RNA–Protein interactions for RNA: ENST00000419721.5

C1GALT1-203, Transcript of core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, humanhuman

TSL 3

Gene C1GALT1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1GALT1-203ENST00000419721 NISCHQ9Y2I1 1504 aa50.78■■■■■ 5.72
C1GALT1-203ENST00000419721 CCDC180Q9P1Z9 1646 aa45.19■■■■■ 4.83
C1GALT1-203ENST00000419721 ABCC9O60706 1549 aa44.05■■■■■ 4.64
C1GALT1-203ENST00000419721 RB1CC1Q8TDY2 1594 aa42.45■■■■■ 4.39
C1GALT1-203ENST00000419721 NACADO15069 1562 aa42.43■■■■■ 4.38
C1GALT1-203ENST00000419721 ZCCHC6Q5VYS8 1495 aaKnown RBP42.34■■■■■ 4.37
C1GALT1-203ENST00000419721 DCAF8L2P0C7V8 631 aa42.24■■■■■ 4.35
C1GALT1-203ENST00000419721 MYO15BQ96JP2 1530 aa42.23■■■■■ 4.35
C1GALT1-203ENST00000419721 DCAF1Q9Y4B6 1507 aa42.06■■■■■ 4.32
C1GALT1-203ENST00000419721 UNC13AQ9UPW8 1703 aa41.55■■■■■ 4.24
C1GALT1-203ENST00000419721 BICRAQ9NZM4 1560 aa41.19■■■■■ 4.18
C1GALT1-203ENST00000419721 SCRIBQ14160 1630 aa41.18■■■■■ 4.18
C1GALT1-203ENST00000419721 PABPN1Q86U42 306 aaKnown RBP eCLIP41.11■■■■■ 4.17
C1GALT1-203ENST00000419721 SHROOM4Q9ULL8 1493 aa40.78■■■■■ 4.12
C1GALT1-203ENST00000419721 DNAJC5BQ9UF47 199 aa40.34■■■■■ 4.05
C1GALT1-203ENST00000419721 EIF4G1Q04637 1599 aaKnown RBP40.08■■■■■ 4.01
C1GALT1-203ENST00000419721 CC2D2AQ9P2K1 1620 aa39.89■■■■□ 3.98
C1GALT1-203ENST00000419721 CECR2Q9BXF3 1484 aa39.58■■■■□ 3.93
C1GALT1-203ENST00000419721 SMARCA4P51532 1647 aa39.42■■■■□ 3.9
C1GALT1-203ENST00000419721 BAZ1AQ9NRL2 1556 aaPredicted RBP39.37■■■■□ 3.89
C1GALT1-203ENST00000419721 ATAD2BQ9ULI0 1458 aa39.15■■■■□ 3.86
C1GALT1-203ENST00000419721 SMARCA2P51531 1590 aa39.13■■■■□ 3.85
C1GALT1-203ENST00000419721 NCAPD3P42695 1498 aa39.13■■■■□ 3.85
C1GALT1-203ENST00000419721 MROH2BQ7Z745 1585 aa39.12■■■■□ 3.85
C1GALT1-203ENST00000419721 PEG3Q9GZU2 1588 aa39.06■■■■□ 3.84
C1GALT1-203ENST00000419721 HMGXB3Q12766 1538 aa38.99■■■■□ 3.83
C1GALT1-203ENST00000419721 BAZ1BQ9UIG0 1483 aaKnown RBP38.83■■■■□ 3.81
C1GALT1-203ENST00000419721 WIZO95785 1651 aa38.72■■■■□ 3.79
C1GALT1-203ENST00000419721 RSF1Q96T23 1441 aaPredicted RBP38.69■■■■□ 3.78
C1GALT1-203ENST00000419721 TOP2AP11388 1531 aaKnown RBP38.33■■■■□ 3.73
C1GALT1-203ENST00000419721 NESP48681 1621 aa38.15■■■■□ 3.7
C1GALT1-203ENST00000419721 LAMC3Q9Y6N6 1575 aa38.12■■■■□ 3.69
C1GALT1-203ENST00000419721 CADPSQ9ULU8 1353 aa37.96■■■■□ 3.67
C1GALT1-203ENST00000419721 ERCC6Q03468 1493 aa37.96■■■■□ 3.67
C1GALT1-203ENST00000419721 CCDC88BA6NC98 1476 aa37.84■■■■□ 3.65
C1GALT1-203ENST00000419721 PDS5BQ9NTI5 1447 aa37.8■■■■□ 3.64
C1GALT1-203ENST00000419721 CFTRP13569 1480 aa37.78■■■■□ 3.64
C1GALT1-203ENST00000419721 KIF21AQ7Z4S6 1674 aa37.76■■■■□ 3.64
C1GALT1-203ENST00000419721 SUPT5HO00267 1087 aaKnown RBP37.65■■■■□ 3.62
C1GALT1-203ENST00000419721 THOC2Q8NI27 1593 aaKnown RBP37.63■■■■□ 3.62
C1GALT1-203ENST00000419721 PRDM2Q13029 1718 aa37.58■■■■□ 3.61
C1GALT1-203ENST00000419721 CUX2O14529 1486 aa37.58■■■■□ 3.61
C1GALT1-203ENST00000419721 FANCD2Q9BXW9 1451 aa37.54■■■■□ 3.6
C1GALT1-203ENST00000419721 CEP164Q9UPV0 1460 aa37.5■■■■□ 3.59
C1GALT1-203ENST00000419721 MRC2Q9UBG0 1479 aa37.44■■■■□ 3.58
C1GALT1-203ENST00000419721 WDR62O43379 1518 aa37.35■■■■□ 3.57
C1GALT1-203ENST00000419721 URB2Q14146 1524 aaKnown RBP37.18■■■■□ 3.54
C1GALT1-203ENST00000419721 ABCC8Q09428 1581 aa36.96■■■■□ 3.51
C1GALT1-203ENST00000419721 TOPBP1Q92547 1522 aa36.96■■■■□ 3.51
C1GALT1-203ENST00000419721 DNMBPQ6XZF7 1577 aa36.95■■■■□ 3.51
C1GALT1-203ENST00000419721 CUX1P39880 1505 aa36.71■■■■□ 3.47
C1GALT1-203ENST00000419721 IFT140Q96RY7 1462 aa36.71■■■■□ 3.47
C1GALT1-203ENST00000419721 POLA1P09884 1462 aaPredicted RBP36.65■■■■□ 3.46
C1GALT1-203ENST00000419721 TARBP1Q13395 1621 aaKnown RBP36.59■■■■□ 3.45
C1GALT1-203ENST00000419721 FGD5Q6ZNL6 1462 aa36.57■■■■□ 3.45
C1GALT1-203ENST00000419721 ZNF608Q9ULD9 1512 aaPredicted RBP36.52■■■■□ 3.44
C1GALT1-203ENST00000419721 WRNQ14191 1432 aaPredicted RBP eCLIP36.48■■■■□ 3.43
C1GALT1-203ENST00000419721 RAD54L2Q9Y4B4 1467 aa36.46■■■■□ 3.43
C1GALT1-203ENST00000419721 SOGA1O94964 1423 aa36.46■■■■□ 3.43
C1GALT1-203ENST00000419721 BIVM-ERCC5R4GMW8 1640 aa36.45■■■■□ 3.43
C1GALT1-203ENST00000419721 EIF4G3O43432 1585 aaKnown RBP36.44■■■■□ 3.42
C1GALT1-203ENST00000419721 TOP2BQ02880 1626 aa36.43■■■■□ 3.42
C1GALT1-203ENST00000419721 SYNJ1O43426 1573 aa36.41■■■■□ 3.42
C1GALT1-203ENST00000419721 WDR97A6NE52 1622 aa36.34■■■■□ 3.41
C1GALT1-203ENST00000419721 AQRO60306 1485 aaKnown RBP eCLIP36.31■■■■□ 3.47e-7■■■□□ 17.3
C1GALT1-203ENST00000419721 DNAJC5Q9H3Z4 198 aa36.29■■■■□ 3.4
C1GALT1-203ENST00000419721 TDRD9Q8NDG6 1382 aaKnown RBP36.24■■■■□ 3.39
C1GALT1-203ENST00000419721 ABCA10Q8WWZ4 1543 aa36.24■■■■□ 3.39
C1GALT1-203ENST00000419721 ABCA5Q8WWZ7 1642 aa36.12■■■■□ 3.37
C1GALT1-203ENST00000419721 GRIN2BQ13224 1484 aa36.06■■■■□ 3.36
C1GALT1-203ENST00000419721 GAPVD1Q14C86 1478 aa36.06■■■■□ 3.36
C1GALT1-203ENST00000419721 PBRM1Q86U86 1689 aa36.06■■■■□ 3.36
C1GALT1-203ENST00000419721 SNAPC4Q5SXM2 1469 aa36■■■■□ 3.35
C1GALT1-203ENST00000419721 MAGI1Q96QZ7 1491 aaPredicted RBP35.98■■■■□ 3.35
C1GALT1-203ENST00000419721 CHD1O14646 1710 aa35.97■■■■□ 3.35
C1GALT1-203ENST00000419721 OSCARQ8IYS5 282 aa35.95■■■■□ 3.35
C1GALT1-203ENST00000419721 SYNJ2O15056 1496 aa35.83■■■■□ 3.33
C1GALT1-203ENST00000419721 ERICH3Q5RHP9 1530 aa35.81■■■■□ 3.32
C1GALT1-203ENST00000419721 FBLN2P98095 1184 aa35.79■■■■□ 3.32
C1GALT1-203ENST00000419721 ADAMTS12P58397 1594 aa35.76■■■■□ 3.31
C1GALT1-203ENST00000419721 CHMP7Q8WUX9 453 aaPredicted RBP35.73■■■■□ 3.31
C1GALT1-203ENST00000419721 KIF27Q86VH2 1401 aa35.7■■■■□ 3.31
C1GALT1-203ENST00000419721 FHAD1B1AJZ9 1412 aa35.66■■■■□ 3.3
C1GALT1-203ENST00000419721 GRIN2AQ12879 1464 aa35.61■■■■□ 3.29
C1GALT1-203ENST00000419721 CLASP1Q7Z460 1538 aa35.58■■■■□ 3.29
C1GALT1-203ENST00000419721 TRIM41Q8WV44 630 aa35.58■■■■□ 3.29
C1GALT1-203ENST00000419721 IGF1RP08069 1367 aa35.53■■■■□ 3.28
C1GALT1-203ENST00000419721 CUL7Q14999 1698 aa35.52■■■■□ 3.28
C1GALT1-203ENST00000419721 RIMBP3CA6NJZ7 1639 aa35.46■■■■□ 3.27
C1GALT1-203ENST00000419721 RIMBP3BA6NNM3 1639 aa35.46■■■■□ 3.27
C1GALT1-203ENST00000419721 RIMBP3Q9UFD9 1639 aa35.46■■■■□ 3.27
C1GALT1-203ENST00000419721 NUP160Q12769 1436 aa35.46■■■■□ 3.27
C1GALT1-203ENST00000419721 CEP170Q5SW79 1584 aa35.45■■■■□ 3.27
C1GALT1-203ENST00000419721 ARHGEF11O15085 1522 aa35.44■■■■□ 3.26
C1GALT1-203ENST00000419721 RUSC2Q8N2Y8 1516 aa35.39■■■■□ 3.26
C1GALT1-203ENST00000419721 CARMIL1Q5VZK9 1371 aa35.32■■■■□ 3.24
C1GALT1-203ENST00000419721 SHROOM2Q13796 1616 aa35.22■■■■□ 3.23
C1GALT1-203ENST00000419721 CHIC1Q5VXU3 224 aa35.21■■■■□ 3.23
C1GALT1-203ENST00000419721 ARAP1Q96P48 1450 aa35.17■■■■□ 3.22
C1GALT1-203ENST00000419721 RAPGEF2Q9Y4G8 1499 aa35.15■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms