RNA–Protein interactions for RNA: ENST00000559605.1

PCSK6-211, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

TSL 3

Gene PCSK6, Length 379 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-211ENST00000559605 NISCHQ9Y2I1 1504 aa20.61■□□□□ 0.89
PCSK6-211ENST00000559605 CCDC180Q9P1Z9 1646 aa18.5■□□□□ 0.55
PCSK6-211ENST00000559605 ABCC9O60706 1549 aa18.33■□□□□ 0.53
PCSK6-211ENST00000559605 RB1CC1Q8TDY2 1594 aa17.57■□□□□ 0.4
PCSK6-211ENST00000559605 NACADO15069 1562 aa17.45■□□□□ 0.38
PCSK6-211ENST00000559605 DCAF8L2P0C7V8 631 aa17.41■□□□□ 0.38
PCSK6-211ENST00000559605 MYO15BQ96JP2 1530 aa17.23■□□□□ 0.35
PCSK6-211ENST00000559605 ZCCHC6Q5VYS8 1495 aaKnown RBP17.18■□□□□ 0.34
PCSK6-211ENST00000559605 UNC13AQ9UPW8 1703 aa17.07■□□□□ 0.32
PCSK6-211ENST00000559605 DCAF1Q9Y4B6 1507 aa17.06■□□□□ 0.32
PCSK6-211ENST00000559605 PABPN1Q86U42 306 aaKnown RBP eCLIP17.05■□□□□ 0.32
PCSK6-211ENST00000559605 DNAJC5BQ9UF47 199 aa16.93■□□□□ 0.3
PCSK6-211ENST00000559605 BICRAQ9NZM4 1560 aa16.92■□□□□ 0.3
PCSK6-211ENST00000559605 SHROOM4Q9ULL8 1493 aa16.86■□□□□ 0.29
PCSK6-211ENST00000559605 SCRIBQ14160 1630 aa16.85■□□□□ 0.29
PCSK6-211ENST00000559605 CC2D2AQ9P2K1 1620 aa16.56■□□□□ 0.24
PCSK6-211ENST00000559605 EIF4G1Q04637 1599 aaKnown RBP16.56■□□□□ 0.24
PCSK6-211ENST00000559605 CECR2Q9BXF3 1484 aa16.53■□□□□ 0.24
PCSK6-211ENST00000559605 SMARCA2P51531 1590 aa16.08■□□□□ 0.16
PCSK6-211ENST00000559605 SMARCA4P51532 1647 aa16.08■□□□□ 0.16
PCSK6-211ENST00000559605 NCAPD3P42695 1498 aa16.06■□□□□ 0.16
PCSK6-211ENST00000559605 BAZ1AQ9NRL2 1556 aaPredicted RBP16.04■□□□□ 0.16
PCSK6-211ENST00000559605 ATAD2BQ9ULI0 1458 aa16.03■□□□□ 0.16
PCSK6-211ENST00000559605 HMGXB3Q12766 1538 aa16■□□□□ 0.15
PCSK6-211ENST00000559605 BAZ1BQ9UIG0 1483 aaKnown RBP15.96■□□□□ 0.14
PCSK6-211ENST00000559605 ERCC6Q03468 1493 aa15.92■□□□□ 0.14
PCSK6-211ENST00000559605 PEG3Q9GZU2 1588 aa15.89■□□□□ 0.13
PCSK6-211ENST00000559605 MROH2BQ7Z745 1585 aa15.84■□□□□ 0.13
PCSK6-211ENST00000559605 CUX2O14529 1486 aa15.81■□□□□ 0.12
PCSK6-211ENST00000559605 LAMC3Q9Y6N6 1575 aa15.74■□□□□ 0.11
PCSK6-211ENST00000559605 NESP48681 1621 aa15.73■□□□□ 0.11
PCSK6-211ENST00000559605 WIZO95785 1651 aa15.72■□□□□ 0.11
PCSK6-211ENST00000559605 RSF1Q96T23 1441 aaPredicted RBP15.69■□□□□ 0.1
PCSK6-211ENST00000559605 PDS5BQ9NTI5 1447 aa15.67■□□□□ 0.1
PCSK6-211ENST00000559605 CADPSQ9ULU8 1353 aa15.6■□□□□ 0.09
PCSK6-211ENST00000559605 THOC2Q8NI27 1593 aaKnown RBP15.59■□□□□ 0.09
PCSK6-211ENST00000559605 KIF21AQ7Z4S6 1674 aa15.58■□□□□ 0.08
PCSK6-211ENST00000559605 TOP2AP11388 1531 aaKnown RBP15.58■□□□□ 0.08
PCSK6-211ENST00000559605 DNAJC5Q9H3Z4 198 aa15.56■□□□□ 0.08
PCSK6-211ENST00000559605 MRC2Q9UBG0 1479 aa15.5■□□□□ 0.07
PCSK6-211ENST00000559605 CEP164Q9UPV0 1460 aa15.48■□□□□ 0.07
PCSK6-211ENST00000559605 SUPT5HO00267 1087 aaKnown RBP15.45■□□□□ 0.06
PCSK6-211ENST00000559605 FANCD2Q9BXW9 1451 aa15.44■□□□□ 0.06
PCSK6-211ENST00000559605 CFTRP13569 1480 aa15.43■□□□□ 0.06
PCSK6-211ENST00000559605 WDR62O43379 1518 aa15.43■□□□□ 0.06
PCSK6-211ENST00000559605 PRDM2Q13029 1718 aa15.35■□□□□ 0.05
PCSK6-211ENST00000559605 CCDC88BA6NC98 1476 aa15.33■□□□□ 0.05
PCSK6-211ENST00000559605 URB2Q14146 1524 aaKnown RBP15.26■□□□□ 0.03
PCSK6-211ENST00000559605 ABCC8Q09428 1581 aa15.19■□□□□ 0.02
PCSK6-211ENST00000559605 IFT140Q96RY7 1462 aa15.16■□□□□ 0.02
PCSK6-211ENST00000559605 TOPBP1Q92547 1522 aa15.15■□□□□ 0.02
PCSK6-211ENST00000559605 DNMBPQ6XZF7 1577 aa15.13■□□□□ 0.01
PCSK6-211ENST00000559605 OSCARQ8IYS5 282 aa15.09■□□□□ 0.01
PCSK6-211ENST00000559605 ZNF608Q9ULD9 1512 aaPredicted RBP15.03■□□□□ -0
PCSK6-211ENST00000559605 EIF4G3O43432 1585 aaKnown RBP15.02■□□□□ -0
PCSK6-211ENST00000559605 TRIM41Q8WV44 630 aa15.01□□□□□ -0.01
PCSK6-211ENST00000559605 POLA1P09884 1462 aaPredicted RBP14.99□□□□□ -0.01
PCSK6-211ENST00000559605 TARBP1Q13395 1621 aaKnown RBP14.97□□□□□ -0.01
PCSK6-211ENST00000559605 SOGA1O94964 1423 aa14.94□□□□□ -0.02
PCSK6-211ENST00000559605 WDR97A6NE52 1622 aa14.93□□□□□ -0.02
PCSK6-211ENST00000559605 AQRO60306 1485 aaKnown RBP eCLIP14.93□□□□□ -0.02
PCSK6-211ENST00000559605 FGD5Q6ZNL6 1462 aa14.93□□□□□ -0.02
PCSK6-211ENST00000559605 RAD54L2Q9Y4B4 1467 aa14.91□□□□□ -0.02
PCSK6-211ENST00000559605 FBLN2P98095 1184 aa14.9□□□□□ -0.02
PCSK6-211ENST00000559605 CUX1P39880 1505 aa14.9□□□□□ -0.02
PCSK6-211ENST00000559605 CHD1O14646 1710 aa14.88□□□□□ -0.03
PCSK6-211ENST00000559605 TDRD9Q8NDG6 1382 aaKnown RBP14.86□□□□□ -0.03
PCSK6-211ENST00000559605 RIMBP3CA6NJZ7 1639 aa14.85□□□□□ -0.03
PCSK6-211ENST00000559605 RIMBP3BA6NNM3 1639 aa14.85□□□□□ -0.03
PCSK6-211ENST00000559605 RIMBP3Q9UFD9 1639 aa14.85□□□□□ -0.03
PCSK6-211ENST00000559605 WRNQ14191 1432 aaPredicted RBP eCLIP14.85□□□□□ -0.03
PCSK6-211ENST00000559605 SNAPC4Q5SXM2 1469 aa14.83□□□□□ -0.03
PCSK6-211ENST00000559605 MAGI1Q96QZ7 1491 aaPredicted RBP14.83□□□□□ -0.03
PCSK6-211ENST00000559605 GRIN2BQ13224 1484 aa14.82□□□□□ -0.04
PCSK6-211ENST00000559605 ARHGEF11O15085 1522 aa14.82□□□□□ -0.04
PCSK6-211ENST00000559605 BIVM-ERCC5R4GMW8 1640 aa14.82□□□□□ -0.04
PCSK6-211ENST00000559605 TOP2BQ02880 1626 aa14.81□□□□□ -0.04
PCSK6-211ENST00000559605 CHMP7Q8WUX9 453 aaPredicted RBP14.81□□□□□ -0.04
PCSK6-211ENST00000559605 SYNJ1O43426 1573 aa14.81□□□□□ -0.04
PCSK6-211ENST00000559605 GAPVD1Q14C86 1478 aa14.78□□□□□ -0.04
PCSK6-211ENST00000559605 PBRM1Q86U86 1689 aa14.77□□□□□ -0.04
PCSK6-211ENST00000559605 ABCA10Q8WWZ4 1543 aa14.77□□□□□ -0.04
PCSK6-211ENST00000559605 SYNJ2O15056 1496 aa14.76□□□□□ -0.05
PCSK6-211ENST00000559605 ABCA5Q8WWZ7 1642 aa14.73□□□□□ -0.05
PCSK6-211ENST00000559605 CYB5RLQ6IPT4 315 aa14.7□□□□□ -0.06
PCSK6-211ENST00000559605 CLASP1Q7Z460 1538 aa14.69□□□□□ -0.06
PCSK6-211ENST00000559605 ARAP1Q96P48 1450 aa14.66□□□□□ -0.06
PCSK6-211ENST00000559605 ADAMTS12P58397 1594 aa14.64□□□□□ -0.07
PCSK6-211ENST00000559605 GRIN2AQ12879 1464 aa14.62□□□□□ -0.07
PCSK6-211ENST00000559605 ERICH3Q5RHP9 1530 aa14.61□□□□□ -0.07
PCSK6-211ENST00000559605 FHAD1B1AJZ9 1412 aa14.61□□□□□ -0.07
PCSK6-211ENST00000559605 TRHP20396 242 aaPredicted RBP14.57□□□□□ -0.08
PCSK6-211ENST00000559605 KIF27Q86VH2 1401 aa14.54□□□□□ -0.08
PCSK6-211ENST00000559605 NUP160Q12769 1436 aa14.53□□□□□ -0.08
PCSK6-211ENST00000559605 CEP170Q5SW79 1584 aa14.52□□□□□ -0.08
PCSK6-211ENST00000559605 CUL7Q14999 1698 aa14.46□□□□□ -0.09
PCSK6-211ENST00000559605 SHROOM2Q13796 1616 aa14.45□□□□□ -0.1
PCSK6-211ENST00000559605 CHIC1Q5VXU3 224 aa14.44□□□□□ -0.1
PCSK6-211ENST00000559605 ERCC6L2Q5T890 1561 aa14.42□□□□□ -0.1
PCSK6-211ENST00000559605 PRG4Q92954 1404 aaPredicted RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms