RNA–Protein interactions for RNA: ENST00000476068.1

C1GALT1-207, Transcript of core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, humanhuman

TSL 1 (best)

Gene C1GALT1, Length 1,186 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1GALT1-207ENST00000476068 NISCHQ9Y2I1 1504 aa32.97■■■□□ 2.87
C1GALT1-207ENST00000476068 ABCC9O60706 1549 aa30.52■■■□□ 2.48
C1GALT1-207ENST00000476068 CCDC180Q9P1Z9 1646 aa29.89■■■□□ 2.38
C1GALT1-207ENST00000476068 DNAJC5BQ9UF47 199 aa29.19■■■□□ 2.26
C1GALT1-207ENST00000476068 RB1CC1Q8TDY2 1594 aa28.74■■■□□ 2.19
C1GALT1-207ENST00000476068 NACADO15069 1562 aa28.37■■■□□ 2.13
C1GALT1-207ENST00000476068 PABPN1Q86U42 306 aaKnown RBP eCLIP28.28■■■□□ 2.12
C1GALT1-207ENST00000476068 UNC13AQ9UPW8 1703 aa28.2■■■□□ 2.1
C1GALT1-207ENST00000476068 DCAF8L2P0C7V8 631 aa28.06■■■□□ 2.08
C1GALT1-207ENST00000476068 BICRAQ9NZM4 1560 aa27.98■■■□□ 2.07
C1GALT1-207ENST00000476068 MYO15BQ96JP2 1530 aa27.74■■■□□ 2.03
C1GALT1-207ENST00000476068 CC2D2AQ9P2K1 1620 aa27.55■■■□□ 2
C1GALT1-207ENST00000476068 CECR2Q9BXF3 1484 aa27.54■■■□□ 2
C1GALT1-207ENST00000476068 SHROOM4Q9ULL8 1493 aa27.44■■□□□ 1.98
C1GALT1-207ENST00000476068 EIF4G1Q04637 1599 aaKnown RBP27.31■■□□□ 1.96
C1GALT1-207ENST00000476068 SCRIBQ14160 1630 aa27.23■■□□□ 1.95
C1GALT1-207ENST00000476068 DNAJC5Q9H3Z4 198 aa27.22■■□□□ 1.95
C1GALT1-207ENST00000476068 ZCCHC6Q5VYS8 1495 aaKnown RBP27.19■■□□□ 1.94
C1GALT1-207ENST00000476068 DCAF1Q9Y4B6 1507 aa27.16■■□□□ 1.94
C1GALT1-207ENST00000476068 CUX2O14529 1486 aa26.53■■□□□ 1.84
C1GALT1-207ENST00000476068 ERCC6Q03468 1493 aa26.36■■□□□ 1.81
C1GALT1-207ENST00000476068 NCAPD3P42695 1498 aa26.18■■□□□ 1.78
C1GALT1-207ENST00000476068 NESP48681 1621 aa26.05■■□□□ 1.76
C1GALT1-207ENST00000476068 ATAD2BQ9ULI0 1458 aa26.04■■□□□ 1.76
C1GALT1-207ENST00000476068 HMGXB3Q12766 1538 aa25.97■■□□□ 1.75
C1GALT1-207ENST00000476068 THOC2Q8NI27 1593 aaKnown RBP25.94■■□□□ 1.74
C1GALT1-207ENST00000476068 SMARCA2P51531 1590 aa25.92■■□□□ 1.74
C1GALT1-207ENST00000476068 SMARCA4P51532 1647 aa25.89■■□□□ 1.74
C1GALT1-207ENST00000476068 TRIM41Q8WV44 630 aa25.8■■□□□ 1.72
C1GALT1-207ENST00000476068 BAZ1BQ9UIG0 1483 aaKnown RBP25.75■■□□□ 1.71
C1GALT1-207ENST00000476068 KIF21AQ7Z4S6 1674 aa25.74■■□□□ 1.71
C1GALT1-207ENST00000476068 LAMC3Q9Y6N6 1575 aa25.73■■□□□ 1.71
C1GALT1-207ENST00000476068 BAZ1AQ9NRL2 1556 aaPredicted RBP25.62■■□□□ 1.69
C1GALT1-207ENST00000476068 PEG3Q9GZU2 1588 aa25.61■■□□□ 1.69
C1GALT1-207ENST00000476068 PDS5BQ9NTI5 1447 aa25.55■■□□□ 1.68
C1GALT1-207ENST00000476068 MRC2Q9UBG0 1479 aa25.42■■□□□ 1.66
C1GALT1-207ENST00000476068 MROH2BQ7Z745 1585 aa25.42■■□□□ 1.66
C1GALT1-207ENST00000476068 WDR62O43379 1518 aa25.4■■□□□ 1.66
C1GALT1-207ENST00000476068 CADPSQ9ULU8 1353 aa25.35■■□□□ 1.65
C1GALT1-207ENST00000476068 CEP164Q9UPV0 1460 aa25.19■■□□□ 1.62
C1GALT1-207ENST00000476068 OSCARQ8IYS5 282 aa25.16■■□□□ 1.62
C1GALT1-207ENST00000476068 WIZO95785 1651 aa25.11■■□□□ 1.61
C1GALT1-207ENST00000476068 FANCD2Q9BXW9 1451 aa25.1■■□□□ 1.61
C1GALT1-207ENST00000476068 RIMBP3CA6NJZ7 1639 aa25.02■■□□□ 1.6
C1GALT1-207ENST00000476068 RIMBP3BA6NNM3 1639 aa25.02■■□□□ 1.6
C1GALT1-207ENST00000476068 RIMBP3Q9UFD9 1639 aa25.02■■□□□ 1.6
C1GALT1-207ENST00000476068 URB2Q14146 1524 aaKnown RBP24.96■■□□□ 1.59
C1GALT1-207ENST00000476068 CFTRP13569 1480 aa24.95■■□□□ 1.58
C1GALT1-207ENST00000476068 ARHGEF11O15085 1522 aa24.85■■□□□ 1.57
C1GALT1-207ENST00000476068 ZNF608Q9ULD9 1512 aaPredicted RBP24.76■■□□□ 1.55
C1GALT1-207ENST00000476068 PRDM2Q13029 1718 aa24.74■■□□□ 1.55
C1GALT1-207ENST00000476068 TOP2AP11388 1531 aaKnown RBP24.71■■□□□ 1.55
C1GALT1-207ENST00000476068 IFT140Q96RY7 1462 aa24.69■■□□□ 1.54
C1GALT1-207ENST00000476068 CYB5RLQ6IPT4 315 aa24.65■■□□□ 1.54
C1GALT1-207ENST00000476068 RSF1Q96T23 1441 aaPredicted RBP24.62■■□□□ 1.53
C1GALT1-207ENST00000476068 EIF4G3O43432 1585 aaKnown RBP24.62■■□□□ 1.53
C1GALT1-207ENST00000476068 CHD1O14646 1710 aa24.58■■□□□ 1.53
C1GALT1-207ENST00000476068 TOPBP1Q92547 1522 aa24.57■■□□□ 1.52
C1GALT1-207ENST00000476068 TRHP20396 242 aaPredicted RBP24.57■■□□□ 1.52
C1GALT1-207ENST00000476068 ARAP1Q96P48 1450 aa24.57■■□□□ 1.52
C1GALT1-207ENST00000476068 AQRO60306 1485 aaKnown RBP eCLIP24.44■■□□□ 1.57e-7■■■□□ 17.3
C1GALT1-207ENST00000476068 CCDC88BA6NC98 1476 aa24.43■■□□□ 1.5
C1GALT1-207ENST00000476068 TARBP1Q13395 1621 aaKnown RBP24.43■■□□□ 1.5
C1GALT1-207ENST00000476068 DNMBPQ6XZF7 1577 aa24.42■■□□□ 1.5
C1GALT1-207ENST00000476068 ABCC8Q09428 1581 aa24.4■■□□□ 1.5
C1GALT1-207ENST00000476068 FBLN2P98095 1184 aa24.36■■□□□ 1.49
C1GALT1-207ENST00000476068 AEBP2Q6ZN18 517 aaPredicted RBP24.32■■□□□ 1.48
C1GALT1-207ENST00000476068 POLA1P09884 1462 aaPredicted RBP24.27■■□□□ 1.48
C1GALT1-207ENST00000476068 CLASP1Q7Z460 1538 aa24.25■■□□□ 1.47
C1GALT1-207ENST00000476068 RAD54L2Q9Y4B4 1467 aa24.2■■□□□ 1.47
C1GALT1-207ENST00000476068 SNAPC4Q5SXM2 1469 aa24.18■■□□□ 1.46
C1GALT1-207ENST00000476068 TDRD9Q8NDG6 1382 aaKnown RBP24.16■■□□□ 1.46
C1GALT1-207ENST00000476068 SYNJ1O43426 1573 aa24.14■■□□□ 1.45
C1GALT1-207ENST00000476068 SOGA1O94964 1423 aa24.11■■□□□ 1.45
C1GALT1-207ENST00000476068 WDR97A6NE52 1622 aa24.08■■□□□ 1.45
C1GALT1-207ENST00000476068 MAGI1Q96QZ7 1491 aaPredicted RBP24.06■■□□□ 1.44
C1GALT1-207ENST00000476068 CHMP7Q8WUX9 453 aaPredicted RBP24.05■■□□□ 1.44
C1GALT1-207ENST00000476068 FGD5Q6ZNL6 1462 aa24.03■■□□□ 1.44
C1GALT1-207ENST00000476068 GAPVD1Q14C86 1478 aa24■■□□□ 1.43
C1GALT1-207ENST00000476068 SYNJ2O15056 1496 aa23.99■■□□□ 1.43
C1GALT1-207ENST00000476068 GRIN2BQ13224 1484 aa23.99■■□□□ 1.43
C1GALT1-207ENST00000476068 PBRM1Q86U86 1689 aa23.94■■□□□ 1.42
C1GALT1-207ENST00000476068 CUX1P39880 1505 aa23.93■■□□□ 1.42
C1GALT1-207ENST00000476068 ERCC6L2Q5T890 1561 aa23.85■■□□□ 1.41
C1GALT1-207ENST00000476068 ABCA5Q8WWZ7 1642 aa23.78■■□□□ 1.4
C1GALT1-207ENST00000476068 KIF13AQ9H1H9 1805 aa23.73■■□□□ 1.39
C1GALT1-207ENST00000476068 CEP170Q5SW79 1584 aa23.72■■□□□ 1.39
C1GALT1-207ENST00000476068 ABCA10Q8WWZ4 1543 aa23.7■■□□□ 1.38
C1GALT1-207ENST00000476068 GRIN2AQ12879 1464 aa23.7■■□□□ 1.38
C1GALT1-207ENST00000476068 SHROOM2Q13796 1616 aa23.65■■□□□ 1.38
C1GALT1-207ENST00000476068 ADAMTS12P58397 1594 aa23.65■■□□□ 1.38
C1GALT1-207ENST00000476068 NUP160Q12769 1436 aa23.64■■□□□ 1.37
C1GALT1-207ENST00000476068 FHAD1B1AJZ9 1412 aa23.48■■□□□ 1.35
C1GALT1-207ENST00000476068 PRG4Q92954 1404 aaPredicted RBP23.46■■□□□ 1.35
C1GALT1-207ENST00000476068 WRNQ14191 1432 aaPredicted RBP eCLIP23.45■■□□□ 1.34
C1GALT1-207ENST00000476068 ABCC10Q5T3U5 1492 aa23.44■■□□□ 1.34
C1GALT1-207ENST00000476068 FAM69CQ0P6D2 419 aa23.42■■□□□ 1.34
C1GALT1-207ENST00000476068 DIP2BQ9P265 1576 aa23.41■■□□□ 1.34
C1GALT1-207ENST00000476068 KDM4FA0A1W2PPD8 638 aa23.4■■□□□ 1.34
C1GALT1-207ENST00000476068 MAPKBP1O60336 1514 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms