RNA–Protein interactions for RNA: ENST00000526477.5

CAPRIN1-203, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 587 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-203ENST00000526477 NISCHQ9Y2I1 1504 aa57.04■■■■■ 6.72
CAPRIN1-203ENST00000526477 CCDC180Q9P1Z9 1646 aa50.65■■■■■ 5.7
CAPRIN1-203ENST00000526477 ABCC9O60706 1549 aa49.47■■■■■ 5.51
CAPRIN1-203ENST00000526477 RB1CC1Q8TDY2 1594 aa47.61■■■■■ 5.21
CAPRIN1-203ENST00000526477 NACADO15069 1562 aa47.58■■■■■ 5.21
CAPRIN1-203ENST00000526477 DCAF8L2P0C7V8 631 aa47.57■■■■■ 5.21
CAPRIN1-203ENST00000526477 ZCCHC6Q5VYS8 1495 aaKnown RBP47.54■■■■■ 5.2
CAPRIN1-203ENST00000526477 MYO15BQ96JP2 1530 aa47.33■■■■■ 5.17
CAPRIN1-203ENST00000526477 DCAF1Q9Y4B6 1507 aa47.18■■■■■ 5.14
CAPRIN1-203ENST00000526477 UNC13AQ9UPW8 1703 aa46.62■■■■■ 5.05
CAPRIN1-203ENST00000526477 SCRIBQ14160 1630 aa46.25■■■■■ 4.99
CAPRIN1-203ENST00000526477 PABPN1Q86U42 306 aaKnown RBP eCLIP46.25■■■■■ 4.99
CAPRIN1-203ENST00000526477 BICRAQ9NZM4 1560 aa46.23■■■■■ 4.99
CAPRIN1-203ENST00000526477 DNAJC5BQ9UF47 199 aa46.18■■■■■ 4.98
CAPRIN1-203ENST00000526477 SHROOM4Q9ULL8 1493 aa45.66■■■■■ 4.9
CAPRIN1-203ENST00000526477 EIF4G1Q04637 1599 aaKnown RBP44.97■■■■■ 4.79
CAPRIN1-203ENST00000526477 CC2D2AQ9P2K1 1620 aa44.76■■■■■ 4.76
CAPRIN1-203ENST00000526477 CECR2Q9BXF3 1484 aa44.46■■■■■ 4.71
CAPRIN1-203ENST00000526477 SMARCA4P51532 1647 aa44.25■■■■■ 4.67
CAPRIN1-203ENST00000526477 BAZ1AQ9NRL2 1556 aaPredicted RBP44.18■■■■■ 4.66
CAPRIN1-203ENST00000526477 MROH2BQ7Z745 1585 aa43.99■■■■■ 4.63
CAPRIN1-203ENST00000526477 ATAD2BQ9ULI0 1458 aa43.96■■■■■ 4.63
CAPRIN1-203ENST00000526477 NCAPD3P42695 1498 aa43.91■■■■■ 4.62
CAPRIN1-203ENST00000526477 SMARCA2P51531 1590 aa43.88■■■■■ 4.62
CAPRIN1-203ENST00000526477 PEG3Q9GZU2 1588 aa43.8■■■■■ 4.6
CAPRIN1-203ENST00000526477 HMGXB3Q12766 1538 aa43.71■■■■■ 4.59
CAPRIN1-203ENST00000526477 BAZ1BQ9UIG0 1483 aaKnown RBP43.59■■■■■ 4.57
CAPRIN1-203ENST00000526477 WIZO95785 1651 aa43.53■■■■■ 4.56
CAPRIN1-203ENST00000526477 RSF1Q96T23 1441 aaPredicted RBP43.5■■■■■ 4.55
CAPRIN1-203ENST00000526477 TOP2AP11388 1531 aaKnown RBP43.04■■■■■ 4.48
CAPRIN1-203ENST00000526477 DNAJC5Q9H3Z4 198 aa42.92■■■■■ 4.46
CAPRIN1-203ENST00000526477 NESP48681 1621 aa42.87■■■■■ 4.45
CAPRIN1-203ENST00000526477 LAMC3Q9Y6N6 1575 aa42.73■■■■■ 4.43
CAPRIN1-203ENST00000526477 CADPSQ9ULU8 1353 aa42.64■■■■■ 4.42
CAPRIN1-203ENST00000526477 ERCC6Q03468 1493 aa42.58■■■■■ 4.41
CAPRIN1-203ENST00000526477 CCDC88BA6NC98 1476 aa42.55■■■■■ 4.4
CAPRIN1-203ENST00000526477 SUPT5HO00267 1087 aaKnown RBP42.47■■■■■ 4.39
CAPRIN1-203ENST00000526477 PDS5BQ9NTI5 1447 aa42.41■■■■■ 4.38
CAPRIN1-203ENST00000526477 CFTRP13569 1480 aa42.41■■■■■ 4.38
CAPRIN1-203ENST00000526477 KIF21AQ7Z4S6 1674 aa42.38■■■■■ 4.37
CAPRIN1-203ENST00000526477 CUX2O14529 1486 aa42.2■■■■■ 4.35
CAPRIN1-203ENST00000526477 THOC2Q8NI27 1593 aaKnown RBP42.19■■■■■ 4.34
CAPRIN1-203ENST00000526477 FANCD2Q9BXW9 1451 aa42.15■■■■■ 4.34
CAPRIN1-203ENST00000526477 PRDM2Q13029 1718 aa42.14■■■■■ 4.34
CAPRIN1-203ENST00000526477 CEP164Q9UPV0 1460 aa42.08■■■■■ 4.33
CAPRIN1-203ENST00000526477 MRC2Q9UBG0 1479 aa42■■■■■ 4.31
CAPRIN1-203ENST00000526477 WDR62O43379 1518 aa41.87■■■■■ 4.29
CAPRIN1-203ENST00000526477 URB2Q14146 1524 aaKnown RBP41.76■■■■■ 4.28
CAPRIN1-203ENST00000526477 TOPBP1Q92547 1522 aa41.51■■■■■ 4.24
CAPRIN1-203ENST00000526477 DNMBPQ6XZF7 1577 aa41.46■■■■■ 4.23
CAPRIN1-203ENST00000526477 ABCC8Q09428 1581 aa41.46■■■■■ 4.23
CAPRIN1-203ENST00000526477 CUX1P39880 1505 aa41.25■■■■■ 4.19
CAPRIN1-203ENST00000526477 IFT140Q96RY7 1462 aa41.19■■■■■ 4.18
CAPRIN1-203ENST00000526477 POLA1P09884 1462 aaPredicted RBP41.16■■■■■ 4.18
CAPRIN1-203ENST00000526477 FGD5Q6ZNL6 1462 aa41.09■■■■■ 4.17
CAPRIN1-203ENST00000526477 TARBP1Q13395 1621 aaKnown RBP41.06■■■■■ 4.16
CAPRIN1-203ENST00000526477 ZNF608Q9ULD9 1512 aaPredicted RBP41.04■■■■■ 4.16
CAPRIN1-203ENST00000526477 RAD54L2Q9Y4B4 1467 aa41■■■■■ 4.15
CAPRIN1-203ENST00000526477 WRNQ14191 1432 aaPredicted RBP eCLIP40.99■■■■■ 4.15
CAPRIN1-203ENST00000526477 SOGA1O94964 1423 aa40.97■■■■■ 4.15
CAPRIN1-203ENST00000526477 SYNJ1O43426 1573 aa40.94■■■■■ 4.14
CAPRIN1-203ENST00000526477 BIVM-ERCC5R4GMW8 1640 aa40.93■■■■■ 4.14
CAPRIN1-203ENST00000526477 TOP2BQ02880 1626 aa40.92■■■■■ 4.14
CAPRIN1-203ENST00000526477 EIF4G3O43432 1585 aaKnown RBP40.87■■■■■ 4.13
CAPRIN1-203ENST00000526477 AQRO60306 1485 aaKnown RBP eCLIP40.82■■■■■ 4.123e-9■■■■■ 39.6
CAPRIN1-203ENST00000526477 WDR97A6NE52 1622 aa40.77■■■■■ 4.12
CAPRIN1-203ENST00000526477 TDRD9Q8NDG6 1382 aaKnown RBP40.74■■■■■ 4.11
CAPRIN1-203ENST00000526477 ABCA10Q8WWZ4 1543 aa40.67■■■■■ 4.1
CAPRIN1-203ENST00000526477 TRIM41Q8WV44 630 aa40.61■■■■■ 4.09
CAPRIN1-203ENST00000526477 ABCA5Q8WWZ7 1642 aa40.53■■■■■ 4.08
CAPRIN1-203ENST00000526477 GAPVD1Q14C86 1478 aa40.51■■■■■ 4.07
CAPRIN1-203ENST00000526477 GRIN2BQ13224 1484 aa40.47■■■■■ 4.07
CAPRIN1-203ENST00000526477 PBRM1Q86U86 1689 aa40.46■■■■■ 4.07
CAPRIN1-203ENST00000526477 SNAPC4Q5SXM2 1469 aa40.44■■■■■ 4.06
CAPRIN1-203ENST00000526477 CHD1O14646 1710 aa40.36■■■■■ 4.05
CAPRIN1-203ENST00000526477 OSCARQ8IYS5 282 aa40.36■■■■■ 4.05
CAPRIN1-203ENST00000526477 MAGI1Q96QZ7 1491 aaPredicted RBP40.35■■■■■ 4.05
CAPRIN1-203ENST00000526477 FBLN2P98095 1184 aa40.25■■■■■ 4.03
CAPRIN1-203ENST00000526477 SYNJ2O15056 1496 aa40.2■■■■■ 4.03
CAPRIN1-203ENST00000526477 ERICH3Q5RHP9 1530 aa40.18■■■■■ 4.02
CAPRIN1-203ENST00000526477 CHMP7Q8WUX9 453 aaPredicted RBP40.16■■■■■ 4.02
CAPRIN1-203ENST00000526477 ADAMTS12P58397 1594 aa40.13■■■■■ 4.01
CAPRIN1-203ENST00000526477 KIF27Q86VH2 1401 aa40.11■■■■■ 4.01
CAPRIN1-203ENST00000526477 FHAD1B1AJZ9 1412 aa40.04■■■■■ 4
CAPRIN1-203ENST00000526477 GRIN2AQ12879 1464 aa39.97■■■■□ 3.99
CAPRIN1-203ENST00000526477 IGF1RP08069 1367 aa39.97■■■■□ 3.99
CAPRIN1-203ENST00000526477 CLASP1Q7Z460 1538 aa39.91■■■■□ 3.98
CAPRIN1-203ENST00000526477 RUSC2Q8N2Y8 1516 aa39.87■■■■□ 3.97
CAPRIN1-203ENST00000526477 CUL7Q14999 1698 aa39.84■■■■□ 3.97
CAPRIN1-203ENST00000526477 NUP160Q12769 1436 aa39.8■■■■□ 3.96
CAPRIN1-203ENST00000526477 CEP170Q5SW79 1584 aa39.8■■■■□ 3.96
CAPRIN1-203ENST00000526477 RIMBP3CA6NJZ7 1639 aa39.77■■■■□ 3.96
CAPRIN1-203ENST00000526477 RIMBP3BA6NNM3 1639 aa39.77■■■■□ 3.96
CAPRIN1-203ENST00000526477 RIMBP3Q9UFD9 1639 aa39.77■■■■□ 3.96
CAPRIN1-203ENST00000526477 ARHGEF11O15085 1522 aa39.75■■■■□ 3.95
CAPRIN1-203ENST00000526477 CHIC1Q5VXU3 224 aa39.72■■■■□ 3.95
CAPRIN1-203ENST00000526477 CARMIL1Q5VZK9 1371 aa39.72■■■■□ 3.95
CAPRIN1-203ENST00000526477 SHROOM2Q13796 1616 aa39.5■■■■□ 3.91
CAPRIN1-203ENST00000526477 RAPGEF2Q9Y4G8 1499 aa39.49■■■■□ 3.91
CAPRIN1-203ENST00000526477 ARAP1Q96P48 1450 aa39.46■■■■□ 3.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms