RNA–Protein interactions for RNA: ENST00000428239.5

CDC7-203, Transcript of cell division cycle 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC7, Length 3,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-203ENST00000428239 NISCHQ9Y2I1 1504 aa16.18■□□□□ 0.18
CDC7-203ENST00000428239 CCDC180Q9P1Z9 1646 aa14.19□□□□□ -0.14
CDC7-203ENST00000428239 ABCC9O60706 1549 aa14.06□□□□□ -0.16
CDC7-203ENST00000428239 DCAF8L2P0C7V8 631 aa13.98□□□□□ -0.17
CDC7-203ENST00000428239 ZCCHC6Q5VYS8 1495 aaKnown RBP13.47□□□□□ -0.25
CDC7-203ENST00000428239 RB1CC1Q8TDY2 1594 aa13.43□□□□□ -0.26
CDC7-203ENST00000428239 NACADO15069 1562 aa13.39□□□□□ -0.27
CDC7-203ENST00000428239 PABPN1Q86U42 306 aaKnown RBP eCLIP13.27□□□□□ -0.29
CDC7-203ENST00000428239 DCAF1Q9Y4B6 1507 aa13.25□□□□□ -0.29
CDC7-203ENST00000428239 SHROOM4Q9ULL8 1493 aa13.25□□□□□ -0.29
CDC7-203ENST00000428239 MYO15BQ96JP2 1530 aa13.23□□□□□ -0.29
CDC7-203ENST00000428239 SCRIBQ14160 1630 aa13.19□□□□□ -0.3
CDC7-203ENST00000428239 UNC13AQ9UPW8 1703 aa12.95□□□□□ -0.34
CDC7-203ENST00000428239 BICRAQ9NZM4 1560 aa12.89□□□□□ -0.35
CDC7-203ENST00000428239 DNAJC5BQ9UF47 199 aa12.7□□□□□ -0.38
CDC7-203ENST00000428239 CECR2Q9BXF3 1484 aa12.66□□□□□ -0.38
CDC7-203ENST00000428239 EIF4G1Q04637 1599 aaKnown RBP12.65□□□□□ -0.38
CDC7-203ENST00000428239 SUPT5HO00267 1087 aaKnown RBP12.62□□□□□ -0.39
CDC7-203ENST00000428239 CC2D2AQ9P2K1 1620 aa12.57□□□□□ -0.4
CDC7-203ENST00000428239 BAZ1AQ9NRL2 1556 aaPredicted RBP12.56□□□□□ -0.4
CDC7-203ENST00000428239 SMARCA4P51532 1647 aa12.51□□□□□ -0.41
CDC7-203ENST00000428239 MROH2BQ7Z745 1585 aa12.51□□□□□ -0.41
CDC7-203ENST00000428239 ATAD2BQ9ULI0 1458 aa12.45□□□□□ -0.42
CDC7-203ENST00000428239 BAZ1BQ9UIG0 1483 aaKnown RBP12.44□□□□□ -0.42
CDC7-203ENST00000428239 RSF1Q96T23 1441 aaPredicted RBP12.44□□□□□ -0.42
CDC7-203ENST00000428239 SMARCA2P51531 1590 aa12.44□□□□□ -0.42
CDC7-203ENST00000428239 WIZO95785 1651 aa12.37□□□□□ -0.43
CDC7-203ENST00000428239 NCAPD3P42695 1498 aa12.37□□□□□ -0.43
CDC7-203ENST00000428239 HMGXB3Q12766 1538 aa12.28□□□□□ -0.44
CDC7-203ENST00000428239 PEG3Q9GZU2 1588 aa12.25□□□□□ -0.45
CDC7-203ENST00000428239 TOP2AP11388 1531 aaKnown RBP12.22□□□□□ -0.45
CDC7-203ENST00000428239 ERCC6Q03468 1493 aa12.17□□□□□ -0.46
CDC7-203ENST00000428239 CCDC88BA6NC98 1476 aa12.14□□□□□ -0.47
CDC7-203ENST00000428239 NESP48681 1621 aa12.14□□□□□ -0.47
CDC7-203ENST00000428239 CADPSQ9ULU8 1353 aa12.12□□□□□ -0.47
CDC7-203ENST00000428239 PDS5BQ9NTI5 1447 aa12.07□□□□□ -0.48
CDC7-203ENST00000428239 LAMC3Q9Y6N6 1575 aa12.02□□□□□ -0.49
CDC7-203ENST00000428239 CFTRP13569 1480 aa12□□□□□ -0.49
CDC7-203ENST00000428239 FANCD2Q9BXW9 1451 aa11.99□□□□□ -0.49
CDC7-203ENST00000428239 CEP164Q9UPV0 1460 aa11.98□□□□□ -0.49
CDC7-203ENST00000428239 KIF21AQ7Z4S6 1674 aa11.88□□□□□ -0.51
CDC7-203ENST00000428239 MRC2Q9UBG0 1479 aa11.88□□□□□ -0.51
CDC7-203ENST00000428239 TRIM41Q8WV44 630 aa11.84□□□□□ -0.51
CDC7-203ENST00000428239 WRNQ14191 1432 aaPredicted RBP eCLIP11.81□□□□□ -0.52
CDC7-203ENST00000428239 ABCC8Q09428 1581 aa11.8□□□□□ -0.52
CDC7-203ENST00000428239 URB2Q14146 1524 aaKnown RBP11.79□□□□□ -0.52
CDC7-203ENST00000428239 TOPBP1Q92547 1522 aa11.77□□□□□ -0.52
CDC7-203ENST00000428239 CUX2O14529 1486 aa11.76□□□□□ -0.53
CDC7-203ENST00000428239 PRDM2Q13029 1718 aa11.76□□□□□ -0.53
CDC7-203ENST00000428239 THOC2Q8NI27 1593 aaKnown RBP11.75□□□□□ -0.53
CDC7-203ENST00000428239 FBLN2P98095 1184 aa11.74□□□□□ -0.53
CDC7-203ENST00000428239 SOGA1O94964 1423 aa11.74□□□□□ -0.53
CDC7-203ENST00000428239 WDR62O43379 1518 aa11.73□□□□□ -0.53
CDC7-203ENST00000428239 DNMBPQ6XZF7 1577 aa11.73□□□□□ -0.53
CDC7-203ENST00000428239 FGD5Q6ZNL6 1462 aa11.72□□□□□ -0.53
CDC7-203ENST00000428239 FAM9AQ8IZU1 332 aaPredicted RBP11.72□□□□□ -0.53
CDC7-203ENST00000428239 CUX1P39880 1505 aa11.71□□□□□ -0.53
CDC7-203ENST00000428239 TDRD9Q8NDG6 1382 aaKnown RBP11.71□□□□□ -0.54
CDC7-203ENST00000428239 RAD54L2Q9Y4B4 1467 aa11.7□□□□□ -0.54
CDC7-203ENST00000428239 POLA1P09884 1462 aaPredicted RBP11.69□□□□□ -0.54
CDC7-203ENST00000428239 EHMT2Q96KQ7 1210 aa11.67□□□□□ -0.54
CDC7-203ENST00000428239 IFT140Q96RY7 1462 aa11.67□□□□□ -0.54
CDC7-203ENST00000428239 CHIC1Q5VXU3 224 aa11.67□□□□□ -0.54
CDC7-203ENST00000428239 SYNJ1O43426 1573 aa11.66□□□□□ -0.54
CDC7-203ENST00000428239 AQRO60306 1485 aaKnown RBP eCLIP11.64□□□□□ -0.55
CDC7-203ENST00000428239 ZNF608Q9ULD9 1512 aaPredicted RBP11.63□□□□□ -0.55
CDC7-203ENST00000428239 CHMP7Q8WUX9 453 aaPredicted RBP11.62□□□□□ -0.55
CDC7-203ENST00000428239 TOP2BQ02880 1626 aa11.61□□□□□ -0.55
CDC7-203ENST00000428239 KIF27Q86VH2 1401 aa11.57□□□□□ -0.56
CDC7-203ENST00000428239 GAPVD1Q14C86 1478 aa11.57□□□□□ -0.56
CDC7-203ENST00000428239 BIVM-ERCC5R4GMW8 1640 aa11.55□□□□□ -0.56
CDC7-203ENST00000428239 ABCA10Q8WWZ4 1543 aa11.53□□□□□ -0.56
CDC7-203ENST00000428239 GRIN2BQ13224 1484 aa11.53□□□□□ -0.56
CDC7-203ENST00000428239 EIF4G3O43432 1585 aaKnown RBP11.52□□□□□ -0.56
CDC7-203ENST00000428239 RANGAP1P46060 587 aaPredicted RBP11.52□□□□□ -0.57
CDC7-203ENST00000428239 TARBP1Q13395 1621 aaKnown RBP11.52□□□□□ -0.57
CDC7-203ENST00000428239 OSCARQ8IYS5 282 aa11.52□□□□□ -0.57
CDC7-203ENST00000428239 SNAPC4Q5SXM2 1469 aa11.51□□□□□ -0.57
CDC7-203ENST00000428239 CSRNP3Q8WYN3 585 aa11.48□□□□□ -0.57
CDC7-203ENST00000428239 TTBK1Q5TCY1 1321 aaPredicted RBP11.47□□□□□ -0.57
CDC7-203ENST00000428239 UBTFP17480 764 aaKnown RBP11.47□□□□□ -0.57
CDC7-203ENST00000428239 RUSC2Q8N2Y8 1516 aa11.46□□□□□ -0.57
CDC7-203ENST00000428239 CARMIL1Q5VZK9 1371 aa11.45□□□□□ -0.58
CDC7-203ENST00000428239 IGF1RP08069 1367 aa11.44□□□□□ -0.58
CDC7-203ENST00000428239 MAGI1Q96QZ7 1491 aaPredicted RBP11.43□□□□□ -0.58
CDC7-203ENST00000428239 FHAD1B1AJZ9 1412 aa11.42□□□□□ -0.58
CDC7-203ENST00000428239 SYNJ2O15056 1496 aa11.41□□□□□ -0.58
CDC7-203ENST00000428239 ABCA5Q8WWZ7 1642 aa11.41□□□□□ -0.58
CDC7-203ENST00000428239 PBRM1Q86U86 1689 aa11.39□□□□□ -0.59
CDC7-203ENST00000428239 WDR97A6NE52 1622 aa11.39□□□□□ -0.59
CDC7-203ENST00000428239 ERICH3Q5RHP9 1530 aa11.39□□□□□ -0.59
CDC7-203ENST00000428239 EEA1Q15075 1411 aa11.39□□□□□ -0.59
CDC7-203ENST00000428239 GRIN2AQ12879 1464 aa11.36□□□□□ -0.59
CDC7-203ENST00000428239 RAPGEF2Q9Y4G8 1499 aa11.35□□□□□ -0.59
CDC7-203ENST00000428239 DNAJC5Q9H3Z4 198 aa11.34□□□□□ -0.59
CDC7-203ENST00000428239 ADAMTS12P58397 1594 aa11.34□□□□□ -0.59
CDC7-203ENST00000428239 CHD1O14646 1710 aa11.33□□□□□ -0.6
CDC7-203ENST00000428239 P3H3Q8IVL6 736 aa11.32□□□□□ -0.6
CDC7-203ENST00000428239 JPH4Q96JJ6 628 aa11.32□□□□□ -0.6
CDC7-203ENST00000428239 CUL7Q14999 1698 aa11.31□□□□□ -0.6
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