RNA–Protein interactions for RNA: ENST00000599724.5

LTBP4-226, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 5

Gene LTBP4, Length 910 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-226ENST00000599724 NISCHQ9Y2I1 1504 aa38.65■■■■□ 3.78
LTBP4-226ENST00000599724 CCDC180Q9P1Z9 1646 aa34.53■■■■□ 3.12
LTBP4-226ENST00000599724 ABCC9O60706 1549 aa34.13■■■■□ 3.05
LTBP4-226ENST00000599724 RB1CC1Q8TDY2 1594 aa32.7■■■□□ 2.82
LTBP4-226ENST00000599724 DCAF8L2P0C7V8 631 aa32.66■■■□□ 2.82
LTBP4-226ENST00000599724 NACADO15069 1562 aa32.55■■■□□ 2.8
LTBP4-226ENST00000599724 MYO15BQ96JP2 1530 aa32.19■■■□□ 2.74
LTBP4-226ENST00000599724 ZCCHC6Q5VYS8 1495 aaKnown RBP32.07■■■□□ 2.72
LTBP4-226ENST00000599724 UNC13AQ9UPW8 1703 aa31.98■■■□□ 2.71
LTBP4-226ENST00000599724 DCAF1Q9Y4B6 1507 aa31.93■■■□□ 2.7
LTBP4-226ENST00000599724 PABPN1Q86U42 306 aaKnown RBP eCLIP31.88■■■□□ 2.69
LTBP4-226ENST00000599724 BICRAQ9NZM4 1560 aa31.64■■■□□ 2.65
LTBP4-226ENST00000599724 DNAJC5BQ9UF47 199 aa31.62■■■□□ 2.65
LTBP4-226ENST00000599724 SCRIBQ14160 1630 aa31.49■■■□□ 2.63
LTBP4-226ENST00000599724 SHROOM4Q9ULL8 1493 aa31.27■■■□□ 2.6
LTBP4-226ENST00000599724 EIF4G1Q04637 1599 aaKnown RBP30.86■■■□□ 2.53
LTBP4-226ENST00000599724 CC2D2AQ9P2K1 1620 aa30.85■■■□□ 2.53
LTBP4-226ENST00000599724 CECR2Q9BXF3 1484 aa30.7■■■□□ 2.51
LTBP4-226ENST00000599724 SMARCA4P51532 1647 aa30.07■■■□□ 2.4
LTBP4-226ENST00000599724 NCAPD3P42695 1498 aa30.01■■■□□ 2.4
LTBP4-226ENST00000599724 BAZ1AQ9NRL2 1556 aaPredicted RBP30■■■□□ 2.39
LTBP4-226ENST00000599724 ATAD2BQ9ULI0 1458 aa29.98■■■□□ 2.39
LTBP4-226ENST00000599724 SMARCA2P51531 1590 aa29.97■■■□□ 2.39
LTBP4-226ENST00000599724 HMGXB3Q12766 1538 aa29.81■■■□□ 2.36
LTBP4-226ENST00000599724 MROH2BQ7Z745 1585 aa29.77■■■□□ 2.36
LTBP4-226ENST00000599724 BAZ1BQ9UIG0 1483 aaKnown RBP29.75■■■□□ 2.35
LTBP4-226ENST00000599724 PEG3Q9GZU2 1588 aa29.73■■■□□ 2.35
LTBP4-226ENST00000599724 ERCC6Q03468 1493 aa29.49■■■□□ 2.31
LTBP4-226ENST00000599724 WIZO95785 1651 aa29.49■■■□□ 2.31
LTBP4-226ENST00000599724 NESP48681 1621 aa29.42■■■□□ 2.3
LTBP4-226ENST00000599724 LAMC3Q9Y6N6 1575 aa29.31■■■□□ 2.28
LTBP4-226ENST00000599724 RSF1Q96T23 1441 aaPredicted RBP29.31■■■□□ 2.28
LTBP4-226ENST00000599724 CUX2O14529 1486 aa29.23■■■□□ 2.27
LTBP4-226ENST00000599724 PDS5BQ9NTI5 1447 aa29.16■■■□□ 2.26
LTBP4-226ENST00000599724 CADPSQ9ULU8 1353 aa29.15■■■□□ 2.26
LTBP4-226ENST00000599724 TOP2AP11388 1531 aaKnown RBP29.1■■■□□ 2.25
LTBP4-226ENST00000599724 KIF21AQ7Z4S6 1674 aa29.1■■■□□ 2.25
LTBP4-226ENST00000599724 THOC2Q8NI27 1593 aaKnown RBP28.99■■■□□ 2.23
LTBP4-226ENST00000599724 CFTRP13569 1480 aa28.87■■■□□ 2.21
LTBP4-226ENST00000599724 MRC2Q9UBG0 1479 aa28.83■■■□□ 2.21
LTBP4-226ENST00000599724 CEP164Q9UPV0 1460 aa28.82■■■□□ 2.2
LTBP4-226ENST00000599724 FANCD2Q9BXW9 1451 aa28.81■■■□□ 2.2
LTBP4-226ENST00000599724 DNAJC5Q9H3Z4 198 aa28.8■■■□□ 2.2
LTBP4-226ENST00000599724 CCDC88BA6NC98 1476 aa28.79■■■□□ 2.2
LTBP4-226ENST00000599724 PRDM2Q13029 1718 aa28.72■■■□□ 2.19
LTBP4-226ENST00000599724 WDR62O43379 1518 aa28.7■■■□□ 2.19
LTBP4-226ENST00000599724 URB2Q14146 1524 aaKnown RBP28.51■■■□□ 2.15
LTBP4-226ENST00000599724 SUPT5HO00267 1087 aaKnown RBP28.49■■■□□ 2.15
LTBP4-226ENST00000599724 ABCC8Q09428 1581 aa28.35■■■□□ 2.13
LTBP4-226ENST00000599724 TOPBP1Q92547 1522 aa28.3■■■□□ 2.12
LTBP4-226ENST00000599724 DNMBPQ6XZF7 1577 aa28.24■■■□□ 2.11
LTBP4-226ENST00000599724 IFT140Q96RY7 1462 aa28.22■■■□□ 2.11
LTBP4-226ENST00000599724 ZNF608Q9ULD9 1512 aaPredicted RBP28.1■■■□□ 2.09
LTBP4-226ENST00000599724 OSCARQ8IYS5 282 aa28.09■■■□□ 2.09
LTBP4-226ENST00000599724 POLA1P09884 1462 aaPredicted RBP28.02■■■□□ 2.08
LTBP4-226ENST00000599724 TARBP1Q13395 1621 aaKnown RBP28.01■■■□□ 2.07
LTBP4-226ENST00000599724 SOGA1O94964 1423 aa27.99■■■□□ 2.07
LTBP4-226ENST00000599724 EIF4G3O43432 1585 aaKnown RBP27.98■■■□□ 2.07
LTBP4-226ENST00000599724 CUX1P39880 1505 aa27.94■■■□□ 2.06
LTBP4-226ENST00000599724 AQRO60306 1485 aaKnown RBP eCLIP27.94■■■□□ 2.065e-7■■□□□ 14
LTBP4-226ENST00000599724 RAD54L2Q9Y4B4 1467 aa27.94■■■□□ 2.06
LTBP4-226ENST00000599724 FGD5Q6ZNL6 1462 aa27.93■■■□□ 2.06
LTBP4-226ENST00000599724 TDRD9Q8NDG6 1382 aaKnown RBP27.86■■■□□ 2.05
LTBP4-226ENST00000599724 FBLN2P98095 1184 aa27.8■■■□□ 2.04
LTBP4-226ENST00000599724 WDR97A6NE52 1622 aa27.78■■■□□ 2.04
LTBP4-226ENST00000599724 TRIM41Q8WV44 630 aa27.77■■■□□ 2.04
LTBP4-226ENST00000599724 CHD1O14646 1710 aa27.76■■■□□ 2.03
LTBP4-226ENST00000599724 WRNQ14191 1432 aaPredicted RBP eCLIP27.68■■■□□ 2.02
LTBP4-226ENST00000599724 GRIN2BQ13224 1484 aa27.66■■■□□ 2.02
LTBP4-226ENST00000599724 CHMP7Q8WUX9 453 aaPredicted RBP27.65■■■□□ 2.02
LTBP4-226ENST00000599724 SNAPC4Q5SXM2 1469 aa27.64■■■□□ 2.02
LTBP4-226ENST00000599724 TOP2BQ02880 1626 aa27.64■■■□□ 2.02
LTBP4-226ENST00000599724 BIVM-ERCC5R4GMW8 1640 aa27.64■■■□□ 2.02
LTBP4-226ENST00000599724 GAPVD1Q14C86 1478 aa27.63■■■□□ 2.01
LTBP4-226ENST00000599724 ABCA10Q8WWZ4 1543 aa27.62■■■□□ 2.01
LTBP4-226ENST00000599724 MAGI1Q96QZ7 1491 aaPredicted RBP27.61■■■□□ 2.01
LTBP4-226ENST00000599724 PBRM1Q86U86 1689 aa27.61■■■□□ 2.01
LTBP4-226ENST00000599724 SYNJ1O43426 1573 aa27.59■■■□□ 2.01
LTBP4-226ENST00000599724 RIMBP3CA6NJZ7 1639 aa27.58■■■□□ 2.01
LTBP4-226ENST00000599724 RIMBP3BA6NNM3 1639 aa27.58■■■□□ 2.01
LTBP4-226ENST00000599724 RIMBP3Q9UFD9 1639 aa27.58■■■□□ 2.01
LTBP4-226ENST00000599724 ABCA5Q8WWZ7 1642 aa27.53■■■□□ 2
LTBP4-226ENST00000599724 ARHGEF11O15085 1522 aa27.51■■□□□ 1.99
LTBP4-226ENST00000599724 SYNJ2O15056 1496 aa27.51■■□□□ 1.99
LTBP4-226ENST00000599724 CYB5RLQ6IPT4 315 aa27.4■■□□□ 1.98
LTBP4-226ENST00000599724 CLASP1Q7Z460 1538 aa27.35■■□□□ 1.97
LTBP4-226ENST00000599724 ERICH3Q5RHP9 1530 aa27.31■■□□□ 1.96
LTBP4-226ENST00000599724 FHAD1B1AJZ9 1412 aa27.29■■□□□ 1.96
LTBP4-226ENST00000599724 ADAMTS12P58397 1594 aa27.28■■□□□ 1.96
LTBP4-226ENST00000599724 GRIN2AQ12879 1464 aa27.28■■□□□ 1.96
LTBP4-226ENST00000599724 ARAP1Q96P48 1450 aa27.24■■□□□ 1.95
LTBP4-226ENST00000599724 KIF27Q86VH2 1401 aa27.16■■□□□ 1.94
LTBP4-226ENST00000599724 CEP170Q5SW79 1584 aa27.14■■□□□ 1.94
LTBP4-226ENST00000599724 NUP160Q12769 1436 aa27.14■■□□□ 1.93
LTBP4-226ENST00000599724 IGF1RP08069 1367 aa27.07■■□□□ 1.92
LTBP4-226ENST00000599724 CUL7Q14999 1698 aa27.02■■□□□ 1.92
LTBP4-226ENST00000599724 TRHP20396 242 aaPredicted RBP27.02■■□□□ 1.92
LTBP4-226ENST00000599724 JPH4Q96JJ6 628 aa27■■□□□ 1.91
LTBP4-226ENST00000599724 SHROOM2Q13796 1616 aa26.99■■□□□ 1.91
LTBP4-226ENST00000599724 ERCC6L2Q5T890 1561 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms