RNA–Protein interactions for RNA: ENST00000641407.1

MTHFR-210, Transcript of methylenetetrahydrofolate reductase, humanhuman

BASIC

Gene MTHFR, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFR-210ENST00000641407 NISCHQ9Y2I1 1504 aa32.68■■■□□ 2.82
MTHFR-210ENST00000641407 CCDC180Q9P1Z9 1646 aa28.04■■■□□ 2.08
MTHFR-210ENST00000641407 ZCCHC6Q5VYS8 1495 aaKnown RBP27.56■■■□□ 2
MTHFR-210ENST00000641407 SHROOM4Q9ULL8 1493 aa27.43■■□□□ 1.98
MTHFR-210ENST00000641407 DCAF8L2P0C7V8 631 aa27.15■■□□□ 1.94
MTHFR-210ENST00000641407 DCAF1Q9Y4B6 1507 aa26.84■■□□□ 1.89
MTHFR-210ENST00000641407 SUPT5HO00267 1087 aaKnown RBP26.65■■□□□ 1.86
MTHFR-210ENST00000641407 ABCC9O60706 1549 aa26.37■■□□□ 1.81
MTHFR-210ENST00000641407 MYO15BQ96JP2 1530 aa26.26■■□□□ 1.79
MTHFR-210ENST00000641407 SCRIBQ14160 1630 aa26.17■■□□□ 1.78
MTHFR-210ENST00000641407 NACADO15069 1562 aa26.04■■□□□ 1.76
MTHFR-210ENST00000641407 RB1CC1Q8TDY2 1594 aa25.72■■□□□ 1.71
MTHFR-210ENST00000641407 CHIC1Q5VXU3 224 aa25.69■■□□□ 1.7
MTHFR-210ENST00000641407 RSF1Q96T23 1441 aaPredicted RBP25.65■■□□□ 1.7
MTHFR-210ENST00000641407 CECR2Q9BXF3 1484 aa25.51■■□□□ 1.67
MTHFR-210ENST00000641407 MROH2BQ7Z745 1585 aa25.37■■□□□ 1.65
MTHFR-210ENST00000641407 UNC13AQ9UPW8 1703 aa25.3■■□□□ 1.64
MTHFR-210ENST00000641407 WIZO95785 1651 aa25.2■■□□□ 1.62
MTHFR-210ENST00000641407 BAZ1AQ9NRL2 1556 aaPredicted RBP25.14■■□□□ 1.62
MTHFR-210ENST00000641407 PABPN1Q86U42 306 aaKnown RBP eCLIP25.09■■□□□ 1.61
MTHFR-210ENST00000641407 BICRAQ9NZM4 1560 aa25.03■■□□□ 1.6
MTHFR-210ENST00000641407 SMARCA4P51532 1647 aa24.99■■□□□ 1.59
MTHFR-210ENST00000641407 LOC105371045A0A1W2PR82 267 aa24.88■■□□□ 1.57
MTHFR-210ENST00000641407 TRIM41Q8WV44 630 aa24.87■■□□□ 1.57
MTHFR-210ENST00000641407 TOP2AP11388 1531 aaKnown RBP24.83■■□□□ 1.57
MTHFR-210ENST00000641407 CCDC88BA6NC98 1476 aa24.69■■□□□ 1.54
MTHFR-210ENST00000641407 EIF4G1Q04637 1599 aaKnown RBP24.67■■□□□ 1.54
MTHFR-210ENST00000641407 SMARCA2P51531 1590 aa24.67■■□□□ 1.54
MTHFR-210ENST00000641407 FAM9AQ8IZU1 332 aaPredicted RBP24.64■■□□□ 1.53
MTHFR-210ENST00000641407 PEG3Q9GZU2 1588 aa24.55■■□□□ 1.52
MTHFR-210ENST00000641407 ATAD2BQ9ULI0 1458 aa24.47■■□□□ 1.51
MTHFR-210ENST00000641407 ABCC8Q09428 1581 aa24.45■■□□□ 1.5
MTHFR-210ENST00000641407 EHMT2Q96KQ7 1210 aa24.42■■□□□ 1.5
MTHFR-210ENST00000641407 BAZ1BQ9UIG0 1483 aaKnown RBP24.38■■□□□ 1.49
MTHFR-210ENST00000641407 PCGF6Q9BYE7 350 aa24.34■■□□□ 1.49
MTHFR-210ENST00000641407 SOGA1O94964 1423 aa24.12■■□□□ 1.45
MTHFR-210ENST00000641407 WRNQ14191 1432 aaPredicted RBP eCLIP24.11■■□□□ 1.45
MTHFR-210ENST00000641407 NCAPD3P42695 1498 aa24.09■■□□□ 1.45
MTHFR-210ENST00000641407 HMGXB3Q12766 1538 aa24.06■■□□□ 1.44
MTHFR-210ENST00000641407 SYNJ1O43426 1573 aa24.02■■□□□ 1.44
MTHFR-210ENST00000641407 RUSC2Q8N2Y8 1516 aa24.02■■□□□ 1.44
MTHFR-210ENST00000641407 TRIM26Q12899 539 aaPredicted RBP24■■□□□ 1.43
MTHFR-210ENST00000641407 HRCP23327 699 aa23.99■■□□□ 1.43
MTHFR-210ENST00000641407 EEA1Q15075 1411 aa23.93■■□□□ 1.42
MTHFR-210ENST00000641407 CSRNP3Q8WYN3 585 aa23.92■■□□□ 1.42
MTHFR-210ENST00000641407 PPARGC1BQ86YN6 1023 aaKnown RBP23.78■■□□□ 1.4
MTHFR-210ENST00000641407 CEP162Q5TB80 1403 aa23.78■■□□□ 1.4
MTHFR-210ENST00000641407 TOP2BQ02880 1626 aa23.77■■□□□ 1.4
MTHFR-210ENST00000641407 TNIKQ9UKE5 1360 aa23.77■■□□□ 1.4
MTHFR-210ENST00000641407 UBTFP17480 764 aaKnown RBP23.76■■□□□ 1.39
MTHFR-210ENST00000641407 CFTRP13569 1480 aa23.75■■□□□ 1.39
MTHFR-210ENST00000641407 CC2D2AQ9P2K1 1620 aa23.75■■□□□ 1.39
MTHFR-210ENST00000641407 GOLGA3Q08378 1498 aa23.74■■□□□ 1.39
MTHFR-210ENST00000641407 BIVM-ERCC5R4GMW8 1640 aa23.7■■□□□ 1.38
MTHFR-210ENST00000641407 CUX1P39880 1505 aa23.66■■□□□ 1.38
MTHFR-210ENST00000641407 CEP164Q9UPV0 1460 aa23.66■■□□□ 1.38
MTHFR-210ENST00000641407 KIF21BO75037 1637 aa23.63■■□□□ 1.37
MTHFR-210ENST00000641407 CADPSQ9ULU8 1353 aa23.58■■□□□ 1.37
MTHFR-210ENST00000641407 RAPGEF2Q9Y4G8 1499 aa23.56■■□□□ 1.36
MTHFR-210ENST00000641407 PRDM2Q13029 1718 aa23.53■■□□□ 1.36
MTHFR-210ENST00000641407 TTBK1Q5TCY1 1321 aaPredicted RBP23.51■■□□□ 1.35
MTHFR-210ENST00000641407 CLIP1P30622 1438 aa23.45■■□□□ 1.34
MTHFR-210ENST00000641407 RANGAP1P46060 587 aaPredicted RBP23.42■■□□□ 1.34
MTHFR-210ENST00000641407 KIF27Q86VH2 1401 aa23.42■■□□□ 1.34
MTHFR-210ENST00000641407 PRXQ9BXM0 1461 aa23.4■■□□□ 1.34
MTHFR-210ENST00000641407 FANCD2Q9BXW9 1451 aa23.36■■□□□ 1.33
MTHFR-210ENST00000641407 ERICH3Q5RHP9 1530 aa23.35■■□□□ 1.33
MTHFR-210ENST00000641407 NESP48681 1621 aa23.34■■□□□ 1.33
MTHFR-210ENST00000641407 FGD5Q6ZNL6 1462 aa23.32■■□□□ 1.32
MTHFR-210ENST00000641407 CUX2O14529 1486 aa23.3■■□□□ 1.32
MTHFR-210ENST00000641407 VPS8Q8N3P4 1428 aa23.28■■□□□ 1.32
MTHFR-210ENST00000641407 DNAJC5BQ9UF47 199 aa23.27■■□□□ 1.32
MTHFR-210ENST00000641407 ZEB1P37275 1124 aaPredicted RBP23.23■■□□□ 1.31
MTHFR-210ENST00000641407 IGF1RP08069 1367 aa23.2■■□□□ 1.3
MTHFR-210ENST00000641407 DNMBPQ6XZF7 1577 aa23.17■■□□□ 1.3
MTHFR-210ENST00000641407 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.16■■□□□ 1.3
MTHFR-210ENST00000641407 TOPBP1Q92547 1522 aa23.16■■□□□ 1.3
MTHFR-210ENST00000641407 ARAP1Q96P48 1450 aa23.14■■□□□ 1.29
MTHFR-210ENST00000641407 LAMC3Q9Y6N6 1575 aa23.14■■□□□ 1.29
MTHFR-210ENST00000641407 RAD54L2Q9Y4B4 1467 aa23.13■■□□□ 1.29
MTHFR-210ENST00000641407 POLA1P09884 1462 aaPredicted RBP23.11■■□□□ 1.29
MTHFR-210ENST00000641407 APLP2Q06481 763 aa23.11■■□□□ 1.29
MTHFR-210ENST00000641407 CARMIL1Q5VZK9 1371 aa23.09■■□□□ 1.29
MTHFR-210ENST00000641407 CCER1Q8TC90 406 aaPredicted RBP23.06■■□□□ 1.28
MTHFR-210ENST00000641407 URB2Q14146 1524 aaKnown RBP23.06■■□□□ 1.28
MTHFR-210ENST00000641407 ABCA10Q8WWZ4 1543 aa23.04■■□□□ 1.28
MTHFR-210ENST00000641407 ARHGAP35Q9NRY4 1499 aa23.02■■□□□ 1.28
MTHFR-210ENST00000641407 PDS5BQ9NTI5 1447 aa23■■□□□ 1.27
MTHFR-210ENST00000641407 KIF21AQ7Z4S6 1674 aa22.94■■□□□ 1.26
MTHFR-210ENST00000641407 HNRNPUL2Q1KMD3 747 aaKnown RBP22.93■■□□□ 1.26
MTHFR-210ENST00000641407 KANK4Q5T7N3 995 aaPredicted RBP22.91■■□□□ 1.26
MTHFR-210ENST00000641407 TDRD9Q8NDG6 1382 aaKnown RBP22.88■■□□□ 1.25
MTHFR-210ENST00000641407 WDR97A6NE52 1622 aa22.87■■□□□ 1.25
MTHFR-210ENST00000641407 CUL7Q14999 1698 aa22.82■■□□□ 1.24
MTHFR-210ENST00000641407 ABCA5Q8WWZ7 1642 aa22.8■■□□□ 1.24
MTHFR-210ENST00000641407 P3H3Q8IVL6 736 aa22.8■■□□□ 1.24
MTHFR-210ENST00000641407 GAPVD1Q14C86 1478 aa22.78■■□□□ 1.24
MTHFR-210ENST00000641407 TARBP1Q13395 1621 aaKnown RBP22.72■■□□□ 1.23
MTHFR-210ENST00000641407 FHOD3Q2V2M9 1422 aa22.71■■□□□ 1.23
MTHFR-210ENST00000641407 MRC2Q9UBG0 1479 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms