RNA–Protein interactions for RNA: ENST00000641805.1

MTHFR-216, Transcript of methylenetetrahydrofolate reductase, humanhuman

Gene MTHFR, Length 2,945 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFR-216ENST00000641805 NISCHQ9Y2I1 1504 aa27.57■■■□□ 2
MTHFR-216ENST00000641805 SHROOM4Q9ULL8 1493 aa24.41■■□□□ 1.5
MTHFR-216ENST00000641805 SUPT5HO00267 1087 aaKnown RBP24.15■■□□□ 1.46
MTHFR-216ENST00000641805 HRCP23327 699 aa23.66■■□□□ 1.38
MTHFR-216ENST00000641805 MYO15BQ96JP2 1530 aa23.64■■□□□ 1.38
MTHFR-216ENST00000641805 CHIC1Q5VXU3 224 aa23.53■■□□□ 1.36
MTHFR-216ENST00000641805 PCGF6Q9BYE7 350 aa23.49■■□□□ 1.35
MTHFR-216ENST00000641805 PPARGC1BQ86YN6 1023 aaKnown RBP23.4■■□□□ 1.34
MTHFR-216ENST00000641805 ZCCHC6Q5VYS8 1495 aaKnown RBP23.38■■□□□ 1.33
MTHFR-216ENST00000641805 DCAF8L2P0C7V8 631 aa23.28■■□□□ 1.32
MTHFR-216ENST00000641805 LOC105371045A0A1W2PR82 267 aa23.07■■□□□ 1.28
MTHFR-216ENST00000641805 CCDC180Q9P1Z9 1646 aa22.96■■□□□ 1.27
MTHFR-216ENST00000641805 DCAF1Q9Y4B6 1507 aa22.84■■□□□ 1.25
MTHFR-216ENST00000641805 TRIM26Q12899 539 aaPredicted RBP22.68■■□□□ 1.22
MTHFR-216ENST00000641805 EHMT2Q96KQ7 1210 aa22.4■■□□□ 1.18
MTHFR-216ENST00000641805 FAM9AQ8IZU1 332 aaPredicted RBP22.38■■□□□ 1.17
MTHFR-216ENST00000641805 TRIM41Q8WV44 630 aa22.27■■□□□ 1.16
MTHFR-216ENST00000641805 SCAF1Q9H7N4 1312 aaKnown RBP22.26■■□□□ 1.15
MTHFR-216ENST00000641805 ZEB1P37275 1124 aaPredicted RBP22.25■■□□□ 1.15
MTHFR-216ENST00000641805 ABCC9O60706 1549 aa22.16■■□□□ 1.14
MTHFR-216ENST00000641805 RSF1Q96T23 1441 aaPredicted RBP22.13■■□□□ 1.13
MTHFR-216ENST00000641805 PELP1Q8IZL8 1130 aaKnown RBP22.04■■□□□ 1.12
MTHFR-216ENST00000641805 RB1CC1Q8TDY2 1594 aa22.03■■□□□ 1.12
MTHFR-216ENST00000641805 SCRIBQ14160 1630 aa22.02■■□□□ 1.12
MTHFR-216ENST00000641805 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.93■■□□□ 1.1
MTHFR-216ENST00000641805 NEUROD1Q13562 356 aa21.8■■□□□ 1.08
MTHFR-216ENST00000641805 CCER1Q8TC90 406 aaPredicted RBP21.79■■□□□ 1.08
MTHFR-216ENST00000641805 TTBK1Q5TCY1 1321 aaPredicted RBP21.76■■□□□ 1.07
MTHFR-216ENST00000641805 ACIN1Q9UKV3 1341 aaKnown RBP21.75■■□□□ 1.07
MTHFR-216ENST00000641805 CECR2Q9BXF3 1484 aa21.7■■□□□ 1.06
MTHFR-216ENST00000641805 GTF3C3Q9Y5Q9 886 aa21.63■■□□□ 1.05
MTHFR-216ENST00000641805 DIEXFQ68CQ4 756 aaKnown RBP21.62■■□□□ 1.05
MTHFR-216ENST00000641805 MROH2BQ7Z745 1585 aa21.6■■□□□ 1.05
MTHFR-216ENST00000641805 WIZO95785 1651 aa21.53■■□□□ 1.04
MTHFR-216ENST00000641805 CENPBP07199 599 aaPredicted RBP21.46■■□□□ 1.03
MTHFR-216ENST00000641805 YTHDC1Q96MU7 727 aaKnown RBP21.38■■□□□ 1.01
MTHFR-216ENST00000641805 ABCC8Q09428 1581 aa21.33■■□□□ 1.01
MTHFR-216ENST00000641805 CCDC88BA6NC98 1476 aa21.31■■□□□ 1
MTHFR-216ENST00000641805 CEP162Q5TB80 1403 aa21.29■■□□□ 1
MTHFR-216ENST00000641805 EIF4G1Q04637 1599 aaKnown RBP21.27■■□□□ 1
MTHFR-216ENST00000641805 ZNF316A6NFI3 1004 aaPredicted RBP21.25■□□□□ 0.99
MTHFR-216ENST00000641805 BAZ1AQ9NRL2 1556 aaPredicted RBP21.24■□□□□ 0.99
MTHFR-216ENST00000641805 SOGA1O94964 1423 aa21.24■□□□□ 0.99
MTHFR-216ENST00000641805 WRNQ14191 1432 aaPredicted RBP eCLIP21.22■□□□□ 0.99
MTHFR-216ENST00000641805 UBTFP17480 764 aaKnown RBP21.2■□□□□ 0.98
MTHFR-216ENST00000641805 NACADO15069 1562 aa21.18■□□□□ 0.98
MTHFR-216ENST00000641805 MIER1Q8N108 512 aa21.16■□□□□ 0.98
MTHFR-216ENST00000641805 RUSC2Q8N2Y8 1516 aa21.15■□□□□ 0.98
MTHFR-216ENST00000641805 HNRNPUL2Q1KMD3 747 aaKnown RBP21.14■□□□□ 0.97
MTHFR-216ENST00000641805 TNIKQ9UKE5 1360 aa21.1■□□□□ 0.97
MTHFR-216ENST00000641805 CSRNP3Q8WYN3 585 aa21.08■□□□□ 0.97
MTHFR-216ENST00000641805 TOP2AP11388 1531 aaKnown RBP21■□□□□ 0.95
MTHFR-216ENST00000641805 SMARCA2P51531 1590 aa20.99■□□□□ 0.95
MTHFR-216ENST00000641805 MYT1Q01538 1121 aa20.97■□□□□ 0.95
MTHFR-216ENST00000641805 RANGAP1P46060 587 aaPredicted RBP20.94■□□□□ 0.94
MTHFR-216ENST00000641805 GOLGA3Q08378 1498 aa20.89■□□□□ 0.94
MTHFR-216ENST00000641805 SMARCA4P51532 1647 aa20.89■□□□□ 0.93
MTHFR-216ENST00000641805 EEA1Q15075 1411 aa20.85■□□□□ 0.93
MTHFR-216ENST00000641805 CLIP1P30622 1438 aa20.77■□□□□ 0.92
MTHFR-216ENST00000641805 APLP2Q06481 763 aa20.74■□□□□ 0.91
MTHFR-216ENST00000641805 CEP164Q9UPV0 1460 aa20.7■□□□□ 0.9
MTHFR-216ENST00000641805 PABPN1Q86U42 306 aaKnown RBP eCLIP20.68■□□□□ 0.9
MTHFR-216ENST00000641805 VPS8Q8N3P4 1428 aa20.68■□□□□ 0.9
MTHFR-216ENST00000641805 SYNJ1O43426 1573 aa20.67■□□□□ 0.9
MTHFR-216ENST00000641805 RAPGEF2Q9Y4G8 1499 aa20.64■□□□□ 0.89
MTHFR-216ENST00000641805 SUPT16HQ9Y5B9 1047 aaKnown RBP20.64■□□□□ 0.89
MTHFR-216ENST00000641805 UNC13AQ9UPW8 1703 aa20.62■□□□□ 0.89
MTHFR-216ENST00000641805 KIF21BO75037 1637 aa20.6■□□□□ 0.89
MTHFR-216ENST00000641805 DHX57Q6P158 1386 aaKnown RBP20.57■□□□□ 0.88
MTHFR-216ENST00000641805 KANK4Q5T7N3 995 aaPredicted RBP20.52■□□□□ 0.88
MTHFR-216ENST00000641805 KCNH8Q96L42 1107 aa20.49■□□□□ 0.87
MTHFR-216ENST00000641805 ITGAEP38570 1179 aa20.46■□□□□ 0.87
MTHFR-216ENST00000641805 TSHZ2Q9NRE2 1034 aa20.46■□□□□ 0.87
MTHFR-216ENST00000641805 BAZ1BQ9UIG0 1483 aaKnown RBP20.45■□□□□ 0.86
MTHFR-216ENST00000641805 BCANQ96GW7 911 aa20.4■□□□□ 0.86
MTHFR-216ENST00000641805 CLSPNQ9HAW4 1339 aa20.39■□□□□ 0.86
MTHFR-216ENST00000641805 ARAP1Q96P48 1450 aa20.35■□□□□ 0.85
MTHFR-216ENST00000641805 BICRAQ9NZM4 1560 aa20.33■□□□□ 0.85
MTHFR-216ENST00000641805 PEG3Q9GZU2 1588 aa20.29■□□□□ 0.84
MTHFR-216ENST00000641805 ATAD2BQ9ULI0 1458 aa20.28■□□□□ 0.84
MTHFR-216ENST00000641805 ANP32EQ9BTT0 268 aa20.25■□□□□ 0.83
MTHFR-216ENST00000641805 RRBP1Q9P2E9 1410 aaKnown RBP20.23■□□□□ 0.83
MTHFR-216ENST00000641805 TOP2BQ02880 1626 aa20.23■□□□□ 0.83
MTHFR-216ENST00000641805 FKBP8Q14318 412 aa20.22■□□□□ 0.83
MTHFR-216ENST00000641805 CCNB3Q8WWL7 1395 aa20.22■□□□□ 0.83
MTHFR-216ENST00000641805 DDX10Q13206 875 aaKnown RBP20.22■□□□□ 0.83
MTHFR-216ENST00000641805 PRXQ9BXM0 1461 aa20.21■□□□□ 0.83
MTHFR-216ENST00000641805 HIRIP3Q9BW71 556 aaPredicted RBP20.19■□□□□ 0.82
MTHFR-216ENST00000641805 RAB3GAP2Q9H2M9 1393 aa20.17■□□□□ 0.82
MTHFR-216ENST00000641805 SIN3AQ96ST3 1273 aa20.17■□□□□ 0.82
MTHFR-216ENST00000641805 ERICH3Q5RHP9 1530 aa20.15■□□□□ 0.82
MTHFR-216ENST00000641805 MAPKBP1O60336 1514 aa20.12■□□□□ 0.81
MTHFR-216ENST00000641805 CUX2O14529 1486 aa20.12■□□□□ 0.81
MTHFR-216ENST00000641805 TRIM52Q96A61 297 aa20.1■□□□□ 0.81
MTHFR-216ENST00000641805 ARHGAP35Q9NRY4 1499 aa20.1■□□□□ 0.81
MTHFR-216ENST00000641805 BIVM-ERCC5R4GMW8 1640 aa20.09■□□□□ 0.81
MTHFR-216ENST00000641805 WDR97A6NE52 1622 aa20.07■□□□□ 0.8
MTHFR-216ENST00000641805 FAM50AQ14320 339 aaKnown RBP20.04■□□□□ 0.8
MTHFR-216ENST00000641805 CUX1P39880 1505 aa20.03■□□□□ 0.8
MTHFR-216ENST00000641805 KIF27Q86VH2 1401 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms