RNA–Protein interactions for RNA: ENST00000554280.5

KLC1-217, Transcript of kinesin light chain 1, humanhuman

TSL 5 BASIC

Gene KLC1, Length 2,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLC1-217ENST00000554280 NISCHQ9Y2I1 1504 aa41.51■■■■■ 4.23
KLC1-217ENST00000554280 CCDC180Q9P1Z9 1646 aa36.12■■■■□ 3.37
KLC1-217ENST00000554280 ZCCHC6Q5VYS8 1495 aaKnown RBP34.89■■■■□ 3.18
KLC1-217ENST00000554280 DCAF8L2P0C7V8 631 aa34.42■■■■□ 3.1
KLC1-217ENST00000554280 DCAF1Q9Y4B6 1507 aa34.3■■■■□ 3.08
KLC1-217ENST00000554280 SHROOM4Q9ULL8 1493 aa34.1■■■■□ 3.05
KLC1-217ENST00000554280 ABCC9O60706 1549 aa34.03■■■■□ 3.04
KLC1-217ENST00000554280 MYO15BQ96JP2 1530 aa33.81■■■■□ 3
KLC1-217ENST00000554280 NACADO15069 1562 aa33.62■■■□□ 2.97
KLC1-217ENST00000554280 RB1CC1Q8TDY2 1594 aa33.31■■■□□ 2.92
KLC1-217ENST00000554280 SCRIBQ14160 1630 aa33.28■■■□□ 2.92
KLC1-217ENST00000554280 SUPT5HO00267 1087 aaKnown RBP32.95■■■□□ 2.87
KLC1-217ENST00000554280 UNC13AQ9UPW8 1703 aa32.56■■■□□ 2.8
KLC1-217ENST00000554280 RSF1Q96T23 1441 aaPredicted RBP32.27■■■□□ 2.76
KLC1-217ENST00000554280 CECR2Q9BXF3 1484 aa32.21■■■□□ 2.75
KLC1-217ENST00000554280 BICRAQ9NZM4 1560 aa32.18■■■□□ 2.74
KLC1-217ENST00000554280 PABPN1Q86U42 306 aaKnown RBP eCLIP32.14■■■□□ 2.74
KLC1-217ENST00000554280 BAZ1AQ9NRL2 1556 aaPredicted RBP32.08■■■□□ 2.73
KLC1-217ENST00000554280 MROH2BQ7Z745 1585 aa32.06■■■□□ 2.72
KLC1-217ENST00000554280 SMARCA4P51532 1647 aa31.88■■■□□ 2.69
KLC1-217ENST00000554280 WIZO95785 1651 aa31.83■■■□□ 2.69
KLC1-217ENST00000554280 CHIC1Q5VXU3 224 aa31.55■■■□□ 2.64
KLC1-217ENST00000554280 TOP2AP11388 1531 aaKnown RBP31.52■■■□□ 2.64
KLC1-217ENST00000554280 PEG3Q9GZU2 1588 aa31.43■■■□□ 2.62
KLC1-217ENST00000554280 SMARCA2P51531 1590 aa31.34■■■□□ 2.61
KLC1-217ENST00000554280 ATAD2BQ9ULI0 1458 aa31.3■■■□□ 2.6
KLC1-217ENST00000554280 EIF4G1Q04637 1599 aaKnown RBP31.27■■■□□ 2.6
KLC1-217ENST00000554280 BAZ1BQ9UIG0 1483 aaKnown RBP31.2■■■□□ 2.59
KLC1-217ENST00000554280 CCDC88BA6NC98 1476 aa31.19■■■□□ 2.58
KLC1-217ENST00000554280 NCAPD3P42695 1498 aa30.99■■■□□ 2.55
KLC1-217ENST00000554280 TRIM41Q8WV44 630 aa30.98■■■□□ 2.55
KLC1-217ENST00000554280 HMGXB3Q12766 1538 aa30.98■■■□□ 2.55
KLC1-217ENST00000554280 CC2D2AQ9P2K1 1620 aa30.77■■■□□ 2.52
KLC1-217ENST00000554280 ABCC8Q09428 1581 aa30.61■■■□□ 2.49
KLC1-217ENST00000554280 WRNQ14191 1432 aaPredicted RBP eCLIP30.44■■■□□ 2.462e-10■■■■■ 91.9
KLC1-217ENST00000554280 FAM9AQ8IZU1 332 aaPredicted RBP30.42■■■□□ 2.46
KLC1-217ENST00000554280 LOC105371045A0A1W2PR82 267 aa30.36■■■□□ 2.45
KLC1-217ENST00000554280 CFTRP13569 1480 aa30.36■■■□□ 2.45
KLC1-217ENST00000554280 PRDM2Q13029 1718 aa30.25■■■□□ 2.43
KLC1-217ENST00000554280 CADPSQ9ULU8 1353 aa30.25■■■□□ 2.43
KLC1-217ENST00000554280 SYNJ1O43426 1573 aa30.23■■■□□ 2.43
KLC1-217ENST00000554280 EEA1Q15075 1411 aa30.13■■■□□ 2.41
KLC1-217ENST00000554280 TOP2BQ02880 1626 aa30.12■■■□□ 2.41
KLC1-217ENST00000554280 BIVM-ERCC5R4GMW8 1640 aa30.07■■■□□ 2.4
KLC1-217ENST00000554280 SOGA1O94964 1423 aa30.07■■■□□ 2.4
KLC1-217ENST00000554280 EHMT2Q96KQ7 1210 aa30.01■■■□□ 2.39
KLC1-217ENST00000554280 CUX1P39880 1505 aa29.97■■■□□ 2.39
KLC1-217ENST00000554280 CSRNP3Q8WYN3 585 aa29.95■■■□□ 2.38
KLC1-217ENST00000554280 LAMC3Q9Y6N6 1575 aa29.95■■■□□ 2.38
KLC1-217ENST00000554280 FANCD2Q9BXW9 1451 aa29.93■■■□□ 2.38
KLC1-217ENST00000554280 RUSC2Q8N2Y8 1516 aa29.91■■■□□ 2.38
KLC1-217ENST00000554280 NESP48681 1621 aa29.88■■■□□ 2.37
KLC1-217ENST00000554280 DNAJC5BQ9UF47 199 aa29.83■■■□□ 2.37
KLC1-217ENST00000554280 PDS5BQ9NTI5 1447 aa29.76■■■□□ 2.35
KLC1-217ENST00000554280 CEP164Q9UPV0 1460 aa29.75■■■□□ 2.35
KLC1-217ENST00000554280 GOLGA3Q08378 1498 aa29.72■■■□□ 2.35
KLC1-217ENST00000554280 DNMBPQ6XZF7 1577 aa29.69■■■□□ 2.34
KLC1-217ENST00000554280 KIF27Q86VH2 1401 aa29.68■■■□□ 2.34
KLC1-217ENST00000554280 UBTFP17480 764 aaKnown RBP29.67■■■□□ 2.34
KLC1-217ENST00000554280 KIF21BO75037 1637 aa29.67■■■□□ 2.34
KLC1-217ENST00000554280 FGD5Q6ZNL6 1462 aa29.65■■■□□ 2.34
KLC1-217ENST00000554280 TNIKQ9UKE5 1360 aa29.63■■■□□ 2.33
KLC1-217ENST00000554280 TOPBP1Q92547 1522 aa29.6■■■□□ 2.33
KLC1-217ENST00000554280 KIF21AQ7Z4S6 1674 aa29.55■■■□□ 2.32
KLC1-217ENST00000554280 CUX2O14529 1486 aa29.54■■■□□ 2.32
KLC1-217ENST00000554280 CEP162Q5TB80 1403 aa29.5■■■□□ 2.31
KLC1-217ENST00000554280 URB2Q14146 1524 aaKnown RBP29.49■■■□□ 2.31
KLC1-217ENST00000554280 POLA1P09884 1462 aaPredicted RBP29.46■■■□□ 2.31
KLC1-217ENST00000554280 RAPGEF2Q9Y4G8 1499 aa29.46■■■□□ 2.31
KLC1-217ENST00000554280 ERICH3Q5RHP9 1530 aa29.45■■■□□ 2.3
KLC1-217ENST00000554280 PRXQ9BXM0 1461 aa29.43■■■□□ 2.3
KLC1-217ENST00000554280 RAD54L2Q9Y4B4 1467 aa29.38■■■□□ 2.29
KLC1-217ENST00000554280 ABCA10Q8WWZ4 1543 aa29.38■■■□□ 2.29
KLC1-217ENST00000554280 MRC2Q9UBG0 1479 aa29.33■■■□□ 2.29
KLC1-217ENST00000554280 IGF1RP08069 1367 aa29.32■■■□□ 2.28
KLC1-217ENST00000554280 PCGF6Q9BYE7 350 aa29.26■■■□□ 2.27
KLC1-217ENST00000554280 CLIP1P30622 1438 aa29.25■■■□□ 2.27
KLC1-217ENST00000554280 ERCC6Q03468 1493 aa29.24■■■□□ 2.27
KLC1-217ENST00000554280 CARMIL1Q5VZK9 1371 aa29.23■■■□□ 2.27
KLC1-217ENST00000554280 WDR97A6NE52 1622 aa29.22■■■□□ 2.27
KLC1-217ENST00000554280 TRIM26Q12899 539 aaPredicted RBP29.22■■■□□ 2.27
KLC1-217ENST00000554280 RANGAP1P46060 587 aaPredicted RBP29.14■■■□□ 2.26
KLC1-217ENST00000554280 CUL7Q14999 1698 aa29.13■■■□□ 2.25
KLC1-217ENST00000554280 WDR62O43379 1518 aa29.12■■■□□ 2.25
KLC1-217ENST00000554280 TDRD9Q8NDG6 1382 aaKnown RBP29.11■■■□□ 2.25
KLC1-217ENST00000554280 TARBP1Q13395 1621 aaKnown RBP29.1■■■□□ 2.25
KLC1-217ENST00000554280 ABCA5Q8WWZ7 1642 aa29.1■■■□□ 2.25
KLC1-217ENST00000554280 GAPVD1Q14C86 1478 aa29.1■■■□□ 2.25
KLC1-217ENST00000554280 IFT140Q96RY7 1462 aa29.01■■■□□ 2.23
KLC1-217ENST00000554280 VPS8Q8N3P4 1428 aa29■■■□□ 2.23
KLC1-217ENST00000554280 PPARGC1BQ86YN6 1023 aaKnown RBP28.98■■■□□ 2.23
KLC1-217ENST00000554280 THOC2Q8NI27 1593 aaKnown RBP28.97■■■□□ 2.23
KLC1-217ENST00000554280 APLP2Q06481 763 aa28.92■■■□□ 2.22
KLC1-217ENST00000554280 PBRM1Q86U86 1689 aa28.91■■■□□ 2.22
KLC1-217ENST00000554280 AQRO60306 1485 aaKnown RBP eCLIP28.87■■■□□ 2.214e-6■■■■□ 23.4
KLC1-217ENST00000554280 ARAP1Q96P48 1450 aa28.86■■■□□ 2.21
KLC1-217ENST00000554280 GRIN2BQ13224 1484 aa28.85■■■□□ 2.21
KLC1-217ENST00000554280 ARHGAP35Q9NRY4 1499 aa28.83■■■□□ 2.21
KLC1-217ENST00000554280 CTTNBP2Q8WZ74 1663 aa28.83■■■□□ 2.21
KLC1-217ENST00000554280 FHAD1B1AJZ9 1412 aa28.79■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms