RNA–Protein interactions for RNA: ENST00000521554.4

SORBS3-211, Transcript of sorbin and SH3 domain containing 3, humanhuman

TSL 2

Gene SORBS3, Length 858 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORBS3-211ENST00000521554 NISCHQ9Y2I1 1504 aa39.61■■■■□ 3.93
SORBS3-211ENST00000521554 ABCC9O60706 1549 aa36.52■■■■□ 3.44
SORBS3-211ENST00000521554 CCDC180Q9P1Z9 1646 aa35.83■■■■□ 3.33
SORBS3-211ENST00000521554 DNAJC5BQ9UF47 199 aa34.61■■■■□ 3.13
SORBS3-211ENST00000521554 RB1CC1Q8TDY2 1594 aa34.41■■■■□ 3.1
SORBS3-211ENST00000521554 NACADO15069 1562 aa33.97■■■■□ 3.03
SORBS3-211ENST00000521554 DCAF8L2P0C7V8 631 aa33.88■■■■□ 3.01
SORBS3-211ENST00000521554 PABPN1Q86U42 306 aaKnown RBP eCLIP33.88■■■■□ 3.019e-8■■■□□ 15.8
SORBS3-211ENST00000521554 UNC13AQ9UPW8 1703 aa33.67■■■□□ 2.98
SORBS3-211ENST00000521554 BICRAQ9NZM4 1560 aa33.38■■■□□ 2.93
SORBS3-211ENST00000521554 MYO15BQ96JP2 1530 aa33.18■■■□□ 2.9
SORBS3-211ENST00000521554 CECR2Q9BXF3 1484 aa32.9■■■□□ 2.86
SORBS3-211ENST00000521554 CC2D2AQ9P2K1 1620 aa32.9■■■□□ 2.86
SORBS3-211ENST00000521554 SHROOM4Q9ULL8 1493 aa32.8■■■□□ 2.84
SORBS3-211ENST00000521554 SCRIBQ14160 1630 aa32.78■■■□□ 2.84
SORBS3-211ENST00000521554 ZCCHC6Q5VYS8 1495 aaKnown RBP32.73■■■□□ 2.83
SORBS3-211ENST00000521554 EIF4G1Q04637 1599 aaKnown RBP32.66■■■□□ 2.82
SORBS3-211ENST00000521554 DCAF1Q9Y4B6 1507 aa32.57■■■□□ 2.8
SORBS3-211ENST00000521554 DNAJC5Q9H3Z4 198 aa32.16■■■□□ 2.74
SORBS3-211ENST00000521554 ERCC6Q03468 1493 aa31.61■■■□□ 2.65
SORBS3-211ENST00000521554 CUX2O14529 1486 aa31.59■■■□□ 2.65
SORBS3-211ENST00000521554 NCAPD3P42695 1498 aa31.3■■■□□ 2.6
SORBS3-211ENST00000521554 ATAD2BQ9ULI0 1458 aa31.21■■■□□ 2.59
SORBS3-211ENST00000521554 NESP48681 1621 aa31.17■■■□□ 2.58
SORBS3-211ENST00000521554 SMARCA2P51531 1590 aa31.12■■■□□ 2.57
SORBS3-211ENST00000521554 HMGXB3Q12766 1538 aa31.1■■■□□ 2.57
SORBS3-211ENST00000521554 SMARCA4P51532 1647 aa31.09■■■□□ 2.57
SORBS3-211ENST00000521554 BAZ1BQ9UIG0 1483 aaKnown RBP30.96■■■□□ 2.55
SORBS3-211ENST00000521554 THOC2Q8NI27 1593 aaKnown RBP30.96■■■□□ 2.55
SORBS3-211ENST00000521554 BAZ1AQ9NRL2 1556 aaPredicted RBP30.82■■■□□ 2.52
SORBS3-211ENST00000521554 KIF21AQ7Z4S6 1674 aa30.8■■■□□ 2.52
SORBS3-211ENST00000521554 LAMC3Q9Y6N6 1575 aa30.79■■■□□ 2.52
SORBS3-211ENST00000521554 TRIM41Q8WV44 630 aa30.78■■■□□ 2.52
SORBS3-211ENST00000521554 PEG3Q9GZU2 1588 aa30.66■■■□□ 2.5
SORBS3-211ENST00000521554 PDS5BQ9NTI5 1447 aa30.62■■■□□ 2.49
SORBS3-211ENST00000521554 MROH2BQ7Z745 1585 aa30.57■■■□□ 2.48
SORBS3-211ENST00000521554 MRC2Q9UBG0 1479 aa30.45■■■□□ 2.47
SORBS3-211ENST00000521554 CADPSQ9ULU8 1353 aa30.38■■■□□ 2.45
SORBS3-211ENST00000521554 WDR62O43379 1518 aa30.36■■■□□ 2.45
SORBS3-211ENST00000521554 CEP164Q9UPV0 1460 aa30.24■■■□□ 2.43
SORBS3-211ENST00000521554 WIZO95785 1651 aa30.23■■■□□ 2.43
SORBS3-211ENST00000521554 FANCD2Q9BXW9 1451 aa30.12■■■□□ 2.41
SORBS3-211ENST00000521554 OSCARQ8IYS5 282 aa30.03■■■□□ 2.4
SORBS3-211ENST00000521554 URB2Q14146 1524 aaKnown RBP29.91■■■□□ 2.38
SORBS3-211ENST00000521554 CFTRP13569 1480 aa29.9■■■□□ 2.38
SORBS3-211ENST00000521554 RIMBP3CA6NJZ7 1639 aa29.82■■■□□ 2.36
SORBS3-211ENST00000521554 RIMBP3BA6NNM3 1639 aa29.82■■■□□ 2.36
SORBS3-211ENST00000521554 RIMBP3Q9UFD9 1639 aa29.82■■■□□ 2.36
SORBS3-211ENST00000521554 TOP2AP11388 1531 aaKnown RBP29.76■■■□□ 2.36
SORBS3-211ENST00000521554 PRDM2Q13029 1718 aa29.68■■■□□ 2.34
SORBS3-211ENST00000521554 RSF1Q96T23 1441 aaPredicted RBP29.67■■■□□ 2.34
SORBS3-211ENST00000521554 ZNF608Q9ULD9 1512 aaPredicted RBP29.66■■■□□ 2.34
SORBS3-211ENST00000521554 ARHGEF11O15085 1522 aa29.64■■■□□ 2.34
SORBS3-211ENST00000521554 IFT140Q96RY7 1462 aa29.6■■■□□ 2.33
SORBS3-211ENST00000521554 EIF4G3O43432 1585 aaKnown RBP29.51■■■□□ 2.31
SORBS3-211ENST00000521554 TOPBP1Q92547 1522 aa29.47■■■□□ 2.31
SORBS3-211ENST00000521554 CYB5RLQ6IPT4 315 aa29.46■■■□□ 2.31
SORBS3-211ENST00000521554 CHD1O14646 1710 aa29.42■■■□□ 2.3
SORBS3-211ENST00000521554 TRHP20396 242 aaPredicted RBP29.41■■■□□ 2.3
SORBS3-211ENST00000521554 CCDC88BA6NC98 1476 aa29.39■■■□□ 2.3
SORBS3-211ENST00000521554 FBLN2P98095 1184 aa29.33■■■□□ 2.29
SORBS3-211ENST00000521554 DNMBPQ6XZF7 1577 aa29.33■■■□□ 2.29
SORBS3-211ENST00000521554 ARAP1Q96P48 1450 aa29.31■■■□□ 2.28
SORBS3-211ENST00000521554 AQRO60306 1485 aaKnown RBP eCLIP29.29■■■□□ 2.289e-7■■■□□ 16.9
SORBS3-211ENST00000521554 ABCC8Q09428 1581 aa29.28■■■□□ 2.28
SORBS3-211ENST00000521554 TARBP1Q13395 1621 aaKnown RBP29.23■■■□□ 2.27
SORBS3-211ENST00000521554 POLA1P09884 1462 aaPredicted RBP29.14■■■□□ 2.26
SORBS3-211ENST00000521554 RAD54L2Q9Y4B4 1467 aa29.08■■■□□ 2.25
SORBS3-211ENST00000521554 SNAPC4Q5SXM2 1469 aa29.04■■■□□ 2.24
SORBS3-211ENST00000521554 TDRD9Q8NDG6 1382 aaKnown RBP29.03■■■□□ 2.24
SORBS3-211ENST00000521554 AEBP2Q6ZN18 517 aaPredicted RBP28.99■■■□□ 2.23
SORBS3-211ENST00000521554 SOGA1O94964 1423 aa28.97■■■□□ 2.23
SORBS3-211ENST00000521554 CLASP1Q7Z460 1538 aa28.96■■■□□ 2.23
SORBS3-211ENST00000521554 SYNJ1O43426 1573 aa28.95■■■□□ 2.22
SORBS3-211ENST00000521554 CHMP7Q8WUX9 453 aaPredicted RBP28.92■■■□□ 2.22
SORBS3-211ENST00000521554 FGD5Q6ZNL6 1462 aa28.91■■■□□ 2.22
SORBS3-211ENST00000521554 MAGI1Q96QZ7 1491 aaPredicted RBP28.85■■■□□ 2.21
SORBS3-211ENST00000521554 WDR97A6NE52 1622 aa28.84■■■□□ 2.21
SORBS3-211ENST00000521554 GRIN2BQ13224 1484 aa28.8■■■□□ 2.2
SORBS3-211ENST00000521554 CUX1P39880 1505 aa28.77■■■□□ 2.2
SORBS3-211ENST00000521554 SYNJ2O15056 1496 aa28.77■■■□□ 2.2
SORBS3-211ENST00000521554 PBRM1Q86U86 1689 aa28.75■■■□□ 2.19
SORBS3-211ENST00000521554 GAPVD1Q14C86 1478 aa28.72■■■□□ 2.19
SORBS3-211ENST00000521554 ERCC6L2Q5T890 1561 aa28.54■■■□□ 2.16
SORBS3-211ENST00000521554 ABCA5Q8WWZ7 1642 aa28.53■■■□□ 2.16
SORBS3-211ENST00000521554 ABCA10Q8WWZ4 1543 aa28.47■■■□□ 2.15
SORBS3-211ENST00000521554 GRIN2AQ12879 1464 aa28.45■■■□□ 2.14
SORBS3-211ENST00000521554 CEP170Q5SW79 1584 aa28.41■■■□□ 2.14
SORBS3-211ENST00000521554 ADAMTS12P58397 1594 aa28.41■■■□□ 2.14
SORBS3-211ENST00000521554 NUP160Q12769 1436 aa28.31■■■□□ 2.12
SORBS3-211ENST00000521554 KIF13AQ9H1H9 1805 aa28.29■■■□□ 2.12
SORBS3-211ENST00000521554 SHROOM2Q13796 1616 aa28.27■■■□□ 2.12
SORBS3-211ENST00000521554 WRNQ14191 1432 aaPredicted RBP eCLIP28.26■■■□□ 2.12
SORBS3-211ENST00000521554 FHAD1B1AJZ9 1412 aa28.22■■■□□ 2.11
SORBS3-211ENST00000521554 SUPT5HO00267 1087 aaKnown RBP28.17■■■□□ 2.1
SORBS3-211ENST00000521554 PRG4Q92954 1404 aaPredicted RBP28.16■■■□□ 2.1
SORBS3-211ENST00000521554 BIVM-ERCC5R4GMW8 1640 aa28.14■■■□□ 2.1
SORBS3-211ENST00000521554 TOP2BQ02880 1626 aa28.13■■■□□ 2.09
SORBS3-211ENST00000521554 ERICH3Q5RHP9 1530 aa28.1■■■□□ 2.09
SORBS3-211ENST00000521554 FAM69CQ0P6D2 419 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms