RNA–Protein interactions for RNA: ENST00000234626.10

CDC7-201, Transcript of cell division cycle 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC7, Length 3,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-201ENST00000234626 NISCHQ9Y2I1 1504 aa14.82□□□□□ -0.04
CDC7-201ENST00000234626 CCDC180Q9P1Z9 1646 aa13.04□□□□□ -0.32
CDC7-201ENST00000234626 ZCCHC6Q5VYS8 1495 aaKnown RBP12.58□□□□□ -0.4
CDC7-201ENST00000234626 DCAF1Q9Y4B6 1507 aa12.48□□□□□ -0.41
CDC7-201ENST00000234626 MYO15BQ96JP2 1530 aa12.25□□□□□ -0.45
CDC7-201ENST00000234626 NACADO15069 1562 aa11.88□□□□□ -0.51
CDC7-201ENST00000234626 ABCC9O60706 1549 aa11.88□□□□□ -0.51
CDC7-201ENST00000234626 UNC13AQ9UPW8 1703 aa11.75□□□□□ -0.53
CDC7-201ENST00000234626 SHROOM4Q9ULL8 1493 aa11.69□□□□□ -0.54
CDC7-201ENST00000234626 SCRIBQ14160 1630 aa11.65□□□□□ -0.54
CDC7-201ENST00000234626 RB1CC1Q8TDY2 1594 aa11.62□□□□□ -0.55
CDC7-201ENST00000234626 EIF4G1Q04637 1599 aaKnown RBP11.52□□□□□ -0.57
CDC7-201ENST00000234626 RSF1Q96T23 1441 aaPredicted RBP11.51□□□□□ -0.57
CDC7-201ENST00000234626 BAZ1AQ9NRL2 1556 aaPredicted RBP11.47□□□□□ -0.57
CDC7-201ENST00000234626 BICRAQ9NZM4 1560 aa11.45□□□□□ -0.58
CDC7-201ENST00000234626 PEG3Q9GZU2 1588 aa11.42□□□□□ -0.58
CDC7-201ENST00000234626 MROH2BQ7Z745 1585 aa11.4□□□□□ -0.58
CDC7-201ENST00000234626 SMARCA4P51532 1647 aa11.38□□□□□ -0.59
CDC7-201ENST00000234626 WIZO95785 1651 aa11.38□□□□□ -0.59
CDC7-201ENST00000234626 CECR2Q9BXF3 1484 aa11.35□□□□□ -0.59
CDC7-201ENST00000234626 CHIC1Q5VXU3 224 aa11.31□□□□□ -0.6
CDC7-201ENST00000234626 TOP2AP11388 1531 aaKnown RBP11.3□□□□□ -0.6
CDC7-201ENST00000234626 SUPT5HO00267 1087 aaKnown RBP11.3□□□□□ -0.6
CDC7-201ENST00000234626 DCAF8L2P0C7V8 631 aa11.24□□□□□ -0.61
CDC7-201ENST00000234626 SMARCA2P51531 1590 aa11.23□□□□□ -0.61
CDC7-201ENST00000234626 PRDM2Q13029 1718 aa11.08□□□□□ -0.64
CDC7-201ENST00000234626 CCDC88BA6NC98 1476 aa11.06□□□□□ -0.64
CDC7-201ENST00000234626 HMGXB3Q12766 1538 aa11.02□□□□□ -0.64
CDC7-201ENST00000234626 ATAD2BQ9ULI0 1458 aa10.99□□□□□ -0.65
CDC7-201ENST00000234626 BIVM-ERCC5R4GMW8 1640 aa10.96□□□□□ -0.65
CDC7-201ENST00000234626 NCAPD3P42695 1498 aa10.9□□□□□ -0.66
CDC7-201ENST00000234626 ABCC8Q09428 1581 aa10.88□□□□□ -0.67
CDC7-201ENST00000234626 SYNJ1O43426 1573 aa10.86□□□□□ -0.67
CDC7-201ENST00000234626 TOP2BQ02880 1626 aa10.86□□□□□ -0.67
CDC7-201ENST00000234626 KIF21BO75037 1637 aa10.85□□□□□ -0.67
CDC7-201ENST00000234626 BAZ1BQ9UIG0 1483 aaKnown RBP10.83□□□□□ -0.68
CDC7-201ENST00000234626 EEA1Q15075 1411 aa10.82□□□□□ -0.68
CDC7-201ENST00000234626 WRNQ14191 1432 aaPredicted RBP eCLIP10.77□□□□□ -0.69
CDC7-201ENST00000234626 CFTRP13569 1480 aa10.73□□□□□ -0.69
CDC7-201ENST00000234626 TRIM41Q8WV44 630 aa10.71□□□□□ -0.69
CDC7-201ENST00000234626 LOC105371045A0A1W2PR82 267 aa10.71□□□□□ -0.7
CDC7-201ENST00000234626 ERICH3Q5RHP9 1530 aa10.68□□□□□ -0.7
CDC7-201ENST00000234626 CUX1P39880 1505 aa10.67□□□□□ -0.7
CDC7-201ENST00000234626 PABPN1Q86U42 306 aaKnown RBP eCLIP10.67□□□□□ -0.7
CDC7-201ENST00000234626 SOGA1O94964 1423 aa10.66□□□□□ -0.7
CDC7-201ENST00000234626 RUSC2Q8N2Y8 1516 aa10.66□□□□□ -0.7
CDC7-201ENST00000234626 WDR97A6NE52 1622 aa10.66□□□□□ -0.7
CDC7-201ENST00000234626 CC2D2AQ9P2K1 1620 aa10.66□□□□□ -0.7
CDC7-201ENST00000234626 TNIKQ9UKE5 1360 aa10.66□□□□□ -0.7
CDC7-201ENST00000234626 GOLGA3Q08378 1498 aa10.61□□□□□ -0.71
CDC7-201ENST00000234626 HRCP23327 699 aa10.61□□□□□ -0.71
CDC7-201ENST00000234626 PRXQ9BXM0 1461 aa10.6□□□□□ -0.71
CDC7-201ENST00000234626 CEP164Q9UPV0 1460 aa10.59□□□□□ -0.71
CDC7-201ENST00000234626 CEP162Q5TB80 1403 aa10.55□□□□□ -0.72
CDC7-201ENST00000234626 TRIM26Q12899 539 aaPredicted RBP10.55□□□□□ -0.72
CDC7-201ENST00000234626 LAMC3Q9Y6N6 1575 aa10.53□□□□□ -0.72
CDC7-201ENST00000234626 DNMBPQ6XZF7 1577 aa10.51□□□□□ -0.73
CDC7-201ENST00000234626 RAPGEF2Q9Y4G8 1499 aa10.48□□□□□ -0.73
CDC7-201ENST00000234626 CADPSQ9ULU8 1353 aa10.47□□□□□ -0.73
CDC7-201ENST00000234626 CSRNP3Q8WYN3 585 aa10.47□□□□□ -0.73
CDC7-201ENST00000234626 ABCA5Q8WWZ7 1642 aa10.46□□□□□ -0.73
CDC7-201ENST00000234626 CUL7Q14999 1698 aa10.45□□□□□ -0.74
CDC7-201ENST00000234626 CTTNBP2Q8WZ74 1663 aa10.45□□□□□ -0.74
CDC7-201ENST00000234626 MAP3K1Q13233 1512 aa10.43□□□□□ -0.74
CDC7-201ENST00000234626 ABCA10Q8WWZ4 1543 aa10.43□□□□□ -0.74
CDC7-201ENST00000234626 ARAP1Q96P48 1450 aa10.43□□□□□ -0.74
CDC7-201ENST00000234626 KIF21AQ7Z4S6 1674 aa10.42□□□□□ -0.74
CDC7-201ENST00000234626 CFAP43Q8NDM7 1665 aa10.41□□□□□ -0.74
CDC7-201ENST00000234626 PCGF6Q9BYE7 350 aa10.41□□□□□ -0.74
CDC7-201ENST00000234626 VPS8Q8N3P4 1428 aa10.41□□□□□ -0.74
CDC7-201ENST00000234626 TARBP1Q13395 1621 aaKnown RBP10.4□□□□□ -0.74
CDC7-201ENST00000234626 FGD5Q6ZNL6 1462 aa10.39□□□□□ -0.75
CDC7-201ENST00000234626 TOPBP1Q92547 1522 aa10.38□□□□□ -0.75
CDC7-201ENST00000234626 KIF27Q86VH2 1401 aa10.37□□□□□ -0.75
CDC7-201ENST00000234626 FANCD2Q9BXW9 1451 aa10.37□□□□□ -0.75
CDC7-201ENST00000234626 CLIP1P30622 1438 aa10.37□□□□□ -0.75
CDC7-201ENST00000234626 SAMD9Q5K651 1589 aa10.35□□□□□ -0.75
CDC7-201ENST00000234626 LRRIQ1Q96JM4 1722 aa10.35□□□□□ -0.75
CDC7-201ENST00000234626 PBRM1Q86U86 1689 aa10.34□□□□□ -0.75
CDC7-201ENST00000234626 URB2Q14146 1524 aaKnown RBP10.34□□□□□ -0.75
CDC7-201ENST00000234626 CUX2O14529 1486 aa10.33□□□□□ -0.76
CDC7-201ENST00000234626 POLA1P09884 1462 aaPredicted RBP10.33□□□□□ -0.76
CDC7-201ENST00000234626 ARHGAP35Q9NRY4 1499 aa10.33□□□□□ -0.76
CDC7-201ENST00000234626 IGF1RP08069 1367 aa10.32□□□□□ -0.76
CDC7-201ENST00000234626 FAM9AQ8IZU1 332 aaPredicted RBP10.32□□□□□ -0.76
CDC7-201ENST00000234626 EFCAB5A4FU69 1503 aa10.3□□□□□ -0.76
CDC7-201ENST00000234626 AQRO60306 1485 aaKnown RBP eCLIP10.29□□□□□ -0.76
CDC7-201ENST00000234626 NESP48681 1621 aa10.27□□□□□ -0.76
CDC7-201ENST00000234626 TIAM1Q13009 1591 aa10.27□□□□□ -0.76
CDC7-201ENST00000234626 RRBP1Q9P2E9 1410 aaKnown RBP10.27□□□□□ -0.77
CDC7-201ENST00000234626 ZEB1P37275 1124 aaPredicted RBP10.26□□□□□ -0.77
CDC7-201ENST00000234626 WDR62O43379 1518 aa10.25□□□□□ -0.77
CDC7-201ENST00000234626 THOC2Q8NI27 1593 aaKnown RBP10.25□□□□□ -0.77
CDC7-201ENST00000234626 ADAMTS12P58397 1594 aa10.22□□□□□ -0.77
CDC7-201ENST00000234626 PCF11O94913 1555 aaKnown RBP10.21□□□□□ -0.77
CDC7-201ENST00000234626 SNAPC4Q5SXM2 1469 aa10.2□□□□□ -0.78
CDC7-201ENST00000234626 RAD54L2Q9Y4B4 1467 aa10.18□□□□□ -0.78
CDC7-201ENST00000234626 ARHGEF11O15085 1522 aa10.18□□□□□ -0.78
CDC7-201ENST00000234626 FYCO1Q9BQS8 1478 aa10.18□□□□□ -0.78
CDC7-201ENST00000234626 PDS5BQ9NTI5 1447 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms