3-202ENST00000569284 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.18■■□□□ 1.46
TEN1-CDK3-202ENST00000569284 ZEB1P37275 1124 aaPredicted RBP24.16■■□□□ 1.46
TEN1-CDK3-202ENST00000569284 MROH2BQ7Z745 1585 aa24.04■■□□□ 1.44
TEN1-CDK3-202ENST00000569284 RANGAP1P46060 587 aaPredicted RBP24.01■■□□□ 1.43
TEN1-CDK3-202ENST00000569284 PABPN1Q86U42 306 aaKnown RBP eCLIP24.01■■□□□ 1.43
TEN1-CDK3-202ENST00000569284 CCER1Q8TC90 406 aaPredicted RBP23.99■■□□□ 1.43
TEN1-CDK3-202ENST00000569284 WIZO95785 1651 aa23.89■■□□□ 1.41
TEN1-CDK3-202ENST00000569284 UBTFP17480 764 aaKnown RBP23.86■■□□□ 1.41
TEN1-CDK3-202ENST00000569284 NEUROD1Q13562 356 aa23.84■■□□□ 1.41
TEN1-CDK3-202ENST00000569284 ACIN1Q9UKV3 1341 aaKnown RBP23.8■■□□□ 1.4
TEN1-CDK3-202ENST00000569284 GTF3C3Q9Y5Q9 886 aa23.74■■□□□ 1.39
TEN1-CDK3-202ENST00000569284 ABCC8Q09428 1581 aa23.7■■□□□ 1.38
TEN1-CDK3-202ENST00000569284 NACADO15069 1562 aa23.61■■□□□ 1.37
TEN1-CDK3-202ENST00000569284 CCDC88BA6NC98 1476 aa23.61■■□□□ 1.37
TEN1-CDK3-202ENST00000569284 HNRNPUL2Q1KMD3 747 aaKnown RBP23.59■■□□□ 1.37
TEN1-CDK3-202ENST00000569284 SOGA1O94964 1423 aa23.59■■□□□ 1.37
TEN1-CDK3-202ENST00000569284 CENPBP07199 599 aaPredicted RBP23.53■■□□□ 1.36
TEN1-CDK3-202ENST00000569284 DIEXFQ68CQ4 756 aaKnown RBP23.53■■□□□ 1.36
TEN1-CDK3-202ENST00000569284 YTHDC1Q96MU7 727 aaKnown RBP23.51■■□□□ 1.35
TEN1-CDK3-202ENST00000569284 RUSC2Q8N2Y8 1516 aa23.5■■□□□ 1.35
TEN1-CDK3-202ENST00000569284 MYT1Q01538 1121 aa23.48■■□□□ 1.35
TEN1-CDK3-202ENST00000569284 CSRNP3Q8WYN3 585 aa23.47■■□□□ 1.35
TEN1-CDK3-202ENST00000569284 CEP162Q5TB80 1403 aa23.39■■□□□ 1.34
TEN1-CDK3-202ENST00000569284 BAZ1AQ9NRL2 1556 aaPredicted RBP23.37■■□□□ 1.33
TEN1-CDK3-202ENST00000569284 APLP2Q06481 763 aa23.22■■□□□ 1.31
TEN1-CDK3-202ENST00000569284 TOP2AP11388 1531 aaKnown RBP23.17■■□□□ 1.3
TEN1-CDK3-202ENST00000569284 SMARCA4P51532 1647 aa23.16■■□□□ 1.3
TEN1-CDK3-202ENST00000569284 SMARCA2P51531 1590 aa23.16■■□□□ 1.3
TEN1-CDK3-202ENST00000569284 ITGAEP38570 1179 aa23.14■■□□□ 1.29
TEN1-CDK3-202ENST00000569284 TNIKQ9UKE5 1360 aa23.1■■□□□ 1.29
TEN1-CDK3-202ENST00000569284 WRNQ14191 1432 aaPredicted RBP eCLIP23.09■■□□□ 1.29
TEN1-CDK3-202ENST00000569284 EIF4G1Q04637 1599 aaKnown RBP23.05■■□□□ 1.28
TEN1-CDK3-202ENST00000569284 ZNF316A6NFI3 1004 aaPredicted RBP23.03■■□□□ 1.28
TEN1-CDK3-202ENST00000569284 MIER1Q8N108 512 aa23■■□□□ 1.27
TEN1-CDK3-202ENST00000569284 CLIP1P30622 1438 aa22.96■■□□□ 1.27
TEN1-CDK3-202ENST00000569284 GOLGA3Q08378 1498 aa22.95■■□□□ 1.27
TEN1-CDK3-202ENST00000569284 UNC13AQ9UPW8 1703 aa22.9■■□□□ 1.26
TEN1-CDK3-202ENST00000569284 ATP1B4Q9UN42 357 aaPredicted RBP22.89■■□□□ 1.26
TEN1-CDK3-202ENST00000569284 RAPGEF2Q9Y4G8 1499 aa22.87■■□□□ 1.25
TEN1-CDK3-202ENST00000569284 KANK4Q5T7N3 995 aaPredicted RBP22.83■■□□□ 1.25
TEN1-CDK3-202ENST00000569284 SYNJ1O43426 1573 aa22.83■■□□□ 1.25
TEN1-CDK3-202ENST00000569284 BAZ1BQ9UIG0 1483 aaKnown RBP22.8■■□□□ 1.24
TEN1-CDK3-202ENST00000569284 EEA1Q15075 1411 aa22.77■■□□□ 1.24
TEN1-CDK3-202ENST00000569284 P3H3Q8IVL6 736 aa22.77■■□□□ 1.24
TEN1-CDK3-202ENST00000569284 BICRAQ9NZM4 1560 aa22.76■■□□□ 1.23
TEN1-CDK3-202ENST00000569284 CEP164Q9UPV0 1460 aa22.75■■□□□ 1.23
TEN1-CDK3-202ENST00000569284 ATAD2BQ9ULI0 1458 aa22.74■■□□□ 1.23
TEN1-CDK3-202ENST00000569284 VPS8Q8N3P4 1428 aa22.66■■□□□ 1.22
TEN1-CDK3-202ENST00000569284 HIRIP3Q9BW71 556 aaPredicted RBP22.56■■□□□ 1.2
TEN1-CDK3-202ENST00000569284 FAM50AQ14320 339 aaKnown RBP22.54■■□□□ 1.2
TEN1-CDK3-202ENST00000569284 SUPT16HQ9Y5B9 1047 aaKnown RBP22.51■■□□□ 1.19
TEN1-CDK3-202ENST00000569284 KIF21BO75037 1637 aa22.51■■□□□ 1.19
TEN1-CDK3-202ENST00000569284 KCNH8Q96L42 1107 aa22.47■■□□□ 1.19
TEN1-CDK3-202ENST00000569284 DHX57Q6P158 1386 aaKnown RBP22.41■■□□□ 1.18
TEN1-CDK3-202ENST00000569284 SIN3AQ96ST3 1273 aa22.41■■□□□ 1.18
TEN1-CDK3-202ENST00000569284 ARAP1Q96P48 1450 aa22.4■■□□□ 1.18
TEN1-CDK3-202ENST00000569284 BCANQ96GW7 911 aa22.39■■□□□ 1.17
TEN1-CDK3-202ENST00000569284 TSHZ2Q9NRE2 1034 aa22.39■■□□□ 1.17
TEN1-CDK3-202ENST00000569284 ANP32EQ9BTT0 268 aa22.36■■□□□ 1.17
TEN1-CDK3-202ENST00000569284 BCL11AQ9H165 835 aa22.33■■□□□ 1.16
TEN1-CDK3-202ENST00000569284 KIF27Q86VH2 1401 aa22.31■■□□□ 1.16
TEN1-CDK3-202ENST00000569284 ARID3CA6NKF2 412 aa22.31■■□□□ 1.16
TEN1-CDK3-202ENST00000569284 DDX10Q13206 875 aaKnown RBP22.31■■□□□ 1.16
TEN1-CDK3-202ENST00000569284 PEG3Q9GZU2 1588 aa22.28■■□□□ 1.16
TEN1-CDK3-202ENST00000569284 CUX1P39880 1505 aa22.27■■□□□ 1.16
TEN1-CDK3-202ENST00000569284 CUX2O14529 1486 aa22.27■■□□□ 1.16
TEN1-CDK3-202ENST00000569284 CCNB3Q8WWL7 1395 aa22.25■■□□□ 1.15
TEN1-CDK3-202ENST00000569284 TOP2BQ02880 1626 aa22.24■■□□□ 1.15
TEN1-CDK3-202ENST00000569284 PRXQ9BXM0 1461 aa22.24■■□□□ 1.15
TEN1-CDK3-202ENST00000569284 RAB3GAP2Q9H2M9 1393 aa22.19■■□□□ 1.14
TEN1-CDK3-202ENST00000569284 ARHGAP35Q9NRY4 1499 aa22.17■■□□□ 1.14
TEN1-CDK3-202ENST00000569284 CLSPNQ9HAW4 1339 aa22.14■■□□□ 1.13
TEN1-CDK3-202ENST00000569284 IGF1RP08069 1367 aa22.14■■□□□ 1.13
TEN1-CDK3-202ENST00000569284 CARMIL1Q5VZK9 1371 aa22.14■■□□□ 1.13
TEN1-CDK3-202ENST00000569284 TRIM52Q96A61 297 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms