RNA–Protein interactions for RNA: ENST00000641759.1

MTHFR-215, Transcript of methylenetetrahydrofolate reductase, humanhuman

Gene MTHFR, Length 2,454 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFR-215ENST00000641759 NISCHQ9Y2I1 1504 aa25.58■■□□□ 1.68
MTHFR-215ENST00000641759 SHROOM4Q9ULL8 1493 aa22.22■■□□□ 1.15
MTHFR-215ENST00000641759 SUPT5HO00267 1087 aaKnown RBP21.89■■□□□ 1.1
MTHFR-215ENST00000641759 ZCCHC6Q5VYS8 1495 aaKnown RBP21.62■■□□□ 1.05
MTHFR-215ENST00000641759 DCAF8L2P0C7V8 631 aa21.56■■□□□ 1.04
MTHFR-215ENST00000641759 CCDC180Q9P1Z9 1646 aa21.49■■□□□ 1.03
MTHFR-215ENST00000641759 CHIC1Q5VXU3 224 aa21.24■□□□□ 0.99
MTHFR-215ENST00000641759 MYO15BQ96JP2 1530 aa21.16■□□□□ 0.98
MTHFR-215ENST00000641759 PCGF6Q9BYE7 350 aa20.86■□□□□ 0.93
MTHFR-215ENST00000641759 HRCP23327 699 aa20.84■□□□□ 0.93
MTHFR-215ENST00000641759 DCAF1Q9Y4B6 1507 aa20.84■□□□□ 0.93
MTHFR-215ENST00000641759 LOC105371045A0A1W2PR82 267 aa20.76■□□□□ 0.91
MTHFR-215ENST00000641759 PPARGC1BQ86YN6 1023 aaKnown RBP20.53■□□□□ 0.88
MTHFR-215ENST00000641759 SCRIBQ14160 1630 aa20.39■□□□□ 0.85
MTHFR-215ENST00000641759 ABCC9O60706 1549 aa20.39■□□□□ 0.85
MTHFR-215ENST00000641759 RSF1Q96T23 1441 aaPredicted RBP20.38■□□□□ 0.85
MTHFR-215ENST00000641759 TRIM26Q12899 539 aaPredicted RBP20.3■□□□□ 0.84
MTHFR-215ENST00000641759 TRIM41Q8WV44 630 aa20.3■□□□□ 0.84
MTHFR-215ENST00000641759 FAM9AQ8IZU1 332 aaPredicted RBP20.27■□□□□ 0.83
MTHFR-215ENST00000641759 EHMT2Q96KQ7 1210 aa20.2■□□□□ 0.82
MTHFR-215ENST00000641759 RB1CC1Q8TDY2 1594 aa20.14■□□□□ 0.82
MTHFR-215ENST00000641759 CECR2Q9BXF3 1484 aa20.06■□□□□ 0.8
MTHFR-215ENST00000641759 MROH2BQ7Z745 1585 aa19.95■□□□□ 0.78
MTHFR-215ENST00000641759 NACADO15069 1562 aa19.91■□□□□ 0.78
MTHFR-215ENST00000641759 ZEB1P37275 1124 aaPredicted RBP19.84■□□□□ 0.77
MTHFR-215ENST00000641759 WIZO95785 1651 aa19.83■□□□□ 0.77
MTHFR-215ENST00000641759 BAZ1AQ9NRL2 1556 aaPredicted RBP19.6■□□□□ 0.73
MTHFR-215ENST00000641759 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.58■□□□□ 0.73
MTHFR-215ENST00000641759 TTBK1Q5TCY1 1321 aaPredicted RBP19.55■□□□□ 0.72
MTHFR-215ENST00000641759 ABCC8Q09428 1581 aa19.51■□□□□ 0.71
MTHFR-215ENST00000641759 CCER1Q8TC90 406 aaPredicted RBP19.5■□□□□ 0.71
MTHFR-215ENST00000641759 CCDC88BA6NC98 1476 aa19.49■□□□□ 0.71
MTHFR-215ENST00000641759 EIF4G1Q04637 1599 aaKnown RBP19.49■□□□□ 0.71
MTHFR-215ENST00000641759 TOP2AP11388 1531 aaKnown RBP19.43■□□□□ 0.7
MTHFR-215ENST00000641759 SOGA1O94964 1423 aa19.41■□□□□ 0.7
MTHFR-215ENST00000641759 SMARCA4P51532 1647 aa19.4■□□□□ 0.7
MTHFR-215ENST00000641759 PABPN1Q86U42 306 aaKnown RBP eCLIP19.4■□□□□ 0.7
MTHFR-215ENST00000641759 SMARCA2P51531 1590 aa19.37■□□□□ 0.69
MTHFR-215ENST00000641759 UBTFP17480 764 aaKnown RBP19.35■□□□□ 0.69
MTHFR-215ENST00000641759 SCAF1Q9H7N4 1312 aaKnown RBP19.35■□□□□ 0.69
MTHFR-215ENST00000641759 CEP162Q5TB80 1403 aa19.34■□□□□ 0.69
MTHFR-215ENST00000641759 CSRNP3Q8WYN3 585 aa19.33■□□□□ 0.68
MTHFR-215ENST00000641759 RUSC2Q8N2Y8 1516 aa19.31■□□□□ 0.68
MTHFR-215ENST00000641759 TNIKQ9UKE5 1360 aa19.26■□□□□ 0.67
MTHFR-215ENST00000641759 UNC13AQ9UPW8 1703 aa19.26■□□□□ 0.67
MTHFR-215ENST00000641759 WRNQ14191 1432 aaPredicted RBP eCLIP19.26■□□□□ 0.67
MTHFR-215ENST00000641759 DIEXFQ68CQ4 756 aaKnown RBP19.17■□□□□ 0.66
MTHFR-215ENST00000641759 EEA1Q15075 1411 aa19.15■□□□□ 0.66
MTHFR-215ENST00000641759 NEUROD1Q13562 356 aa19.1■□□□□ 0.65
MTHFR-215ENST00000641759 GOLGA3Q08378 1498 aa19.09■□□□□ 0.65
MTHFR-215ENST00000641759 BICRAQ9NZM4 1560 aa19.08■□□□□ 0.65
MTHFR-215ENST00000641759 ACIN1Q9UKV3 1341 aaKnown RBP19.08■□□□□ 0.64
MTHFR-215ENST00000641759 RANGAP1P46060 587 aaPredicted RBP19.07■□□□□ 0.64
MTHFR-215ENST00000641759 HNRNPUL2Q1KMD3 747 aaKnown RBP19.05■□□□□ 0.64
MTHFR-215ENST00000641759 SYNJ1O43426 1573 aa18.98■□□□□ 0.63
MTHFR-215ENST00000641759 CEP164Q9UPV0 1460 aa18.96■□□□□ 0.63
MTHFR-215ENST00000641759 CLIP1P30622 1438 aa18.95■□□□□ 0.62
MTHFR-215ENST00000641759 ZNF316A6NFI3 1004 aaPredicted RBP18.95■□□□□ 0.62
MTHFR-215ENST00000641759 PEG3Q9GZU2 1588 aa18.95■□□□□ 0.62
MTHFR-215ENST00000641759 ATAD2BQ9ULI0 1458 aa18.94■□□□□ 0.62
MTHFR-215ENST00000641759 PELP1Q8IZL8 1130 aaKnown RBP18.94■□□□□ 0.62
MTHFR-215ENST00000641759 GTF3C3Q9Y5Q9 886 aa18.93■□□□□ 0.62
MTHFR-215ENST00000641759 CENPBP07199 599 aaPredicted RBP18.92■□□□□ 0.62
MTHFR-215ENST00000641759 APLP2Q06481 763 aa18.91■□□□□ 0.62
MTHFR-215ENST00000641759 BAZ1BQ9UIG0 1483 aaKnown RBP18.9■□□□□ 0.62
MTHFR-215ENST00000641759 RAPGEF2Q9Y4G8 1499 aa18.89■□□□□ 0.61
MTHFR-215ENST00000641759 KIF21BO75037 1637 aa18.84■□□□□ 0.61
MTHFR-215ENST00000641759 VPS8Q8N3P4 1428 aa18.84■□□□□ 0.61
MTHFR-215ENST00000641759 YTHDC1Q96MU7 727 aaKnown RBP18.83■□□□□ 0.61
MTHFR-215ENST00000641759 MIER1Q8N108 512 aa18.77■□□□□ 0.6
MTHFR-215ENST00000641759 TOP2BQ02880 1626 aa18.68■□□□□ 0.58
MTHFR-215ENST00000641759 KANK4Q5T7N3 995 aaPredicted RBP18.67■□□□□ 0.58
MTHFR-215ENST00000641759 PRXQ9BXM0 1461 aa18.6■□□□□ 0.57
MTHFR-215ENST00000641759 ARAP1Q96P48 1450 aa18.57■□□□□ 0.56
MTHFR-215ENST00000641759 BIVM-ERCC5R4GMW8 1640 aa18.54■□□□□ 0.56
MTHFR-215ENST00000641759 DHX57Q6P158 1386 aaKnown RBP18.54■□□□□ 0.56
MTHFR-215ENST00000641759 CUX1P39880 1505 aa18.54■□□□□ 0.56
MTHFR-215ENST00000641759 ITGAEP38570 1179 aa18.53■□□□□ 0.56
MTHFR-215ENST00000641759 ERICH3Q5RHP9 1530 aa18.52■□□□□ 0.56
MTHFR-215ENST00000641759 KIF27Q86VH2 1401 aa18.52■□□□□ 0.56
MTHFR-215ENST00000641759 NCAPD3P42695 1498 aa18.51■□□□□ 0.55
MTHFR-215ENST00000641759 CLSPNQ9HAW4 1339 aa18.47■□□□□ 0.55
MTHFR-215ENST00000641759 CFTRP13569 1480 aa18.43■□□□□ 0.54
MTHFR-215ENST00000641759 HMGXB3Q12766 1538 aa18.42■□□□□ 0.54
MTHFR-215ENST00000641759 ARHGAP35Q9NRY4 1499 aa18.41■□□□□ 0.54
MTHFR-215ENST00000641759 RRBP1Q9P2E9 1410 aaKnown RBP18.4■□□□□ 0.54
MTHFR-215ENST00000641759 CCNB3Q8WWL7 1395 aa18.4■□□□□ 0.54
MTHFR-215ENST00000641759 IGF1RP08069 1367 aa18.36■□□□□ 0.53
MTHFR-215ENST00000641759 CUX2O14529 1486 aa18.34■□□□□ 0.53
MTHFR-215ENST00000641759 P3H3Q8IVL6 736 aa18.31■□□□□ 0.52
MTHFR-215ENST00000641759 ATP1B4Q9UN42 357 aaPredicted RBP18.3■□□□□ 0.52
MTHFR-215ENST00000641759 CARMIL1Q5VZK9 1371 aa18.28■□□□□ 0.52
MTHFR-215ENST00000641759 RAB3GAP2Q9H2M9 1393 aa18.28■□□□□ 0.52
MTHFR-215ENST00000641759 FAM50AQ14320 339 aaKnown RBP18.26■□□□□ 0.51
MTHFR-215ENST00000641759 CADPSQ9ULU8 1353 aa18.24■□□□□ 0.51
MTHFR-215ENST00000641759 KCNH8Q96L42 1107 aa18.21■□□□□ 0.51
MTHFR-215ENST00000641759 SIN3AQ96ST3 1273 aa18.21■□□□□ 0.5
MTHFR-215ENST00000641759 PHLDB1Q86UU1 1377 aa18.2■□□□□ 0.5
MTHFR-215ENST00000641759 FGD5Q6ZNL6 1462 aa18.2■□□□□ 0.5
MTHFR-215ENST00000641759 TIAM1Q13009 1591 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms