RNA–Protein interactions for RNA: ENST00000519453.3

SORBS3-207, Transcript of sorbin and SH3 domain containing 3, humanhuman

TSL 4

Gene SORBS3, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORBS3-207ENST00000519453 NISCHQ9Y2I1 1504 aa39.06■■■■□ 3.84
SORBS3-207ENST00000519453 CCDC180Q9P1Z9 1646 aa35.1■■■■□ 3.21
SORBS3-207ENST00000519453 ABCC9O60706 1549 aa34.95■■■■□ 3.19
SORBS3-207ENST00000519453 RB1CC1Q8TDY2 1594 aa33.38■■■□□ 2.93
SORBS3-207ENST00000519453 NACADO15069 1562 aa33.19■■■□□ 2.9
SORBS3-207ENST00000519453 MYO15BQ96JP2 1530 aa32.86■■■□□ 2.85
SORBS3-207ENST00000519453 DNAJC5BQ9UF47 199 aa32.82■■■□□ 2.84
SORBS3-207ENST00000519453 DCAF8L2P0C7V8 631 aa32.67■■■□□ 2.82
SORBS3-207ENST00000519453 UNC13AQ9UPW8 1703 aa32.54■■■□□ 2.8
SORBS3-207ENST00000519453 PABPN1Q86U42 306 aaKnown RBP eCLIP32.48■■■□□ 2.791e-8■■■□□ 15.3
SORBS3-207ENST00000519453 BICRAQ9NZM4 1560 aa32.42■■■□□ 2.78
SORBS3-207ENST00000519453 ZCCHC6Q5VYS8 1495 aaKnown RBP32.42■■■□□ 2.78
SORBS3-207ENST00000519453 DCAF1Q9Y4B6 1507 aa32.39■■■□□ 2.78
SORBS3-207ENST00000519453 SHROOM4Q9ULL8 1493 aa32.15■■■□□ 2.74
SORBS3-207ENST00000519453 SCRIBQ14160 1630 aa31.83■■■□□ 2.69
SORBS3-207ENST00000519453 CC2D2AQ9P2K1 1620 aa31.64■■■□□ 2.65
SORBS3-207ENST00000519453 EIF4G1Q04637 1599 aaKnown RBP31.61■■■□□ 2.65
SORBS3-207ENST00000519453 CECR2Q9BXF3 1484 aa31.56■■■□□ 2.64
SORBS3-207ENST00000519453 NCAPD3P42695 1498 aa30.66■■■□□ 2.5
SORBS3-207ENST00000519453 ATAD2BQ9ULI0 1458 aa30.51■■■□□ 2.48
SORBS3-207ENST00000519453 SMARCA4P51532 1647 aa30.46■■■□□ 2.47
SORBS3-207ENST00000519453 SMARCA2P51531 1590 aa30.45■■■□□ 2.46
SORBS3-207ENST00000519453 HMGXB3Q12766 1538 aa30.44■■■□□ 2.46
SORBS3-207ENST00000519453 BAZ1AQ9NRL2 1556 aaPredicted RBP30.32■■■□□ 2.45
SORBS3-207ENST00000519453 CUX2O14529 1486 aa30.29■■■□□ 2.44
SORBS3-207ENST00000519453 PEG3Q9GZU2 1588 aa30.28■■■□□ 2.44
SORBS3-207ENST00000519453 DNAJC5Q9H3Z4 198 aa30.21■■■□□ 2.43
SORBS3-207ENST00000519453 ERCC6Q03468 1493 aa30.19■■■□□ 2.42
SORBS3-207ENST00000519453 BAZ1BQ9UIG0 1483 aaKnown RBP30.18■■■□□ 2.42
SORBS3-207ENST00000519453 MROH2BQ7Z745 1585 aa30.04■■■□□ 2.4
SORBS3-207ENST00000519453 NESP48681 1621 aa30.04■■■□□ 2.4
SORBS3-207ENST00000519453 LAMC3Q9Y6N6 1575 aa29.94■■■□□ 2.38
SORBS3-207ENST00000519453 THOC2Q8NI27 1593 aaKnown RBP29.84■■■□□ 2.37
SORBS3-207ENST00000519453 PDS5BQ9NTI5 1447 aa29.74■■■□□ 2.35
SORBS3-207ENST00000519453 CADPSQ9ULU8 1353 aa29.67■■■□□ 2.34
SORBS3-207ENST00000519453 KIF21AQ7Z4S6 1674 aa29.66■■■□□ 2.34
SORBS3-207ENST00000519453 WIZO95785 1651 aa29.63■■■□□ 2.33
SORBS3-207ENST00000519453 MRC2Q9UBG0 1479 aa29.48■■■□□ 2.31
SORBS3-207ENST00000519453 WDR62O43379 1518 aa29.46■■■□□ 2.31
SORBS3-207ENST00000519453 RSF1Q96T23 1441 aaPredicted RBP29.45■■■□□ 2.3
SORBS3-207ENST00000519453 CFTRP13569 1480 aa29.37■■■□□ 2.29
SORBS3-207ENST00000519453 TOP2AP11388 1531 aaKnown RBP29.35■■■□□ 2.29
SORBS3-207ENST00000519453 CEP164Q9UPV0 1460 aa29.34■■■□□ 2.29
SORBS3-207ENST00000519453 FANCD2Q9BXW9 1451 aa29.3■■■□□ 2.28
SORBS3-207ENST00000519453 URB2Q14146 1524 aaKnown RBP29.07■■■□□ 2.24
SORBS3-207ENST00000519453 PRDM2Q13029 1718 aa29.01■■■□□ 2.23
SORBS3-207ENST00000519453 CCDC88BA6NC98 1476 aa28.97■■■□□ 2.23
SORBS3-207ENST00000519453 IFT140Q96RY7 1462 aa28.78■■■□□ 2.2
SORBS3-207ENST00000519453 OSCARQ8IYS5 282 aa28.78■■■□□ 2.2
SORBS3-207ENST00000519453 TOPBP1Q92547 1522 aa28.75■■■□□ 2.19
SORBS3-207ENST00000519453 ABCC8Q09428 1581 aa28.75■■■□□ 2.19
SORBS3-207ENST00000519453 TRIM41Q8WV44 630 aa28.69■■■□□ 2.18
SORBS3-207ENST00000519453 ZNF608Q9ULD9 1512 aaPredicted RBP28.68■■■□□ 2.18
SORBS3-207ENST00000519453 DNMBPQ6XZF7 1577 aa28.67■■■□□ 2.18
SORBS3-207ENST00000519453 EIF4G3O43432 1585 aaKnown RBP28.55■■■□□ 2.16
SORBS3-207ENST00000519453 TARBP1Q13395 1621 aaKnown RBP28.53■■■□□ 2.16
SORBS3-207ENST00000519453 POLA1P09884 1462 aaPredicted RBP28.47■■■□□ 2.15
SORBS3-207ENST00000519453 RIMBP3CA6NJZ7 1639 aa28.43■■■□□ 2.14
SORBS3-207ENST00000519453 RIMBP3BA6NNM3 1639 aa28.43■■■□□ 2.14
SORBS3-207ENST00000519453 RIMBP3Q9UFD9 1639 aa28.43■■■□□ 2.14
SORBS3-207ENST00000519453 AQRO60306 1485 aaKnown RBP eCLIP28.4■■■□□ 2.143e-7■■■□□ 15.6
SORBS3-207ENST00000519453 ARHGEF11O15085 1522 aa28.38■■■□□ 2.13
SORBS3-207ENST00000519453 WDR97A6NE52 1622 aa28.33■■■□□ 2.13
SORBS3-207ENST00000519453 RAD54L2Q9Y4B4 1467 aa28.29■■■□□ 2.12
SORBS3-207ENST00000519453 SOGA1O94964 1423 aa28.28■■■□□ 2.12
SORBS3-207ENST00000519453 CHD1O14646 1710 aa28.27■■■□□ 2.12
SORBS3-207ENST00000519453 FGD5Q6ZNL6 1462 aa28.26■■■□□ 2.11
SORBS3-207ENST00000519453 CUX1P39880 1505 aa28.24■■■□□ 2.11
SORBS3-207ENST00000519453 TDRD9Q8NDG6 1382 aaKnown RBP28.2■■■□□ 2.1
SORBS3-207ENST00000519453 MAGI1Q96QZ7 1491 aaPredicted RBP28.15■■■□□ 2.1
SORBS3-207ENST00000519453 SNAPC4Q5SXM2 1469 aa28.14■■■□□ 2.09
SORBS3-207ENST00000519453 GRIN2BQ13224 1484 aa28.09■■■□□ 2.09
SORBS3-207ENST00000519453 ARAP1Q96P48 1450 aa28.09■■■□□ 2.09
SORBS3-207ENST00000519453 FBLN2P98095 1184 aa28.08■■■□□ 2.09
SORBS3-207ENST00000519453 CLASP1Q7Z460 1538 aa28.08■■■□□ 2.08
SORBS3-207ENST00000519453 CYB5RLQ6IPT4 315 aa28.03■■■□□ 2.08
SORBS3-207ENST00000519453 SYNJ2O15056 1496 aa28.02■■■□□ 2.08
SORBS3-207ENST00000519453 SYNJ1O43426 1573 aa28.01■■■□□ 2.07
SORBS3-207ENST00000519453 ABCA10Q8WWZ4 1543 aa28.01■■■□□ 2.07
SORBS3-207ENST00000519453 GAPVD1Q14C86 1478 aa27.97■■■□□ 2.07
SORBS3-207ENST00000519453 CHMP7Q8WUX9 453 aaPredicted RBP27.97■■■□□ 2.07
SORBS3-207ENST00000519453 ABCA5Q8WWZ7 1642 aa27.95■■■□□ 2.06
SORBS3-207ENST00000519453 PBRM1Q86U86 1689 aa27.93■■■□□ 2.06
SORBS3-207ENST00000519453 SUPT5HO00267 1087 aaKnown RBP27.89■■■□□ 2.06
SORBS3-207ENST00000519453 WRNQ14191 1432 aaPredicted RBP eCLIP27.84■■■□□ 2.05
SORBS3-207ENST00000519453 TOP2BQ02880 1626 aa27.81■■■□□ 2.04
SORBS3-207ENST00000519453 BIVM-ERCC5R4GMW8 1640 aa27.81■■■□□ 2.04
SORBS3-207ENST00000519453 GRIN2AQ12879 1464 aa27.74■■■□□ 2.03
SORBS3-207ENST00000519453 ADAMTS12P58397 1594 aa27.73■■■□□ 2.03
SORBS3-207ENST00000519453 NUP160Q12769 1436 aa27.7■■■□□ 2.03
SORBS3-207ENST00000519453 TRHP20396 242 aaPredicted RBP27.67■■■□□ 2.02
SORBS3-207ENST00000519453 ERICH3Q5RHP9 1530 aa27.66■■■□□ 2.02
SORBS3-207ENST00000519453 FHAD1B1AJZ9 1412 aa27.65■■■□□ 2.02
SORBS3-207ENST00000519453 CEP170Q5SW79 1584 aa27.61■■■□□ 2.01
SORBS3-207ENST00000519453 SHROOM2Q13796 1616 aa27.57■■■□□ 2
SORBS3-207ENST00000519453 ERCC6L2Q5T890 1561 aa27.53■■■□□ 2
SORBS3-207ENST00000519453 RUSC2Q8N2Y8 1516 aa27.35■■□□□ 1.97
SORBS3-207ENST00000519453 PRG4Q92954 1404 aaPredicted RBP27.33■■□□□ 1.96
SORBS3-207ENST00000519453 JPH4Q96JJ6 628 aa27.3■■□□□ 1.96
SORBS3-207ENST00000519453 KIF27Q86VH2 1401 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms