RNA–Protein interactions for RNA: ENST00000560902.5

PCSK6-213, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

TSL 4

Gene PCSK6, Length 501 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-213ENST00000560902 NISCHQ9Y2I1 1504 aa19.19■□□□□ 0.66
PCSK6-213ENST00000560902 ABCC9O60706 1549 aa17.87■□□□□ 0.45
PCSK6-213ENST00000560902 CCDC180Q9P1Z9 1646 aa17.37■□□□□ 0.37
PCSK6-213ENST00000560902 DNAJC5BQ9UF47 199 aa17.13■□□□□ 0.33
PCSK6-213ENST00000560902 RB1CC1Q8TDY2 1594 aa16.72■□□□□ 0.27
PCSK6-213ENST00000560902 PABPN1Q86U42 306 aaKnown RBP eCLIP16.58■□□□□ 0.24
PCSK6-213ENST00000560902 UNC13AQ9UPW8 1703 aa16.49■□□□□ 0.23
PCSK6-213ENST00000560902 NACADO15069 1562 aa16.48■□□□□ 0.23
PCSK6-213ENST00000560902 DCAF8L2P0C7V8 631 aa16.43■□□□□ 0.22
PCSK6-213ENST00000560902 BICRAQ9NZM4 1560 aa16.34■□□□□ 0.21
PCSK6-213ENST00000560902 CC2D2AQ9P2K1 1620 aa16.08■□□□□ 0.17
PCSK6-213ENST00000560902 CECR2Q9BXF3 1484 aa16.08■□□□□ 0.16
PCSK6-213ENST00000560902 MYO15BQ96JP2 1530 aa16.05■□□□□ 0.16
PCSK6-213ENST00000560902 EIF4G1Q04637 1599 aaKnown RBP15.93■□□□□ 0.14
PCSK6-213ENST00000560902 SCRIBQ14160 1630 aa15.91■□□□□ 0.14
PCSK6-213ENST00000560902 DNAJC5Q9H3Z4 198 aa15.91■□□□□ 0.14
PCSK6-213ENST00000560902 SHROOM4Q9ULL8 1493 aa15.88■□□□□ 0.13
PCSK6-213ENST00000560902 ZCCHC6Q5VYS8 1495 aaKnown RBP15.82■□□□□ 0.12
PCSK6-213ENST00000560902 DCAF1Q9Y4B6 1507 aa15.73■□□□□ 0.11
PCSK6-213ENST00000560902 CUX2O14529 1486 aa15.43■□□□□ 0.06
PCSK6-213ENST00000560902 ERCC6Q03468 1493 aa15.39■□□□□ 0.05
PCSK6-213ENST00000560902 NESP48681 1621 aa15.26■□□□□ 0.03
PCSK6-213ENST00000560902 NCAPD3P42695 1498 aa15.22■□□□□ 0.03
PCSK6-213ENST00000560902 ATAD2BQ9ULI0 1458 aa15.17■□□□□ 0.02
PCSK6-213ENST00000560902 TRIM41Q8WV44 630 aa15.15■□□□□ 0.02
PCSK6-213ENST00000560902 THOC2Q8NI27 1593 aaKnown RBP15.14■□□□□ 0.01
PCSK6-213ENST00000560902 HMGXB3Q12766 1538 aa15.09■□□□□ 0.01
PCSK6-213ENST00000560902 SMARCA4P51532 1647 aa15.09■□□□□ 0.01
PCSK6-213ENST00000560902 SMARCA2P51531 1590 aa15.08■□□□□ 0
PCSK6-213ENST00000560902 KIF21AQ7Z4S6 1674 aa15.06■□□□□ 0
PCSK6-213ENST00000560902 BAZ1BQ9UIG0 1483 aaKnown RBP15□□□□□ -0.01
PCSK6-213ENST00000560902 LAMC3Q9Y6N6 1575 aa14.96□□□□□ -0.01
PCSK6-213ENST00000560902 BAZ1AQ9NRL2 1556 aaPredicted RBP14.89□□□□□ -0.03
PCSK6-213ENST00000560902 PEG3Q9GZU2 1588 aa14.87□□□□□ -0.03
PCSK6-213ENST00000560902 PDS5BQ9NTI5 1447 aa14.85□□□□□ -0.03
PCSK6-213ENST00000560902 MROH2BQ7Z745 1585 aa14.84□□□□□ -0.03
PCSK6-213ENST00000560902 MRC2Q9UBG0 1479 aa14.81□□□□□ -0.04
PCSK6-213ENST00000560902 WDR62O43379 1518 aa14.79□□□□□ -0.04
PCSK6-213ENST00000560902 CADPSQ9ULU8 1353 aa14.75□□□□□ -0.05
PCSK6-213ENST00000560902 WIZO95785 1651 aa14.68□□□□□ -0.06
PCSK6-213ENST00000560902 CEP164Q9UPV0 1460 aa14.67□□□□□ -0.06
PCSK6-213ENST00000560902 OSCARQ8IYS5 282 aa14.66□□□□□ -0.06
PCSK6-213ENST00000560902 FANCD2Q9BXW9 1451 aa14.63□□□□□ -0.07
PCSK6-213ENST00000560902 RIMBP3CA6NJZ7 1639 aa14.63□□□□□ -0.07
PCSK6-213ENST00000560902 RIMBP3BA6NNM3 1639 aa14.63□□□□□ -0.07
PCSK6-213ENST00000560902 RIMBP3Q9UFD9 1639 aa14.63□□□□□ -0.07
PCSK6-213ENST00000560902 URB2Q14146 1524 aaKnown RBP14.57□□□□□ -0.08
PCSK6-213ENST00000560902 ARHGEF11O15085 1522 aa14.51□□□□□ -0.09
PCSK6-213ENST00000560902 CFTRP13569 1480 aa14.5□□□□□ -0.09
PCSK6-213ENST00000560902 ZNF608Q9ULD9 1512 aaPredicted RBP14.48□□□□□ -0.09
PCSK6-213ENST00000560902 CYB5RLQ6IPT4 315 aa14.43□□□□□ -0.1
PCSK6-213ENST00000560902 PRDM2Q13029 1718 aa14.4□□□□□ -0.1
PCSK6-213ENST00000560902 TRHP20396 242 aaPredicted RBP14.39□□□□□ -0.11
PCSK6-213ENST00000560902 TOP2AP11388 1531 aaKnown RBP14.38□□□□□ -0.11
PCSK6-213ENST00000560902 CHD1O14646 1710 aa14.38□□□□□ -0.11
PCSK6-213ENST00000560902 EIF4G3O43432 1585 aaKnown RBP14.37□□□□□ -0.11
PCSK6-213ENST00000560902 ARAP1Q96P48 1450 aa14.36□□□□□ -0.11
PCSK6-213ENST00000560902 IFT140Q96RY7 1462 aa14.36□□□□□ -0.11
PCSK6-213ENST00000560902 RSF1Q96T23 1441 aaPredicted RBP14.34□□□□□ -0.11
PCSK6-213ENST00000560902 TOPBP1Q92547 1522 aa14.32□□□□□ -0.12
PCSK6-213ENST00000560902 AQRO60306 1485 aaKnown RBP eCLIP14.28□□□□□ -0.127e-7■□□□□ 8.1
PCSK6-213ENST00000560902 FBLN2P98095 1184 aa14.26□□□□□ -0.13
PCSK6-213ENST00000560902 TARBP1Q13395 1621 aaKnown RBP14.24□□□□□ -0.13
PCSK6-213ENST00000560902 CCDC88BA6NC98 1476 aa14.24□□□□□ -0.13
PCSK6-213ENST00000560902 AEBP2Q6ZN18 517 aaPredicted RBP14.23□□□□□ -0.13
PCSK6-213ENST00000560902 DNMBPQ6XZF7 1577 aa14.22□□□□□ -0.13
PCSK6-213ENST00000560902 RAD54L2Q9Y4B4 1467 aa14.16□□□□□ -0.14
PCSK6-213ENST00000560902 POLA1P09884 1462 aaPredicted RBP14.15□□□□□ -0.14
PCSK6-213ENST00000560902 ABCC8Q09428 1581 aa14.14□□□□□ -0.15
PCSK6-213ENST00000560902 CLASP1Q7Z460 1538 aa14.13□□□□□ -0.15
PCSK6-213ENST00000560902 TDRD9Q8NDG6 1382 aaKnown RBP14.12□□□□□ -0.15
PCSK6-213ENST00000560902 SNAPC4Q5SXM2 1469 aa14.12□□□□□ -0.15
PCSK6-213ENST00000560902 SOGA1O94964 1423 aa14.05□□□□□ -0.16
PCSK6-213ENST00000560902 SYNJ1O43426 1573 aa14.05□□□□□ -0.16
PCSK6-213ENST00000560902 FGD5Q6ZNL6 1462 aa14.02□□□□□ -0.16
PCSK6-213ENST00000560902 CHMP7Q8WUX9 453 aaPredicted RBP14.02□□□□□ -0.17
PCSK6-213ENST00000560902 GAPVD1Q14C86 1478 aa14□□□□□ -0.17
PCSK6-213ENST00000560902 ERCC6L2Q5T890 1561 aa13.98□□□□□ -0.17
PCSK6-213ENST00000560902 MAGI1Q96QZ7 1491 aaPredicted RBP13.98□□□□□ -0.17
PCSK6-213ENST00000560902 PBRM1Q86U86 1689 aa13.97□□□□□ -0.17
PCSK6-213ENST00000560902 CUX1P39880 1505 aa13.96□□□□□ -0.17
PCSK6-213ENST00000560902 SYNJ2O15056 1496 aa13.96□□□□□ -0.17
PCSK6-213ENST00000560902 GRIN2BQ13224 1484 aa13.96□□□□□ -0.17
PCSK6-213ENST00000560902 WDR97A6NE52 1622 aa13.96□□□□□ -0.17
PCSK6-213ENST00000560902 KIF13AQ9H1H9 1805 aa13.89□□□□□ -0.19
PCSK6-213ENST00000560902 ABCA5Q8WWZ7 1642 aa13.85□□□□□ -0.19
PCSK6-213ENST00000560902 CEP170Q5SW79 1584 aa13.84□□□□□ -0.19
PCSK6-213ENST00000560902 GRIN2AQ12879 1464 aa13.81□□□□□ -0.2
PCSK6-213ENST00000560902 ABCA10Q8WWZ4 1543 aa13.78□□□□□ -0.2
PCSK6-213ENST00000560902 ADAMTS12P58397 1594 aa13.78□□□□□ -0.2
PCSK6-213ENST00000560902 SHROOM2Q13796 1616 aa13.77□□□□□ -0.21
PCSK6-213ENST00000560902 NUP160Q12769 1436 aa13.75□□□□□ -0.21
PCSK6-213ENST00000560902 ILDR1Q86SU0 546 aaPredicted RBP13.71□□□□□ -0.21
PCSK6-213ENST00000560902 KDM4FA0A1W2PPD8 638 aa13.7□□□□□ -0.22
PCSK6-213ENST00000560902 TSPOAP1O95153 1857 aa13.69□□□□□ -0.22
PCSK6-213ENST00000560902 PRG4Q92954 1404 aaPredicted RBP13.68□□□□□ -0.22
PCSK6-213ENST00000560902 FAM69CQ0P6D2 419 aa13.68□□□□□ -0.22
PCSK6-213ENST00000560902 SUPT5HO00267 1087 aaKnown RBP13.67□□□□□ -0.22
PCSK6-213ENST00000560902 DIP2BQ9P265 1576 aa13.66□□□□□ -0.22
PCSK6-213ENST00000560902 ABCC10Q5T3U5 1492 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms