RNA–Protein interactions for RNA: ENST00000598059.5

SYMPK-208, Transcript of symplekin, humanhuman

TSL 4

Gene SYMPK, Length 611 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-208ENST00000598059 NISCHQ9Y2I1 1504 aa53.21■■■■■ 6.11
SYMPK-208ENST00000598059 CCDC180Q9P1Z9 1646 aa47.66■■■■■ 5.22
SYMPK-208ENST00000598059 ABCC9O60706 1549 aa47.46■■■■■ 5.19
SYMPK-208ENST00000598059 RB1CC1Q8TDY2 1594 aa45.27■■■■■ 4.84
SYMPK-208ENST00000598059 NACADO15069 1562 aa45.01■■■■■ 4.8
SYMPK-208ENST00000598059 DCAF8L2P0C7V8 631 aa44.81■■■■■ 4.76
SYMPK-208ENST00000598059 MYO15BQ96JP2 1530 aa44.47■■■■■ 4.71
SYMPK-208ENST00000598059 DNAJC5BQ9UF47 199 aa44.37■■■■■ 4.69
SYMPK-208ENST00000598059 UNC13AQ9UPW8 1703 aa44.28■■■■■ 4.68
SYMPK-208ENST00000598059 PABPN1Q86U42 306 aaKnown RBP eCLIP44.22■■■■■ 4.67
SYMPK-208ENST00000598059 ZCCHC6Q5VYS8 1495 aaKnown RBP44.14■■■■■ 4.66
SYMPK-208ENST00000598059 DCAF1Q9Y4B6 1507 aa43.97■■■■■ 4.63
SYMPK-208ENST00000598059 BICRAQ9NZM4 1560 aa43.96■■■■■ 4.63
SYMPK-208ENST00000598059 SCRIBQ14160 1630 aa43.43■■■■■ 4.54
SYMPK-208ENST00000598059 SHROOM4Q9ULL8 1493 aa43.38■■■■■ 4.54
SYMPK-208ENST00000598059 CC2D2AQ9P2K1 1620 aa42.89■■■■■ 4.46
SYMPK-208ENST00000598059 EIF4G1Q04637 1599 aaKnown RBP42.86■■■■■ 4.45
SYMPK-208ENST00000598059 CECR2Q9BXF3 1484 aa42.74■■■■■ 4.43
SYMPK-208ENST00000598059 NCAPD3P42695 1498 aa41.56■■■■■ 4.24
SYMPK-208ENST00000598059 SMARCA4P51532 1647 aa41.46■■■■■ 4.23
SYMPK-208ENST00000598059 ATAD2BQ9ULI0 1458 aa41.46■■■■■ 4.23
SYMPK-208ENST00000598059 SMARCA2P51531 1590 aa41.35■■■■■ 4.21
SYMPK-208ENST00000598059 BAZ1AQ9NRL2 1556 aaPredicted RBP41.29■■■■■ 4.2
SYMPK-208ENST00000598059 HMGXB3Q12766 1538 aa41.26■■■■■ 4.2
SYMPK-208ENST00000598059 PEG3Q9GZU2 1588 aa41.08■■■■■ 4.17
SYMPK-208ENST00000598059 BAZ1BQ9UIG0 1483 aaKnown RBP41.06■■■■■ 4.16
SYMPK-208ENST00000598059 MROH2BQ7Z745 1585 aa41■■■■■ 4.15
SYMPK-208ENST00000598059 ERCC6Q03468 1493 aa40.96■■■■■ 4.15
SYMPK-208ENST00000598059 NESP48681 1621 aa40.83■■■■■ 4.13
SYMPK-208ENST00000598059 CUX2O14529 1486 aa40.83■■■■■ 4.13
SYMPK-208ENST00000598059 DNAJC5Q9H3Z4 198 aa40.6■■■■■ 4.09
SYMPK-208ENST00000598059 LAMC3Q9Y6N6 1575 aa40.59■■■■■ 4.09
SYMPK-208ENST00000598059 WIZO95785 1651 aa40.52■■■■■ 4.08
SYMPK-208ENST00000598059 THOC2Q8NI27 1593 aaKnown RBP40.38■■■■■ 4.05
SYMPK-208ENST00000598059 PDS5BQ9NTI5 1447 aa40.34■■■■■ 4.05
SYMPK-208ENST00000598059 KIF21AQ7Z4S6 1674 aa40.32■■■■■ 4.05
SYMPK-208ENST00000598059 CADPSQ9ULU8 1353 aa40.3■■■■■ 4.04
SYMPK-208ENST00000598059 RSF1Q96T23 1441 aaPredicted RBP40.23■■■■■ 4.03
SYMPK-208ENST00000598059 TOP2AP11388 1531 aaKnown RBP40.01■■■■■ 4
SYMPK-208ENST00000598059 MRC2Q9UBG0 1479 aa39.97■■■■□ 3.99
SYMPK-208ENST00000598059 CFTRP13569 1480 aa39.89■■■■□ 3.98
SYMPK-208ENST00000598059 WDR62O43379 1518 aa39.88■■■■□ 3.97
SYMPK-208ENST00000598059 CEP164Q9UPV0 1460 aa39.86■■■■□ 3.97
SYMPK-208ENST00000598059 FANCD2Q9BXW9 1451 aa39.84■■■■□ 3.97
SYMPK-208ENST00000598059 CCDC88BA6NC98 1476 aa39.56■■■■□ 3.92
SYMPK-208ENST00000598059 PRDM2Q13029 1718 aa39.51■■■■□ 3.92
SYMPK-208ENST00000598059 URB2Q14146 1524 aaKnown RBP39.5■■■■□ 3.91
SYMPK-208ENST00000598059 TOPBP1Q92547 1522 aa39.11■■■■□ 3.85
SYMPK-208ENST00000598059 IFT140Q96RY7 1462 aa39.05■■■■□ 3.84
SYMPK-208ENST00000598059 ABCC8Q09428 1581 aa39.04■■■■□ 3.84
SYMPK-208ENST00000598059 OSCARQ8IYS5 282 aa39.01■■■■□ 3.84
SYMPK-208ENST00000598059 ZNF608Q9ULD9 1512 aaPredicted RBP38.99■■■■□ 3.83
SYMPK-208ENST00000598059 DNMBPQ6XZF7 1577 aa38.98■■■■□ 3.83
SYMPK-208ENST00000598059 TRIM41Q8WV44 630 aa38.87■■■■□ 3.81
SYMPK-208ENST00000598059 EIF4G3O43432 1585 aaKnown RBP38.78■■■■□ 3.8
SYMPK-208ENST00000598059 TARBP1Q13395 1621 aaKnown RBP38.76■■■■□ 3.8
SYMPK-208ENST00000598059 POLA1P09884 1462 aaPredicted RBP38.73■■■■□ 3.79
SYMPK-208ENST00000598059 AQRO60306 1485 aaKnown RBP eCLIP38.66■■■■□ 3.788e-9■■■■■ 48.3
SYMPK-208ENST00000598059 SUPT5HO00267 1087 aaKnown RBP38.57■■■■□ 3.76
SYMPK-208ENST00000598059 RAD54L2Q9Y4B4 1467 aa38.57■■■■□ 3.76
SYMPK-208ENST00000598059 SOGA1O94964 1423 aa38.55■■■■□ 3.76
SYMPK-208ENST00000598059 CUX1P39880 1505 aa38.51■■■■□ 3.76
SYMPK-208ENST00000598059 FGD5Q6ZNL6 1462 aa38.5■■■■□ 3.75
SYMPK-208ENST00000598059 RIMBP3CA6NJZ7 1639 aa38.47■■■■□ 3.75
SYMPK-208ENST00000598059 RIMBP3BA6NNM3 1639 aa38.47■■■■□ 3.75
SYMPK-208ENST00000598059 RIMBP3Q9UFD9 1639 aa38.47■■■■□ 3.75
SYMPK-208ENST00000598059 CHD1O14646 1710 aa38.46■■■■□ 3.75
SYMPK-208ENST00000598059 TDRD9Q8NDG6 1382 aaKnown RBP38.44■■■■□ 3.74
SYMPK-208ENST00000598059 WDR97A6NE52 1622 aa38.38■■■■□ 3.73
SYMPK-208ENST00000598059 ARHGEF11O15085 1522 aa38.38■■■■□ 3.73
SYMPK-208ENST00000598059 FBLN2P98095 1184 aa38.35■■■■□ 3.73
SYMPK-208ENST00000598059 SNAPC4Q5SXM2 1469 aa38.26■■■■□ 3.72
SYMPK-208ENST00000598059 GRIN2BQ13224 1484 aa38.19■■■■□ 3.7
SYMPK-208ENST00000598059 MAGI1Q96QZ7 1491 aaPredicted RBP38.17■■■■□ 3.7
SYMPK-208ENST00000598059 CHMP7Q8WUX9 453 aaPredicted RBP38.11■■■■□ 3.69
SYMPK-208ENST00000598059 GAPVD1Q14C86 1478 aa38.09■■■■□ 3.69
SYMPK-208ENST00000598059 ABCA10Q8WWZ4 1543 aa38.08■■■■□ 3.69
SYMPK-208ENST00000598059 CYB5RLQ6IPT4 315 aa38.08■■■■□ 3.69
SYMPK-208ENST00000598059 PBRM1Q86U86 1689 aa38.06■■■■□ 3.68
SYMPK-208ENST00000598059 SYNJ2O15056 1496 aa38.04■■■■□ 3.68
SYMPK-208ENST00000598059 CLASP1Q7Z460 1538 aa38.02■■■■□ 3.68
SYMPK-208ENST00000598059 ABCA5Q8WWZ7 1642 aa38.01■■■■□ 3.68
SYMPK-208ENST00000598059 ARAP1Q96P48 1450 aa38.01■■■■□ 3.67
SYMPK-208ENST00000598059 SYNJ1O43426 1573 aa38.01■■■■□ 3.67
SYMPK-208ENST00000598059 WRNQ14191 1432 aaPredicted RBP eCLIP37.97■■■■□ 3.67
SYMPK-208ENST00000598059 TOP2BQ02880 1626 aa37.95■■■■□ 3.67
SYMPK-208ENST00000598059 BIVM-ERCC5R4GMW8 1640 aa37.94■■■■□ 3.66
SYMPK-208ENST00000598059 ADAMTS12P58397 1594 aa37.71■■■■□ 3.63
SYMPK-208ENST00000598059 GRIN2AQ12879 1464 aa37.71■■■■□ 3.63
SYMPK-208ENST00000598059 ERICH3Q5RHP9 1530 aa37.61■■■■□ 3.61
SYMPK-208ENST00000598059 FHAD1B1AJZ9 1412 aa37.61■■■■□ 3.61
SYMPK-208ENST00000598059 TRHP20396 242 aaPredicted RBP37.57■■■■□ 3.6
SYMPK-208ENST00000598059 NUP160Q12769 1436 aa37.57■■■■□ 3.6
SYMPK-208ENST00000598059 CEP170Q5SW79 1584 aa37.56■■■■□ 3.6
SYMPK-208ENST00000598059 ERCC6L2Q5T890 1561 aa37.44■■■■□ 3.58
SYMPK-208ENST00000598059 SHROOM2Q13796 1616 aa37.39■■■■□ 3.58
SYMPK-208ENST00000598059 KIF27Q86VH2 1401 aa37.21■■■■□ 3.55
SYMPK-208ENST00000598059 JPH4Q96JJ6 628 aa37.19■■■■□ 3.54
SYMPK-208ENST00000598059 PRG4Q92954 1404 aaPredicted RBP37.19■■■■□ 3.54
SYMPK-208ENST00000598059 IGF1RP08069 1367 aa37.18■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms