RNA–Protein interactions for RNA: ENST00000562740.5

LYRM1-205, Transcript of LYR motif containing 1, humanhuman

TSL 1 (best) BASIC

Gene LYRM1, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1-205ENST00000562740 NISCHQ9Y2I1 1504 aa50.16■■■■■ 5.62
LYRM1-205ENST00000562740 CCDC180Q9P1Z9 1646 aa44.76■■■■■ 4.76
LYRM1-205ENST00000562740 ABCC9O60706 1549 aa43.78■■■■■ 4.6
LYRM1-205ENST00000562740 RB1CC1Q8TDY2 1594 aa42.13■■■■■ 4.33
LYRM1-205ENST00000562740 NACADO15069 1562 aa42.02■■■■■ 4.32
LYRM1-205ENST00000562740 DCAF8L2P0C7V8 631 aa41.86■■■■■ 4.29
LYRM1-205ENST00000562740 ZCCHC6Q5VYS8 1495 aaKnown RBP41.79■■■■■ 4.28
LYRM1-205ENST00000562740 MYO15BQ96JP2 1530 aa41.72■■■■■ 4.27
LYRM1-205ENST00000562740 DCAF1Q9Y4B6 1507 aa41.51■■■■■ 4.24
LYRM1-205ENST00000562740 UNC13AQ9UPW8 1703 aa41.24■■■■■ 4.19
LYRM1-205ENST00000562740 BICRAQ9NZM4 1560 aa40.83■■■■■ 4.13
LYRM1-205ENST00000562740 PABPN1Q86U42 306 aaKnown RBP eCLIP40.81■■■■■ 4.12
LYRM1-205ENST00000562740 SCRIBQ14160 1630 aa40.8■■■■■ 4.12
LYRM1-205ENST00000562740 SHROOM4Q9ULL8 1493 aa40.42■■■■■ 4.06
LYRM1-205ENST00000562740 DNAJC5BQ9UF47 199 aa40.15■■■■■ 4.02
LYRM1-205ENST00000562740 EIF4G1Q04637 1599 aaKnown RBP39.77■■■■□ 3.96
LYRM1-205ENST00000562740 CC2D2AQ9P2K1 1620 aa39.64■■■■□ 3.94
LYRM1-205ENST00000562740 CECR2Q9BXF3 1484 aa39.35■■■■□ 3.89
LYRM1-205ENST00000562740 SMARCA4P51532 1647 aa39■■■■□ 3.83
LYRM1-205ENST00000562740 BAZ1AQ9NRL2 1556 aaPredicted RBP38.93■■■■□ 3.82
LYRM1-205ENST00000562740 SMARCA2P51531 1590 aa38.74■■■■□ 3.79
LYRM1-205ENST00000562740 ATAD2BQ9ULI0 1458 aa38.73■■■■□ 3.79
LYRM1-205ENST00000562740 NCAPD3P42695 1498 aa38.72■■■■□ 3.79
LYRM1-205ENST00000562740 MROH2BQ7Z745 1585 aa38.65■■■■□ 3.78
LYRM1-205ENST00000562740 HMGXB3Q12766 1538 aa38.61■■■■□ 3.77
LYRM1-205ENST00000562740 PEG3Q9GZU2 1588 aa38.6■■■■□ 3.77
LYRM1-205ENST00000562740 BAZ1BQ9UIG0 1483 aaKnown RBP38.47■■■■□ 3.75
LYRM1-205ENST00000562740 WIZO95785 1651 aa38.29■■■■□ 3.72
LYRM1-205ENST00000562740 RSF1Q96T23 1441 aaPredicted RBP38.13■■■■□ 3.7
LYRM1-205ENST00000562740 TOP2AP11388 1531 aaKnown RBP37.87■■■■□ 3.65
LYRM1-205ENST00000562740 NESP48681 1621 aa37.86■■■■□ 3.65
LYRM1-205ENST00000562740 LAMC3Q9Y6N6 1575 aa37.8■■■■□ 3.64
LYRM1-205ENST00000562740 ERCC6Q03468 1493 aa37.77■■■■□ 3.64
LYRM1-205ENST00000562740 CADPSQ9ULU8 1353 aa37.56■■■■□ 3.6
LYRM1-205ENST00000562740 KIF21AQ7Z4S6 1674 aa37.51■■■■□ 3.6
LYRM1-205ENST00000562740 PDS5BQ9NTI5 1447 aa37.48■■■■□ 3.59
LYRM1-205ENST00000562740 CUX2O14529 1486 aa37.4■■■■□ 3.58
LYRM1-205ENST00000562740 THOC2Q8NI27 1593 aaKnown RBP37.38■■■■□ 3.58
LYRM1-205ENST00000562740 CCDC88BA6NC98 1476 aa37.35■■■■□ 3.57
LYRM1-205ENST00000562740 CFTRP13569 1480 aa37.35■■■■□ 3.57
LYRM1-205ENST00000562740 PRDM2Q13029 1718 aa37.25■■■■□ 3.55
LYRM1-205ENST00000562740 FANCD2Q9BXW9 1451 aa37.2■■■■□ 3.54
LYRM1-205ENST00000562740 CEP164Q9UPV0 1460 aa37.2■■■■□ 3.54
LYRM1-205ENST00000562740 MRC2Q9UBG0 1479 aa37.14■■■■□ 3.54
LYRM1-205ENST00000562740 SUPT5HO00267 1087 aaKnown RBP37.05■■■■□ 3.52
LYRM1-205ENST00000562740 WDR62O43379 1518 aa37.05■■■■□ 3.52
LYRM1-205ENST00000562740 URB2Q14146 1524 aaKnown RBP36.84■■■■□ 3.49
LYRM1-205ENST00000562740 TOPBP1Q92547 1522 aa36.59■■■■□ 3.45
LYRM1-205ENST00000562740 DNMBPQ6XZF7 1577 aa36.58■■■■□ 3.45
LYRM1-205ENST00000562740 ABCC8Q09428 1581 aa36.57■■■■□ 3.45
LYRM1-205ENST00000562740 IFT140Q96RY7 1462 aa36.38■■■■□ 3.41
LYRM1-205ENST00000562740 CUX1P39880 1505 aa36.29■■■■□ 3.4
LYRM1-205ENST00000562740 POLA1P09884 1462 aaPredicted RBP36.27■■■■□ 3.4
LYRM1-205ENST00000562740 DNAJC5Q9H3Z4 198 aa36.26■■■■□ 3.4
LYRM1-205ENST00000562740 TARBP1Q13395 1621 aaKnown RBP36.23■■■■□ 3.39
LYRM1-205ENST00000562740 ZNF608Q9ULD9 1512 aaPredicted RBP36.22■■■■□ 3.39
LYRM1-205ENST00000562740 FGD5Q6ZNL6 1462 aa36.18■■■■□ 3.38
LYRM1-205ENST00000562740 EIF4G3O43432 1585 aaKnown RBP36.17■■■■□ 3.38
LYRM1-205ENST00000562740 RAD54L2Q9Y4B4 1467 aa36.09■■■■□ 3.37
LYRM1-205ENST00000562740 SOGA1O94964 1423 aa36.08■■■■□ 3.37
LYRM1-205ENST00000562740 BIVM-ERCC5R4GMW8 1640 aa36.01■■■■□ 3.35
LYRM1-205ENST00000562740 WRNQ14191 1432 aaPredicted RBP eCLIP36■■■■□ 3.35
LYRM1-205ENST00000562740 WDR97A6NE52 1622 aa35.98■■■■□ 3.35
LYRM1-205ENST00000562740 TOP2BQ02880 1626 aa35.97■■■■□ 3.35
LYRM1-205ENST00000562740 AQRO60306 1485 aaKnown RBP eCLIP35.97■■■■□ 3.35
LYRM1-205ENST00000562740 SYNJ1O43426 1573 aa35.97■■■■□ 3.35
LYRM1-205ENST00000562740 TDRD9Q8NDG6 1382 aaKnown RBP35.88■■■■□ 3.33
LYRM1-205ENST00000562740 ABCA10Q8WWZ4 1543 aa35.81■■■■□ 3.32
LYRM1-205ENST00000562740 CHD1O14646 1710 aa35.76■■■■□ 3.31
LYRM1-205ENST00000562740 PBRM1Q86U86 1689 aa35.75■■■■□ 3.31
LYRM1-205ENST00000562740 ABCA5Q8WWZ7 1642 aa35.75■■■■□ 3.31
LYRM1-205ENST00000562740 OSCARQ8IYS5 282 aa35.73■■■■□ 3.31
LYRM1-205ENST00000562740 GRIN2BQ13224 1484 aa35.71■■■■□ 3.31
LYRM1-205ENST00000562740 SNAPC4Q5SXM2 1469 aa35.7■■■■□ 3.31
LYRM1-205ENST00000562740 GAPVD1Q14C86 1478 aa35.69■■■■□ 3.3
LYRM1-205ENST00000562740 MAGI1Q96QZ7 1491 aaPredicted RBP35.65■■■■□ 3.3
LYRM1-205ENST00000562740 FBLN2P98095 1184 aa35.54■■■■□ 3.28
LYRM1-205ENST00000562740 SYNJ2O15056 1496 aa35.5■■■■□ 3.27
LYRM1-205ENST00000562740 ADAMTS12P58397 1594 aa35.42■■■■□ 3.26
LYRM1-205ENST00000562740 CHMP7Q8WUX9 453 aaPredicted RBP35.42■■■■□ 3.26
LYRM1-205ENST00000562740 ERICH3Q5RHP9 1530 aa35.41■■■■□ 3.26
LYRM1-205ENST00000562740 RIMBP3CA6NJZ7 1639 aa35.32■■■■□ 3.24
LYRM1-205ENST00000562740 RIMBP3BA6NNM3 1639 aa35.32■■■■□ 3.24
LYRM1-205ENST00000562740 RIMBP3Q9UFD9 1639 aa35.32■■■■□ 3.24
LYRM1-205ENST00000562740 CLASP1Q7Z460 1538 aa35.31■■■■□ 3.24
LYRM1-205ENST00000562740 ARHGEF11O15085 1522 aa35.27■■■■□ 3.24
LYRM1-205ENST00000562740 FHAD1B1AJZ9 1412 aa35.27■■■■□ 3.24
LYRM1-205ENST00000562740 GRIN2AQ12879 1464 aa35.27■■■■□ 3.24
LYRM1-205ENST00000562740 KIF27Q86VH2 1401 aa35.24■■■■□ 3.23
LYRM1-205ENST00000562740 CUL7Q14999 1698 aa35.13■■■■□ 3.21
LYRM1-205ENST00000562740 CEP170Q5SW79 1584 aa35.13■■■■□ 3.21
LYRM1-205ENST00000562740 NUP160Q12769 1436 aa35.08■■■■□ 3.21
LYRM1-205ENST00000562740 TRIM41Q8WV44 630 aa35.08■■■■□ 3.21
LYRM1-205ENST00000562740 IGF1RP08069 1367 aa35.04■■■■□ 3.2
LYRM1-205ENST00000562740 ARAP1Q96P48 1450 aa34.97■■■■□ 3.19
LYRM1-205ENST00000562740 RUSC2Q8N2Y8 1516 aa34.91■■■■□ 3.18
LYRM1-205ENST00000562740 SHROOM2Q13796 1616 aa34.91■■■■□ 3.18
LYRM1-205ENST00000562740 CARMIL1Q5VZK9 1371 aa34.87■■■■□ 3.17
LYRM1-205ENST00000562740 CYB5RLQ6IPT4 315 aa34.84■■■■□ 3.17
LYRM1-205ENST00000562740 ERCC6L2Q5T890 1561 aa34.79■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms