RNA–Protein interactions for RNA: ENST00000641446.1

MTHFR-212, Transcript of methylenetetrahydrofolate reductase, humanhuman

Gene MTHFR, Length 2,820 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFR-212ENST00000641446 NISCHQ9Y2I1 1504 aa26.62■■□□□ 1.85
MTHFR-212ENST00000641446 SHROOM4Q9ULL8 1493 aa23.42■■□□□ 1.34
MTHFR-212ENST00000641446 SUPT5HO00267 1087 aaKnown RBP23.17■■□□□ 1.3
MTHFR-212ENST00000641446 HRCP23327 699 aa22.76■■□□□ 1.23
MTHFR-212ENST00000641446 MYO15BQ96JP2 1530 aa22.7■■□□□ 1.23
MTHFR-212ENST00000641446 CHIC1Q5VXU3 224 aa22.62■■□□□ 1.21
MTHFR-212ENST00000641446 ZCCHC6Q5VYS8 1495 aaKnown RBP22.59■■□□□ 1.21
MTHFR-212ENST00000641446 PCGF6Q9BYE7 350 aa22.53■■□□□ 1.2
MTHFR-212ENST00000641446 PPARGC1BQ86YN6 1023 aaKnown RBP22.39■■□□□ 1.18
MTHFR-212ENST00000641446 DCAF8L2P0C7V8 631 aa22.31■■□□□ 1.16
MTHFR-212ENST00000641446 CCDC180Q9P1Z9 1646 aa22.24■■□□□ 1.15
MTHFR-212ENST00000641446 LOC105371045A0A1W2PR82 267 aa22.1■■□□□ 1.13
MTHFR-212ENST00000641446 DCAF1Q9Y4B6 1507 aa22.05■■□□□ 1.12
MTHFR-212ENST00000641446 TRIM26Q12899 539 aaPredicted RBP21.84■■□□□ 1.09
MTHFR-212ENST00000641446 ZEB1P37275 1124 aaPredicted RBP21.5■■□□□ 1.03
MTHFR-212ENST00000641446 FAM9AQ8IZU1 332 aaPredicted RBP21.45■■□□□ 1.02
MTHFR-212ENST00000641446 TRIM41Q8WV44 630 aa21.42■■□□□ 1.02
MTHFR-212ENST00000641446 ABCC9O60706 1549 aa21.42■■□□□ 1.02
MTHFR-212ENST00000641446 EHMT2Q96KQ7 1210 aa21.4■■□□□ 1.02
MTHFR-212ENST00000641446 SCAF1Q9H7N4 1312 aaKnown RBP21.36■■□□□ 1.01
MTHFR-212ENST00000641446 RSF1Q96T23 1441 aaPredicted RBP21.32■■□□□ 1
MTHFR-212ENST00000641446 PELP1Q8IZL8 1130 aaKnown RBP21.31■■□□□ 1
MTHFR-212ENST00000641446 RB1CC1Q8TDY2 1594 aa21.22■□□□□ 0.99
MTHFR-212ENST00000641446 SCRIBQ14160 1630 aa21.22■□□□□ 0.99
MTHFR-212ENST00000641446 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.02■□□□□ 0.96
MTHFR-212ENST00000641446 CCER1Q8TC90 406 aaPredicted RBP20.95■□□□□ 0.94
MTHFR-212ENST00000641446 ACIN1Q9UKV3 1341 aaKnown RBP20.92■□□□□ 0.94
MTHFR-212ENST00000641446 NEUROD1Q13562 356 aa20.91■□□□□ 0.94
MTHFR-212ENST00000641446 CECR2Q9BXF3 1484 aa20.87■□□□□ 0.93
MTHFR-212ENST00000641446 TTBK1Q5TCY1 1321 aaPredicted RBP20.82■□□□□ 0.92
MTHFR-212ENST00000641446 MROH2BQ7Z745 1585 aa20.81■□□□□ 0.92
MTHFR-212ENST00000641446 DIEXFQ68CQ4 756 aaKnown RBP20.78■□□□□ 0.92
MTHFR-212ENST00000641446 GTF3C3Q9Y5Q9 886 aa20.76■□□□□ 0.91
MTHFR-212ENST00000641446 WIZO95785 1651 aa20.73■□□□□ 0.91
MTHFR-212ENST00000641446 CENPBP07199 599 aaPredicted RBP20.7■□□□□ 0.9
MTHFR-212ENST00000641446 EIF4G1Q04637 1599 aaKnown RBP20.54■□□□□ 0.88
MTHFR-212ENST00000641446 BAZ1AQ9NRL2 1556 aaPredicted RBP20.53■□□□□ 0.88
MTHFR-212ENST00000641446 CEP162Q5TB80 1403 aa20.51■□□□□ 0.87
MTHFR-212ENST00000641446 ABCC8Q09428 1581 aa20.51■□□□□ 0.87
MTHFR-212ENST00000641446 NACADO15069 1562 aa20.51■□□□□ 0.87
MTHFR-212ENST00000641446 WRNQ14191 1432 aaPredicted RBP eCLIP20.5■□□□□ 0.87
MTHFR-212ENST00000641446 CCDC88BA6NC98 1476 aa20.5■□□□□ 0.87
MTHFR-212ENST00000641446 YTHDC1Q96MU7 727 aaKnown RBP20.49■□□□□ 0.87
MTHFR-212ENST00000641446 ZNF316A6NFI3 1004 aaPredicted RBP20.45■□□□□ 0.86
MTHFR-212ENST00000641446 SOGA1O94964 1423 aa20.42■□□□□ 0.86
MTHFR-212ENST00000641446 UBTFP17480 764 aaKnown RBP20.39■□□□□ 0.85
MTHFR-212ENST00000641446 TNIKQ9UKE5 1360 aa20.37■□□□□ 0.85
MTHFR-212ENST00000641446 MYT1Q01538 1121 aa20.32■□□□□ 0.84
MTHFR-212ENST00000641446 RUSC2Q8N2Y8 1516 aa20.31■□□□□ 0.84
MTHFR-212ENST00000641446 MIER1Q8N108 512 aa20.31■□□□□ 0.84
MTHFR-212ENST00000641446 CSRNP3Q8WYN3 585 aa20.31■□□□□ 0.84
MTHFR-212ENST00000641446 TOP2AP11388 1531 aaKnown RBP20.3■□□□□ 0.84
MTHFR-212ENST00000641446 HNRNPUL2Q1KMD3 747 aaKnown RBP20.29■□□□□ 0.84
MTHFR-212ENST00000641446 SMARCA2P51531 1590 aa20.24■□□□□ 0.83
MTHFR-212ENST00000641446 EEA1Q15075 1411 aa20.18■□□□□ 0.82
MTHFR-212ENST00000641446 GOLGA3Q08378 1498 aa20.18■□□□□ 0.82
MTHFR-212ENST00000641446 SMARCA4P51532 1647 aa20.17■□□□□ 0.82
MTHFR-212ENST00000641446 RANGAP1P46060 587 aaPredicted RBP20.04■□□□□ 0.8
MTHFR-212ENST00000641446 CLIP1P30622 1438 aa20.03■□□□□ 0.8
MTHFR-212ENST00000641446 CEP164Q9UPV0 1460 aa19.99■□□□□ 0.79
MTHFR-212ENST00000641446 APLP2Q06481 763 aa19.99■□□□□ 0.79
MTHFR-212ENST00000641446 VPS8Q8N3P4 1428 aa19.95■□□□□ 0.78
MTHFR-212ENST00000641446 SYNJ1O43426 1573 aa19.91■□□□□ 0.78
MTHFR-212ENST00000641446 KIF21BO75037 1637 aa19.91■□□□□ 0.78
MTHFR-212ENST00000641446 RAPGEF2Q9Y4G8 1499 aa19.87■□□□□ 0.77
MTHFR-212ENST00000641446 UNC13AQ9UPW8 1703 aa19.86■□□□□ 0.77
MTHFR-212ENST00000641446 PABPN1Q86U42 306 aaKnown RBP eCLIP19.85■□□□□ 0.77
MTHFR-212ENST00000641446 SUPT16HQ9Y5B9 1047 aaKnown RBP19.84■□□□□ 0.77
MTHFR-212ENST00000641446 DHX57Q6P158 1386 aaKnown RBP19.8■□□□□ 0.76
MTHFR-212ENST00000641446 BAZ1BQ9UIG0 1483 aaKnown RBP19.78■□□□□ 0.76
MTHFR-212ENST00000641446 CLSPNQ9HAW4 1339 aa19.72■□□□□ 0.75
MTHFR-212ENST00000641446 KANK4Q5T7N3 995 aaPredicted RBP19.7■□□□□ 0.74
MTHFR-212ENST00000641446 TSHZ2Q9NRE2 1034 aa19.66■□□□□ 0.74
MTHFR-212ENST00000641446 PEG3Q9GZU2 1588 aa19.63■□□□□ 0.73
MTHFR-212ENST00000641446 ARAP1Q96P48 1450 aa19.62■□□□□ 0.73
MTHFR-212ENST00000641446 ITGAEP38570 1179 aa19.61■□□□□ 0.73
MTHFR-212ENST00000641446 KCNH8Q96L42 1107 aa19.61■□□□□ 0.73
MTHFR-212ENST00000641446 BICRAQ9NZM4 1560 aa19.61■□□□□ 0.73
MTHFR-212ENST00000641446 ATAD2BQ9ULI0 1458 aa19.57■□□□□ 0.72
MTHFR-212ENST00000641446 BCANQ96GW7 911 aa19.56■□□□□ 0.72
MTHFR-212ENST00000641446 TOP2BQ02880 1626 aa19.53■□□□□ 0.72
MTHFR-212ENST00000641446 RRBP1Q9P2E9 1410 aaKnown RBP19.52■□□□□ 0.72
MTHFR-212ENST00000641446 PRXQ9BXM0 1461 aa19.51■□□□□ 0.71
MTHFR-212ENST00000641446 CCNB3Q8WWL7 1395 aa19.49■□□□□ 0.71
MTHFR-212ENST00000641446 ANP32EQ9BTT0 268 aa19.49■□□□□ 0.71
MTHFR-212ENST00000641446 ERICH3Q5RHP9 1530 aa19.49■□□□□ 0.71
MTHFR-212ENST00000641446 CUX2O14529 1486 aa19.44■□□□□ 0.7
MTHFR-212ENST00000641446 FKBP8Q14318 412 aa19.43■□□□□ 0.7
MTHFR-212ENST00000641446 RAB3GAP2Q9H2M9 1393 aa19.42■□□□□ 0.7
MTHFR-212ENST00000641446 BIVM-ERCC5R4GMW8 1640 aa19.41■□□□□ 0.7
MTHFR-212ENST00000641446 DDX10Q13206 875 aaKnown RBP19.41■□□□□ 0.7
MTHFR-212ENST00000641446 MAPKBP1O60336 1514 aa19.38■□□□□ 0.69
MTHFR-212ENST00000641446 ARHGAP35Q9NRY4 1499 aa19.37■□□□□ 0.69
MTHFR-212ENST00000641446 SIN3AQ96ST3 1273 aa19.34■□□□□ 0.69
MTHFR-212ENST00000641446 KIF27Q86VH2 1401 aa19.33■□□□□ 0.69
MTHFR-212ENST00000641446 CUX1P39880 1505 aa19.32■□□□□ 0.68
MTHFR-212ENST00000641446 HIRIP3Q9BW71 556 aaPredicted RBP19.32■□□□□ 0.68
MTHFR-212ENST00000641446 WDR97A6NE52 1622 aa19.3■□□□□ 0.68
MTHFR-212ENST00000641446 SETD5Q9C0A6 1442 aa19.27■□□□□ 0.68
MTHFR-212ENST00000641446 TRIM52Q96A61 297 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms