RNA–Protein interactions for RNA: ENST00000569721.1

PDPK1-216, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 5

Gene PDPK1, Length 330 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-216ENST00000569721 NISCHQ9Y2I1 1504 aa50.1■■■■■ 5.61
PDPK1-216ENST00000569721 CCDC180Q9P1Z9 1646 aa44.56■■■■■ 4.72
PDPK1-216ENST00000569721 ABCC9O60706 1549 aa43.83■■■■■ 4.61
PDPK1-216ENST00000569721 DCAF8L2P0C7V8 631 aa42.08■■■■■ 4.33
PDPK1-216ENST00000569721 RB1CC1Q8TDY2 1594 aa42.05■■■■■ 4.32
PDPK1-216ENST00000569721 NACADO15069 1562 aa41.96■■■■■ 4.31
PDPK1-216ENST00000569721 ZCCHC6Q5VYS8 1495 aaKnown RBP41.66■■■■■ 4.26
PDPK1-216ENST00000569721 MYO15BQ96JP2 1530 aa41.62■■■■■ 4.25
PDPK1-216ENST00000569721 DCAF1Q9Y4B6 1507 aa41.39■■■■■ 4.22
PDPK1-216ENST00000569721 UNC13AQ9UPW8 1703 aa41.1■■■■■ 4.17
PDPK1-216ENST00000569721 PABPN1Q86U42 306 aaKnown RBP eCLIP40.98■■■■■ 4.15
PDPK1-216ENST00000569721 BICRAQ9NZM4 1560 aa40.78■■■■■ 4.12
PDPK1-216ENST00000569721 SCRIBQ14160 1630 aa40.7■■■■■ 4.11
PDPK1-216ENST00000569721 DNAJC5BQ9UF47 199 aa40.4■■■■■ 4.06
PDPK1-216ENST00000569721 SHROOM4Q9ULL8 1493 aa40.28■■■■■ 4.04
PDPK1-216ENST00000569721 EIF4G1Q04637 1599 aaKnown RBP39.72■■■■□ 3.95
PDPK1-216ENST00000569721 CC2D2AQ9P2K1 1620 aa39.61■■■■□ 3.93
PDPK1-216ENST00000569721 CECR2Q9BXF3 1484 aa39.38■■■■□ 3.9
PDPK1-216ENST00000569721 SMARCA4P51532 1647 aa38.89■■■■□ 3.82
PDPK1-216ENST00000569721 BAZ1AQ9NRL2 1556 aaPredicted RBP38.82■■■■□ 3.81
PDPK1-216ENST00000569721 NCAPD3P42695 1498 aa38.73■■■■□ 3.79
PDPK1-216ENST00000569721 ATAD2BQ9ULI0 1458 aa38.73■■■■□ 3.79
PDPK1-216ENST00000569721 SMARCA2P51531 1590 aa38.67■■■■□ 3.78
PDPK1-216ENST00000569721 MROH2BQ7Z745 1585 aa38.61■■■■□ 3.77
PDPK1-216ENST00000569721 HMGXB3Q12766 1538 aa38.49■■■■□ 3.75
PDPK1-216ENST00000569721 PEG3Q9GZU2 1588 aa38.48■■■■□ 3.75
PDPK1-216ENST00000569721 BAZ1BQ9UIG0 1483 aaKnown RBP38.42■■■■□ 3.74
PDPK1-216ENST00000569721 WIZO95785 1651 aa38.2■■■■□ 3.71
PDPK1-216ENST00000569721 RSF1Q96T23 1441 aaPredicted RBP38.12■■■■□ 3.69
PDPK1-216ENST00000569721 NESP48681 1621 aa37.88■■■■□ 3.65
PDPK1-216ENST00000569721 ERCC6Q03468 1493 aa37.8■■■■□ 3.64
PDPK1-216ENST00000569721 TOP2AP11388 1531 aaKnown RBP37.76■■■■□ 3.63
PDPK1-216ENST00000569721 LAMC3Q9Y6N6 1575 aa37.72■■■■□ 3.63
PDPK1-216ENST00000569721 CADPSQ9ULU8 1353 aa37.62■■■■□ 3.61
PDPK1-216ENST00000569721 PDS5BQ9NTI5 1447 aa37.51■■■■□ 3.59
PDPK1-216ENST00000569721 CUX2O14529 1486 aa37.4■■■■□ 3.58
PDPK1-216ENST00000569721 KIF21AQ7Z4S6 1674 aa37.4■■■■□ 3.58
PDPK1-216ENST00000569721 CCDC88BA6NC98 1476 aa37.35■■■■□ 3.57
PDPK1-216ENST00000569721 CFTRP13569 1480 aa37.33■■■■□ 3.57
PDPK1-216ENST00000569721 THOC2Q8NI27 1593 aaKnown RBP37.28■■■■□ 3.56
PDPK1-216ENST00000569721 FANCD2Q9BXW9 1451 aa37.18■■■■□ 3.54
PDPK1-216ENST00000569721 SUPT5HO00267 1087 aaKnown RBP37.15■■■■□ 3.54
PDPK1-216ENST00000569721 CEP164Q9UPV0 1460 aa37.14■■■■□ 3.54
PDPK1-216ENST00000569721 MRC2Q9UBG0 1479 aa37.12■■■■□ 3.53
PDPK1-216ENST00000569721 PRDM2Q13029 1718 aa37.02■■■■□ 3.52
PDPK1-216ENST00000569721 WDR62O43379 1518 aa36.97■■■■□ 3.51
PDPK1-216ENST00000569721 URB2Q14146 1524 aaKnown RBP36.8■■■■□ 3.48
PDPK1-216ENST00000569721 TOPBP1Q92547 1522 aa36.57■■■■□ 3.44
PDPK1-216ENST00000569721 ABCC8Q09428 1581 aa36.56■■■■□ 3.44
PDPK1-216ENST00000569721 DNAJC5Q9H3Z4 198 aa36.5■■■■□ 3.43
PDPK1-216ENST00000569721 DNMBPQ6XZF7 1577 aa36.49■■■■□ 3.43
PDPK1-216ENST00000569721 IFT140Q96RY7 1462 aa36.37■■■■□ 3.41
PDPK1-216ENST00000569721 POLA1P09884 1462 aaPredicted RBP36.24■■■■□ 3.39
PDPK1-216ENST00000569721 CUX1P39880 1505 aa36.23■■■■□ 3.39
PDPK1-216ENST00000569721 ZNF608Q9ULD9 1512 aaPredicted RBP36.23■■■■□ 3.39
PDPK1-216ENST00000569721 TARBP1Q13395 1621 aaKnown RBP36.16■■■■□ 3.38
PDPK1-216ENST00000569721 FGD5Q6ZNL6 1462 aa36.14■■■■□ 3.38
PDPK1-216ENST00000569721 SOGA1O94964 1423 aa36.13■■■■□ 3.37
PDPK1-216ENST00000569721 RAD54L2Q9Y4B4 1467 aa36.11■■■■□ 3.37
PDPK1-216ENST00000569721 EIF4G3O43432 1585 aaKnown RBP36.05■■■■□ 3.36
PDPK1-216ENST00000569721 AQRO60306 1485 aaKnown RBP eCLIP36.04■■■■□ 3.36
PDPK1-216ENST00000569721 TDRD9Q8NDG6 1382 aaKnown RBP35.96■■■■□ 3.35
PDPK1-216ENST00000569721 WRNQ14191 1432 aaPredicted RBP eCLIP35.96■■■■□ 3.35
PDPK1-216ENST00000569721 OSCARQ8IYS5 282 aa35.91■■■■□ 3.34
PDPK1-216ENST00000569721 TOP2BQ02880 1626 aa35.86■■■■□ 3.33
PDPK1-216ENST00000569721 BIVM-ERCC5R4GMW8 1640 aa35.86■■■■□ 3.33
PDPK1-216ENST00000569721 SYNJ1O43426 1573 aa35.85■■■■□ 3.33
PDPK1-216ENST00000569721 WDR97A6NE52 1622 aa35.83■■■■□ 3.33
PDPK1-216ENST00000569721 ABCA10Q8WWZ4 1543 aa35.77■■■■□ 3.32
PDPK1-216ENST00000569721 FBLN2P98095 1184 aa35.7■■■■□ 3.31
PDPK1-216ENST00000569721 GRIN2BQ13224 1484 aa35.69■■■■□ 3.3
PDPK1-216ENST00000569721 GAPVD1Q14C86 1478 aa35.69■■■■□ 3.3
PDPK1-216ENST00000569721 SNAPC4Q5SXM2 1469 aa35.67■■■■□ 3.3
PDPK1-216ENST00000569721 CHD1O14646 1710 aa35.65■■■■□ 3.3
PDPK1-216ENST00000569721 ABCA5Q8WWZ7 1642 aa35.61■■■■□ 3.29
PDPK1-216ENST00000569721 MAGI1Q96QZ7 1491 aaPredicted RBP35.6■■■■□ 3.29
PDPK1-216ENST00000569721 PBRM1Q86U86 1689 aa35.59■■■■□ 3.29
PDPK1-216ENST00000569721 CHMP7Q8WUX9 453 aaPredicted RBP35.55■■■■□ 3.28
PDPK1-216ENST00000569721 SYNJ2O15056 1496 aa35.48■■■■□ 3.27
PDPK1-216ENST00000569721 ERICH3Q5RHP9 1530 aa35.32■■■■□ 3.25
PDPK1-216ENST00000569721 TRIM41Q8WV44 630 aa35.3■■■■□ 3.24
PDPK1-216ENST00000569721 ADAMTS12P58397 1594 aa35.3■■■■□ 3.24
PDPK1-216ENST00000569721 RIMBP3CA6NJZ7 1639 aa35.28■■■■□ 3.24
PDPK1-216ENST00000569721 RIMBP3BA6NNM3 1639 aa35.28■■■■□ 3.24
PDPK1-216ENST00000569721 RIMBP3Q9UFD9 1639 aa35.28■■■■□ 3.24
PDPK1-216ENST00000569721 FHAD1B1AJZ9 1412 aa35.26■■■■□ 3.24
PDPK1-216ENST00000569721 ARHGEF11O15085 1522 aa35.26■■■■□ 3.23
PDPK1-216ENST00000569721 KIF27Q86VH2 1401 aa35.23■■■■□ 3.23
PDPK1-216ENST00000569721 GRIN2AQ12879 1464 aa35.23■■■■□ 3.23
PDPK1-216ENST00000569721 CLASP1Q7Z460 1538 aa35.22■■■■□ 3.23
PDPK1-216ENST00000569721 IGF1RP08069 1367 aa35.12■■■■□ 3.21
PDPK1-216ENST00000569721 NUP160Q12769 1436 aa35.06■■■■□ 3.2
PDPK1-216ENST00000569721 CEP170Q5SW79 1584 aa35.05■■■■□ 3.2
PDPK1-216ENST00000569721 CYB5RLQ6IPT4 315 aa35.04■■■■□ 3.2
PDPK1-216ENST00000569721 CUL7Q14999 1698 aa34.97■■■■□ 3.19
PDPK1-216ENST00000569721 ARAP1Q96P48 1450 aa34.97■■■■□ 3.19
PDPK1-216ENST00000569721 CARMIL1Q5VZK9 1371 aa34.91■■■■□ 3.18
PDPK1-216ENST00000569721 RUSC2Q8N2Y8 1516 aa34.88■■■■□ 3.17
PDPK1-216ENST00000569721 SHROOM2Q13796 1616 aa34.8■■■■□ 3.16
PDPK1-216ENST00000569721 JPH4Q96JJ6 628 aa34.78■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms