Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 ZCCHC2-206ENST00000588676 1877 nt29.41■■■□□ 2.33e-12■□□□□ 8.5
XRN2Q9H0D6 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.28■■□□□ 1.323e-12■□□□□ 8.5
XRN2Q9H0D6 ATXN2L-222ENST00000567024 525 ntTSL 320.44■□□□□ 0.866e-46■□□□□ 8.5
XRN2Q9H0D6 ZCCHC2-202ENST00000585873 5652 ntTSL 1 (best)19.62■□□□□ 0.733e-12■□□□□ 8.5
XRN2Q9H0D6 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC25.15■■□□□ 1.621e-6■□□□□ 8.5
XRN2Q9H0D6 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.49■□□□□ 0.871e-6■□□□□ 8.5
XRN2Q9H0D6 HNF4A-203ENST00000372920 3340 ntTSL 1 (best)17.54■□□□□ 0.41e-6■□□□□ 8.5
XRN2Q9H0D6 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.4■□□□□ 0.381e-6■□□□□ 8.5
XRN2Q9H0D6 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC15.48■□□□□ 0.071e-6■□□□□ 8.5
XRN2Q9H0D6 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC14.12□□□□□ -0.151e-6■□□□□ 8.5
XRN2Q9H0D6 HNF4A-209ENST00000619550 4763 ntTSL 5 BASIC11.03□□□□□ -0.641e-6■□□□□ 8.5
XRN2Q9H0D6 HNF4A-201ENST00000316099 6445 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.691e-6■□□□□ 8.5
XRN2Q9H0D6 HP1BP3-211ENST00000443615 557 ntTSL 324.12■■□□□ 1.452e-18■□□□□ 8.5
XRN2Q9H0D6 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC23.69■■□□□ 1.382e-18■□□□□ 8.5
XRN2Q9H0D6 HP1BP3-206ENST00000419490 538 ntTSL 422.31■■□□□ 1.162e-18■□□□□ 8.5
XRN2Q9H0D6 HP1BP3-204ENST00000414993 727 ntTSL 419.39■□□□□ 0.692e-18■□□□□ 8.5
XRN2Q9H0D6 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.212e-18■□□□□ 8.5
XRN2Q9H0D6 ATG4B-217ENST00000475693 2237 ntTSL 219.81■□□□□ 0.763e-6■□□□□ 8.5
XRN2Q9H0D6 PARP6-215ENST00000567633 405 ntTSL 327.41■■□□□ 1.983e-10■□□□□ 8.5
XRN2Q9H0D6 PARP6-210ENST00000566844 829 ntTSL 223.75■■□□□ 1.393e-10■□□□□ 8.5
XRN2Q9H0D6 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.353e-10■□□□□ 8.5
XRN2Q9H0D6 PARP6-218ENST00000568360 596 ntTSL 512.64□□□□□ -0.393e-10■□□□□ 8.5
XRN2Q9H0D6 CLASRP-205ENST00000585432 290 ntTSL 220.06■□□□□ 0.86e-7■□□□□ 8.5
XRN2Q9H0D6 LTBP4-232ENST00000610893 578 ntTSL 423.92■■□□□ 1.424e-7■□□□□ 8.5
XRN2Q9H0D6 LTBP4-206ENST00000546155 1285 ntTSL 223.75■■□□□ 1.394e-7■□□□□ 8.5
XRN2Q9H0D6 LTBP4-239ENST00000622565 756 ntTSL 423.12■■□□□ 1.294e-7■□□□□ 8.5
XRN2Q9H0D6 LTBP4-231ENST00000602251 671 ntTSL 223.06■■□□□ 1.284e-7■□□□□ 8.5
XRN2Q9H0D6 ZNF692-229ENST00000534456 587 ntTSL 423.02■■□□□ 1.284e-7■□□□□ 8.5
XRN2Q9H0D6 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.714e-7■□□□□ 8.5
XRN2Q9H0D6 LTBP4-233ENST00000612121 755 ntTSL 319.41■□□□□ 0.74e-7■□□□□ 8.5
XRN2Q9H0D6 LTBP4-226ENST00000599724 910 ntTSL 518.78■□□□□ 0.64e-7■□□□□ 8.5
XRN2Q9H0D6 TPI1-206ENST00000488464 791 ntTSL 5 BASIC18.27■□□□□ 0.524e-7■□□□□ 8.5
XRN2Q9H0D6 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.464e-7■□□□□ 8.5
XRN2Q9H0D6 LTBP4-234ENST00000612845 527 ntTSL 417.69■□□□□ 0.424e-7■□□□□ 8.5
XRN2Q9H0D6 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.44e-7■□□□□ 8.5
XRN2Q9H0D6 LTBP4-212ENST00000595118 2446 ntTSL 217.48■□□□□ 0.394e-7■□□□□ 8.5
XRN2Q9H0D6 LTBP4-229ENST00000601032 2019 ntTSL 1 (best)17.08■□□□□ 0.334e-7■□□□□ 8.5
XRN2Q9H0D6 LTBP4-228ENST00000600499 580 ntTSL 216.82■□□□□ 0.284e-7■□□□□ 8.5
XRN2Q9H0D6 LTBP4-216ENST00000597071 670 ntTSL 215.61■□□□□ 0.094e-7■□□□□ 8.5
XRN2Q9H0D6 LTBP4-202ENST00000243562 3140 ntTSL 213.88□□□□□ -0.194e-7■□□□□ 8.5
XRN2Q9H0D6 SORBS3-215ENST00000522721 601 ntTSL 427.66■■■□□ 2.029e-9■□□□□ 8.4
XRN2Q9H0D6 SORBS3-218ENST00000523740 983 ntTSL 325.78■■□□□ 1.729e-9■□□□□ 8.4
XRN2Q9H0D6 SORBS3-202ENST00000517500 1228 ntTSL 225.08■■□□□ 1.619e-9■□□□□ 8.4
XRN2Q9H0D6 SORBS3-212ENST00000521787 561 ntTSL 423.09■■□□□ 1.299e-9■□□□□ 8.4
XRN2Q9H0D6 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.9■■□□□ 1.18e-7■□□□□ 8.4
XRN2Q9H0D6 SORBS3-214ENST00000522315 563 ntTSL 421.81■■□□□ 1.089e-9■□□□□ 8.4
XRN2Q9H0D6 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.36■□□□□ 0.859e-9■□□□□ 8.4
XRN2Q9H0D6 SORBS3-203ENST00000517535 3067 ntTSL 219.54■□□□□ 0.729e-9■□□□□ 8.4
XRN2Q9H0D6 SORBS3-211ENST00000521554 858 ntTSL 219.52■□□□□ 0.729e-9■□□□□ 8.4
XRN2Q9H0D6 SORBS3-207ENST00000519453 560 ntTSL 418.88■□□□□ 0.619e-9■□□□□ 8.4
XRN2Q9H0D6 SORBS3-219ENST00000523900 670 ntTSL 317.71■□□□□ 0.439e-9■□□□□ 8.4
XRN2Q9H0D6 PCSK6-204ENST00000558154 852 ntTSL 215.59■□□□□ 0.098e-7■□□□□ 8.4
XRN2Q9H0D6 PCSK6-219ENST00000621185 462 ntTSL 215.25■□□□□ 0.038e-7■□□□□ 8.4
XRN2Q9H0D6 FASTK-208ENST00000467237 3011 ntTSL 1 (best)14.86□□□□□ -0.039e-9■□□□□ 8.4
XRN2Q9H0D6 RAB17-210ENST00000477149 3211 ntTSL 1 (best)12.67□□□□□ -0.382e-11■□□□□ 8.4
XRN2Q9H0D6 SORBS3-201ENST00000240123 3459 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.619e-9■□□□□ 8.4
XRN2Q9H0D6 PCSK6-211ENST00000559605 379 ntTSL 310.07□□□□□ -0.88e-7■□□□□ 8.4
XRN2Q9H0D6 PCSK6-213ENST00000560902 501 ntTSL 49.42□□□□□ -0.98e-7■□□□□ 8.4
XRN2Q9H0D6 HSP90AA1-204ENST00000554401 1710 ntTSL 1 (best)9.9□□□□□ -0.832e-7■□□□□ 8.4
XRN2Q9H0D6 HSP90AA1-205ENST00000555662 429 ntTSL 26.9□□□□□ -1.32e-7■□□□□ 8.4
XRN2Q9H0D6 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.845e-6■□□□□ 8.4
XRN2Q9H0D6 PSMG4-201ENST00000324987 778 ntTSL 332.29■■■□□ 2.766e-10■□□□□ 8.4
XRN2Q9H0D6 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC32.29■■■□□ 2.766e-10■□□□□ 8.4
XRN2Q9H0D6 UBAP2L-209ENST00000437652 911 ntTSL 331.54■■■□□ 2.645e-6■□□□□ 8.4
XRN2Q9H0D6 UBAP2L-205ENST00000412596 980 ntTSL 531.44■■■□□ 2.625e-6■□□□□ 8.4
XRN2Q9H0D6 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC30.99■■■□□ 2.556e-10■□□□□ 8.4
XRN2Q9H0D6 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC29.03■■■□□ 2.246e-10■□□□□ 8.4
XRN2Q9H0D6 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC28.58■■■□□ 2.176e-10■□□□□ 8.4
XRN2Q9H0D6 SPON2-218ENST00000512888 851 ntTSL 228.37■■■□□ 2.135e-6■□□□□ 8.4
XRN2Q9H0D6 SPON2-211ENST00000507466 525 ntTSL 227.48■■□□□ 1.995e-6■□□□□ 8.4
XRN2Q9H0D6 PDLIM7-206ENST00000463411 1015 ntTSL 226.64■■□□□ 1.865e-6■□□□□ 8.4
XRN2Q9H0D6 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.96■■□□□ 1.756e-10■□□□□ 8.4
XRN2Q9H0D6 GPS1-222ENST00000583983 556 ntTSL 525.68■■□□□ 1.75e-6■□□□□ 8.4
XRN2Q9H0D6 SHF-207ENST00000560540 2062 ntTSL 5 BASIC24.93■■□□□ 1.586e-10■□□□□ 8.4
XRN2Q9H0D6 FBXO2-202ENST00000465901 434 ntTSL 324.75■■□□□ 1.555e-6■□□□□ 8.4
XRN2Q9H0D6 SH3YL1-221ENST00000477707 581 ntTSL 424.71■■□□□ 1.555e-6■□□□□ 8.4
XRN2Q9H0D6 SPON2-208ENST00000504909 551 ntTSL 424.32■■□□□ 1.485e-6■□□□□ 8.4
XRN2Q9H0D6 PDPK1-216ENST00000569721 330 ntTSL 524.18■■□□□ 1.465e-6■□□□□ 8.4
XRN2Q9H0D6 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC24.1■■□□□ 1.455e-6■□□□□ 8.4
XRN2Q9H0D6 RPLP0-222ENST00000551336 406 ntTSL 323.96■■□□□ 1.435e-6■□□□□ 8.4
XRN2Q9H0D6 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.425e-6■□□□□ 8.4
XRN2Q9H0D6 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC23.87■■□□□ 1.415e-6■□□□□ 8.4
XRN2Q9H0D6 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.355e-6■□□□□ 8.4
XRN2Q9H0D6 RPLP0-223ENST00000551783 676 ntTSL 223.31■■□□□ 1.325e-6■□□□□ 8.4
XRN2Q9H0D6 ABCA5-207ENST00000588665 560 ntTSL 523.3■■□□□ 1.325e-6■□□□□ 8.4
XRN2Q9H0D6 WDR74-212ENST00000541930 827 ntTSL 522.16■■□□□ 1.145e-6■□□□□ 8.4
XRN2Q9H0D6 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.995e-6■□□□□ 8.4
XRN2Q9H0D6 OPLAH-203ENST00000567871 792 ntTSL 521.17■□□□□ 0.985e-6■□□□□ 8.4
XRN2Q9H0D6 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.965e-6■□□□□ 8.4
XRN2Q9H0D6 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.955e-6■□□□□ 8.4
XRN2Q9H0D6 UBAP2L-210ENST00000441890 678 ntTSL 220.65■□□□□ 0.95e-6■□□□□ 8.4
XRN2Q9H0D6 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC20.53■□□□□ 0.885e-6■□□□□ 8.4
XRN2Q9H0D6 WDR74-213ENST00000542347 988 ntTSL 220.42■□□□□ 0.865e-6■□□□□ 8.4
XRN2Q9H0D6 UNK-206ENST00000589790 549 ntTSL 320.19■□□□□ 0.825e-6■□□□□ 8.4
XRN2Q9H0D6 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.825e-6■□□□□ 8.4
XRN2Q9H0D6 AP3D1-212ENST00000592488 707 ntTSL 320.06■□□□□ 0.85e-6■□□□□ 8.4
XRN2Q9H0D6 SH3YL1-213ENST00000463865 1999 ntTSL 519.94■□□□□ 0.785e-6■□□□□ 8.4
XRN2Q9H0D6 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.695e-6■□□□□ 8.4
XRN2Q9H0D6 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.696e-10■□□□□ 8.4
XRN2Q9H0D6 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.665e-6■□□□□ 8.4
Retrieved 100 of 21,068 protein–RNA pairs in 579.2 ms