RNA–Protein interactions for RNA: ENST00000219168.8

LYRM1-201, Transcript of LYR motif containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LYRM1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1-201ENST00000219168 NISCHQ9Y2I1 1504 aa50.68■■■■■ 5.7
LYRM1-201ENST00000219168 CCDC180Q9P1Z9 1646 aa44.08■■■■■ 4.65
LYRM1-201ENST00000219168 ZCCHC6Q5VYS8 1495 aaKnown RBP42.59■■■■■ 4.41
LYRM1-201ENST00000219168 DCAF8L2P0C7V8 631 aa41.97■■■■■ 4.31
LYRM1-201ENST00000219168 DCAF1Q9Y4B6 1507 aa41.86■■■■■ 4.29
LYRM1-201ENST00000219168 ABCC9O60706 1549 aa41.64■■■■■ 4.26
LYRM1-201ENST00000219168 SHROOM4Q9ULL8 1493 aa41.57■■■■■ 4.24
LYRM1-201ENST00000219168 MYO15BQ96JP2 1530 aa41.29■■■■■ 4.2
LYRM1-201ENST00000219168 NACADO15069 1562 aa41.05■■■■■ 4.16
LYRM1-201ENST00000219168 RB1CC1Q8TDY2 1594 aa40.68■■■■■ 4.1
LYRM1-201ENST00000219168 SCRIBQ14160 1630 aa40.64■■■■■ 4.1
LYRM1-201ENST00000219168 SUPT5HO00267 1087 aaKnown RBP40.09■■■■■ 4.01
LYRM1-201ENST00000219168 UNC13AQ9UPW8 1703 aa39.82■■■■□ 3.96
LYRM1-201ENST00000219168 BICRAQ9NZM4 1560 aa39.41■■■■□ 3.9
LYRM1-201ENST00000219168 RSF1Q96T23 1441 aaPredicted RBP39.39■■■■□ 3.9
LYRM1-201ENST00000219168 CECR2Q9BXF3 1484 aa39.38■■■■□ 3.9
LYRM1-201ENST00000219168 PABPN1Q86U42 306 aaKnown RBP eCLIP39.35■■■■□ 3.89
LYRM1-201ENST00000219168 MROH2BQ7Z745 1585 aa39.18■■■■□ 3.86
LYRM1-201ENST00000219168 BAZ1AQ9NRL2 1556 aaPredicted RBP39.12■■■■□ 3.85
LYRM1-201ENST00000219168 SMARCA4P51532 1647 aa38.92■■■■□ 3.82
LYRM1-201ENST00000219168 WIZO95785 1651 aa38.86■■■■□ 3.81
LYRM1-201ENST00000219168 TOP2AP11388 1531 aaKnown RBP38.46■■■■□ 3.75
LYRM1-201ENST00000219168 CHIC1Q5VXU3 224 aa38.41■■■■□ 3.74
LYRM1-201ENST00000219168 PEG3Q9GZU2 1588 aa38.39■■■■□ 3.74
LYRM1-201ENST00000219168 ATAD2BQ9ULI0 1458 aa38.25■■■■□ 3.71
LYRM1-201ENST00000219168 SMARCA2P51531 1590 aa38.24■■■■□ 3.71
LYRM1-201ENST00000219168 EIF4G1Q04637 1599 aaKnown RBP38.23■■■■□ 3.71
LYRM1-201ENST00000219168 CCDC88BA6NC98 1476 aa38.09■■■■□ 3.69
LYRM1-201ENST00000219168 BAZ1BQ9UIG0 1483 aaKnown RBP38.08■■■■□ 3.69
LYRM1-201ENST00000219168 NCAPD3P42695 1498 aa37.89■■■■□ 3.66
LYRM1-201ENST00000219168 HMGXB3Q12766 1538 aa37.83■■■■□ 3.65
LYRM1-201ENST00000219168 TRIM41Q8WV44 630 aa37.66■■■■□ 3.62
LYRM1-201ENST00000219168 CC2D2AQ9P2K1 1620 aa37.64■■■■□ 3.62
LYRM1-201ENST00000219168 ABCC8Q09428 1581 aa37.34■■■■□ 3.57
LYRM1-201ENST00000219168 WRNQ14191 1432 aaPredicted RBP eCLIP37.1■■■■□ 3.53
LYRM1-201ENST00000219168 CFTRP13569 1480 aa37.09■■■■□ 3.53
LYRM1-201ENST00000219168 FAM9AQ8IZU1 332 aaPredicted RBP37.03■■■■□ 3.52
LYRM1-201ENST00000219168 LOC105371045A0A1W2PR82 267 aa36.99■■■■□ 3.51
LYRM1-201ENST00000219168 CADPSQ9ULU8 1353 aa36.96■■■■□ 3.51
LYRM1-201ENST00000219168 SYNJ1O43426 1573 aa36.9■■■■□ 3.5
LYRM1-201ENST00000219168 PRDM2Q13029 1718 aa36.88■■■■□ 3.49
LYRM1-201ENST00000219168 TOP2BQ02880 1626 aa36.73■■■■□ 3.47
LYRM1-201ENST00000219168 BIVM-ERCC5R4GMW8 1640 aa36.68■■■■□ 3.46
LYRM1-201ENST00000219168 SOGA1O94964 1423 aa36.68■■■■□ 3.46
LYRM1-201ENST00000219168 DNAJC5BQ9UF47 199 aa36.67■■■■□ 3.46
LYRM1-201ENST00000219168 EEA1Q15075 1411 aa36.65■■■■□ 3.46
LYRM1-201ENST00000219168 CUX1P39880 1505 aa36.62■■■■□ 3.45
LYRM1-201ENST00000219168 NESP48681 1621 aa36.59■■■■□ 3.45
LYRM1-201ENST00000219168 LAMC3Q9Y6N6 1575 aa36.57■■■■□ 3.45
LYRM1-201ENST00000219168 FANCD2Q9BXW9 1451 aa36.56■■■■□ 3.44
LYRM1-201ENST00000219168 RUSC2Q8N2Y8 1516 aa36.53■■■■□ 3.44
LYRM1-201ENST00000219168 EHMT2Q96KQ7 1210 aa36.52■■■■□ 3.44
LYRM1-201ENST00000219168 CSRNP3Q8WYN3 585 aa36.48■■■■□ 3.43
LYRM1-201ENST00000219168 PDS5BQ9NTI5 1447 aa36.33■■■■□ 3.41
LYRM1-201ENST00000219168 CEP164Q9UPV0 1460 aa36.32■■■■□ 3.4
LYRM1-201ENST00000219168 DNMBPQ6XZF7 1577 aa36.24■■■■□ 3.39
LYRM1-201ENST00000219168 FGD5Q6ZNL6 1462 aa36.21■■■■□ 3.39
LYRM1-201ENST00000219168 TOPBP1Q92547 1522 aa36.17■■■■□ 3.38
LYRM1-201ENST00000219168 GOLGA3Q08378 1498 aa36.16■■■■□ 3.38
LYRM1-201ENST00000219168 KIF27Q86VH2 1401 aa36.16■■■■□ 3.38
LYRM1-201ENST00000219168 KIF21BO75037 1637 aa36.13■■■■□ 3.37
LYRM1-201ENST00000219168 KIF21AQ7Z4S6 1674 aa36.12■■■■□ 3.37
LYRM1-201ENST00000219168 URB2Q14146 1524 aaKnown RBP36.08■■■■□ 3.37
LYRM1-201ENST00000219168 UBTFP17480 764 aaKnown RBP36.08■■■■□ 3.37
LYRM1-201ENST00000219168 TNIKQ9UKE5 1360 aa36.07■■■■□ 3.37
LYRM1-201ENST00000219168 CUX2O14529 1486 aa36.03■■■■□ 3.36
LYRM1-201ENST00000219168 POLA1P09884 1462 aaPredicted RBP35.99■■■■□ 3.35
LYRM1-201ENST00000219168 RAPGEF2Q9Y4G8 1499 aa35.93■■■■□ 3.34
LYRM1-201ENST00000219168 RAD54L2Q9Y4B4 1467 aa35.91■■■■□ 3.34
LYRM1-201ENST00000219168 PRXQ9BXM0 1461 aa35.91■■■■□ 3.34
LYRM1-201ENST00000219168 CEP162Q5TB80 1403 aa35.89■■■■□ 3.34
LYRM1-201ENST00000219168 ABCA10Q8WWZ4 1543 aa35.87■■■■□ 3.33
LYRM1-201ENST00000219168 ERICH3Q5RHP9 1530 aa35.86■■■■□ 3.33
LYRM1-201ENST00000219168 MRC2Q9UBG0 1479 aa35.85■■■■□ 3.33
LYRM1-201ENST00000219168 IGF1RP08069 1367 aa35.8■■■■□ 3.32
LYRM1-201ENST00000219168 ERCC6Q03468 1493 aa35.72■■■■□ 3.31
LYRM1-201ENST00000219168 WDR97A6NE52 1622 aa35.7■■■■□ 3.31
LYRM1-201ENST00000219168 CARMIL1Q5VZK9 1371 aa35.66■■■■□ 3.3
LYRM1-201ENST00000219168 WDR62O43379 1518 aa35.61■■■■□ 3.29
LYRM1-201ENST00000219168 CLIP1P30622 1438 aa35.61■■■■□ 3.29
LYRM1-201ENST00000219168 TARBP1Q13395 1621 aaKnown RBP35.58■■■■□ 3.29
LYRM1-201ENST00000219168 TDRD9Q8NDG6 1382 aaKnown RBP35.57■■■■□ 3.28
LYRM1-201ENST00000219168 ABCA5Q8WWZ7 1642 aa35.55■■■■□ 3.28
LYRM1-201ENST00000219168 GAPVD1Q14C86 1478 aa35.52■■■■□ 3.28
LYRM1-201ENST00000219168 CUL7Q14999 1698 aa35.49■■■■□ 3.27
LYRM1-201ENST00000219168 RANGAP1P46060 587 aaPredicted RBP35.47■■■■□ 3.27
LYRM1-201ENST00000219168 PCGF6Q9BYE7 350 aa35.46■■■■□ 3.27
LYRM1-201ENST00000219168 THOC2Q8NI27 1593 aaKnown RBP35.45■■■■□ 3.27
LYRM1-201ENST00000219168 IFT140Q96RY7 1462 aa35.44■■■■□ 3.26
LYRM1-201ENST00000219168 TRIM26Q12899 539 aaPredicted RBP35.42■■■■□ 3.26
LYRM1-201ENST00000219168 AQRO60306 1485 aaKnown RBP eCLIP35.3■■■■□ 3.24
LYRM1-201ENST00000219168 VPS8Q8N3P4 1428 aa35.28■■■■□ 3.24
LYRM1-201ENST00000219168 PPARGC1BQ86YN6 1023 aaKnown RBP35.28■■■■□ 3.24
LYRM1-201ENST00000219168 PBRM1Q86U86 1689 aa35.27■■■■□ 3.24
LYRM1-201ENST00000219168 ZNF608Q9ULD9 1512 aaPredicted RBP35.23■■■■□ 3.23
LYRM1-201ENST00000219168 GRIN2BQ13224 1484 aa35.22■■■■□ 3.23
LYRM1-201ENST00000219168 ARAP1Q96P48 1450 aa35.2■■■■□ 3.23
LYRM1-201ENST00000219168 ARHGAP35Q9NRY4 1499 aa35.16■■■■□ 3.22
LYRM1-201ENST00000219168 FHAD1B1AJZ9 1412 aa35.14■■■■□ 3.22
LYRM1-201ENST00000219168 CTTNBP2Q8WZ74 1663 aa35.11■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms