RNA–Protein interactions for RNA: ENST00000429911.5

C1GALT1-204, Transcript of core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, humanhuman

TSL 5

Gene C1GALT1, Length 802 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1GALT1-204ENST00000429911 NISCHQ9Y2I1 1504 aa23.91■■□□□ 1.42
C1GALT1-204ENST00000429911 AEBP2Q6ZN18 517 aaPredicted RBP23.07■■□□□ 1.28
C1GALT1-204ENST00000429911 CHIC1Q5VXU3 224 aa21.97■■□□□ 1.11
C1GALT1-204ENST00000429911 CCDC180Q9P1Z9 1646 aa20.63■□□□□ 0.89
C1GALT1-204ENST00000429911 ZCCHC6Q5VYS8 1495 aaKnown RBP20.2■□□□□ 0.82
C1GALT1-204ENST00000429911 SHROOM4Q9ULL8 1493 aa19.92■□□□□ 0.78
C1GALT1-204ENST00000429911 DCAF1Q9Y4B6 1507 aa19.81■□□□□ 0.76
C1GALT1-204ENST00000429911 DCAF8L2P0C7V8 631 aa19.57■□□□□ 0.72
C1GALT1-204ENST00000429911 SUPT5HO00267 1087 aaKnown RBP19.52■□□□□ 0.72
C1GALT1-204ENST00000429911 SENP3Q9H4L4 574 aaPredicted RBP19.5■□□□□ 0.71
C1GALT1-204ENST00000429911 PHF23Q9BUL5 403 aaPredicted RBP19.36■□□□□ 0.69
C1GALT1-204ENST00000429911 MYO15BQ96JP2 1530 aa19.33■□□□□ 0.68
C1GALT1-204ENST00000429911 ABCC9O60706 1549 aa19.07■□□□□ 0.64
C1GALT1-204ENST00000429911 NACADO15069 1562 aa19.05■□□□□ 0.64
C1GALT1-204ENST00000429911 SCRIBQ14160 1630 aa19.01■□□□□ 0.63
C1GALT1-204ENST00000429911 RSF1Q96T23 1441 aaPredicted RBP18.76■□□□□ 0.59
C1GALT1-204ENST00000429911 RB1CC1Q8TDY2 1594 aa18.75■□□□□ 0.59
C1GALT1-204ENST00000429911 MROH2BQ7Z745 1585 aa18.47■□□□□ 0.55
C1GALT1-204ENST00000429911 CECR2Q9BXF3 1484 aa18.46■□□□□ 0.55
C1GALT1-204ENST00000429911 BAZ1AQ9NRL2 1556 aaPredicted RBP18.46■□□□□ 0.55
C1GALT1-204ENST00000429911 WIZO95785 1651 aa18.38■□□□□ 0.53
C1GALT1-204ENST00000429911 TRIM41Q8WV44 630 aa18.35■□□□□ 0.53
C1GALT1-204ENST00000429911 UNC13AQ9UPW8 1703 aa18.35■□□□□ 0.53
C1GALT1-204ENST00000429911 SMARCA4P51532 1647 aa18.27■□□□□ 0.51
C1GALT1-204ENST00000429911 LOC105371045A0A1W2PR82 267 aa18.26■□□□□ 0.51
C1GALT1-204ENST00000429911 FOXD1Q16676 465 aa18.26■□□□□ 0.51
C1GALT1-204ENST00000429911 TOP2AP11388 1531 aaKnown RBP18.23■□□□□ 0.51
C1GALT1-204ENST00000429911 HRCP23327 699 aa18.2■□□□□ 0.5
C1GALT1-204ENST00000429911 PCGF6Q9BYE7 350 aa18.17■□□□□ 0.5
C1GALT1-204ENST00000429911 EIF4G1Q04637 1599 aaKnown RBP18.14■□□□□ 0.49
C1GALT1-204ENST00000429911 TRIM26Q12899 539 aaPredicted RBP18.08■□□□□ 0.48
C1GALT1-204ENST00000429911 BICRAQ9NZM4 1560 aa18.06■□□□□ 0.48
C1GALT1-204ENST00000429911 SMARCA2P51531 1590 aa18.05■□□□□ 0.48
C1GALT1-204ENST00000429911 CCDC88BA6NC98 1476 aa18.02■□□□□ 0.48
C1GALT1-204ENST00000429911 PEG3Q9GZU2 1588 aa18■□□□□ 0.47
C1GALT1-204ENST00000429911 FAM9AQ8IZU1 332 aaPredicted RBP17.99■□□□□ 0.47
C1GALT1-204ENST00000429911 PABPN1Q86U42 306 aaKnown RBP eCLIP17.88■□□□□ 0.457e-9■■■□□ 17.2
C1GALT1-204ENST00000429911 EEA1Q15075 1411 aa17.86■□□□□ 0.45
C1GALT1-204ENST00000429911 ABCC8Q09428 1581 aa17.83■□□□□ 0.45
C1GALT1-204ENST00000429911 ZEB1P37275 1124 aaPredicted RBP17.8■□□□□ 0.44
C1GALT1-204ENST00000429911 ATAD2BQ9ULI0 1458 aa17.77■□□□□ 0.44
C1GALT1-204ENST00000429911 BAZ1BQ9UIG0 1483 aaKnown RBP17.76■□□□□ 0.43
C1GALT1-204ENST00000429911 WRNQ14191 1432 aaPredicted RBP eCLIP17.7■□□□□ 0.42
C1GALT1-204ENST00000429911 EHMT2Q96KQ7 1210 aa17.69■□□□□ 0.42
C1GALT1-204ENST00000429911 TNIKQ9UKE5 1360 aa17.66■□□□□ 0.42
C1GALT1-204ENST00000429911 CSRNP3Q8WYN3 585 aa17.63■□□□□ 0.41
C1GALT1-204ENST00000429911 SOGA1O94964 1423 aa17.62■□□□□ 0.41
C1GALT1-204ENST00000429911 GOLGA3Q08378 1498 aa17.61■□□□□ 0.41
C1GALT1-204ENST00000429911 HMGXB3Q12766 1538 aa17.59■□□□□ 0.41
C1GALT1-204ENST00000429911 CEP162Q5TB80 1403 aa17.58■□□□□ 0.41
C1GALT1-204ENST00000429911 PLPPR3Q6T4P5 718 aa17.57■□□□□ 0.4
C1GALT1-204ENST00000429911 PPARGC1BQ86YN6 1023 aaKnown RBP17.56■□□□□ 0.4
C1GALT1-204ENST00000429911 SYNJ1O43426 1573 aa17.56■□□□□ 0.4
C1GALT1-204ENST00000429911 KIF21BO75037 1637 aa17.55■□□□□ 0.4
C1GALT1-204ENST00000429911 CEP164Q9UPV0 1460 aa17.54■□□□□ 0.4
C1GALT1-204ENST00000429911 NCAPD3P42695 1498 aa17.52■□□□□ 0.4
C1GALT1-204ENST00000429911 RUSC2Q8N2Y8 1516 aa17.49■□□□□ 0.39
C1GALT1-204ENST00000429911 UBTFP17480 764 aaKnown RBP17.49■□□□□ 0.39
C1GALT1-204ENST00000429911 TOP2BQ02880 1626 aa17.48■□□□□ 0.39
C1GALT1-204ENST00000429911 BIVM-ERCC5R4GMW8 1640 aa17.47■□□□□ 0.39
C1GALT1-204ENST00000429911 PRDM2Q13029 1718 aa17.37■□□□□ 0.37
C1GALT1-204ENST00000429911 ERICH3Q5RHP9 1530 aa17.31■□□□□ 0.36
C1GALT1-204ENST00000429911 CLIP1P30622 1438 aa17.31■□□□□ 0.36
C1GALT1-204ENST00000429911 CFTRP13569 1480 aa17.31■□□□□ 0.36
C1GALT1-204ENST00000429911 CCER1Q8TC90 406 aaPredicted RBP17.27■□□□□ 0.36
C1GALT1-204ENST00000429911 PPP6R1Q9UPN7 881 aa17.26■□□□□ 0.35
C1GALT1-204ENST00000429911 VPS8Q8N3P4 1428 aa17.26■□□□□ 0.35
C1GALT1-204ENST00000429911 RAPGEF2Q9Y4G8 1499 aa17.24■□□□□ 0.35
C1GALT1-204ENST00000429911 CUX1P39880 1505 aa17.24■□□□□ 0.35
C1GALT1-204ENST00000429911 KIF27Q86VH2 1401 aa17.22■□□□□ 0.35
C1GALT1-204ENST00000429911 APLP2Q06481 763 aa17.22■□□□□ 0.35
C1GALT1-204ENST00000429911 PRXQ9BXM0 1461 aa17.2■□□□□ 0.34
C1GALT1-204ENST00000429911 ADRA2BP18089 450 aa17.19■□□□□ 0.34
C1GALT1-204ENST00000429911 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.16■□□□□ 0.34
C1GALT1-204ENST00000429911 CADPSQ9ULU8 1353 aa17.13■□□□□ 0.33
C1GALT1-204ENST00000429911 TTBK1Q5TCY1 1321 aaPredicted RBP17.12■□□□□ 0.33
C1GALT1-204ENST00000429911 CC2D2AQ9P2K1 1620 aa17.1■□□□□ 0.33
C1GALT1-204ENST00000429911 PIAS4Q8N2W9 510 aaPredicted RBP17.05■□□□□ 0.32
C1GALT1-204ENST00000429911 ARAP1Q96P48 1450 aa17.03■□□□□ 0.32
C1GALT1-204ENST00000429911 CUX2O14529 1486 aa17■□□□□ 0.31
C1GALT1-204ENST00000429911 FGD5Q6ZNL6 1462 aa16.98■□□□□ 0.31
C1GALT1-204ENST00000429911 FANCD2Q9BXW9 1451 aa16.96■□□□□ 0.31
C1GALT1-204ENST00000429911 DNMBPQ6XZF7 1577 aa16.95■□□□□ 0.3
C1GALT1-204ENST00000429911 RANGAP1P46060 587 aaPredicted RBP16.95■□□□□ 0.3
C1GALT1-204ENST00000429911 IGF1RP08069 1367 aa16.93■□□□□ 0.3
C1GALT1-204ENST00000429911 HNRNPUL2Q1KMD3 747 aaKnown RBP16.91■□□□□ 0.3
C1GALT1-204ENST00000429911 MSH5O43196 834 aa16.9■□□□□ 0.3
C1GALT1-204ENST00000429911 ARHGAP35Q9NRY4 1499 aa16.9■□□□□ 0.3
C1GALT1-204ENST00000429911 CARMIL1Q5VZK9 1371 aa16.89■□□□□ 0.3
C1GALT1-204ENST00000429911 LAMC3Q9Y6N6 1575 aa16.89■□□□□ 0.29
C1GALT1-204ENST00000429911 MAP3K1Q13233 1512 aa16.88■□□□□ 0.29
C1GALT1-204ENST00000429911 CLSPNQ9HAW4 1339 aa16.86■□□□□ 0.29
C1GALT1-204ENST00000429911 CUL7Q14999 1698 aa16.85■□□□□ 0.29
C1GALT1-204ENST00000429911 ABCA10Q8WWZ4 1543 aa16.85■□□□□ 0.29
C1GALT1-204ENST00000429911 TOPBP1Q92547 1522 aa16.84■□□□□ 0.29
C1GALT1-204ENST00000429911 DIEXFQ68CQ4 756 aaKnown RBP16.83■□□□□ 0.28
C1GALT1-204ENST00000429911 RRBP1Q9P2E9 1410 aaKnown RBP16.83■□□□□ 0.28
C1GALT1-204ENST00000429911 ZNF316A6NFI3 1004 aaPredicted RBP16.82■□□□□ 0.28
C1GALT1-204ENST00000429911 FHAD1B1AJZ9 1412 aa16.81■□□□□ 0.28
C1GALT1-204ENST00000429911 TIAM1Q13009 1591 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms