RNA–Protein interactions for RNA: ENST00000612121.4

LTBP4-233, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 755 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-233ENST00000612121 NISCHQ9Y2I1 1504 aa39.68■■■■□ 3.94
LTBP4-233ENST00000612121 ABCC9O60706 1549 aa36.33■■■■□ 3.41
LTBP4-233ENST00000612121 CCDC180Q9P1Z9 1646 aa35.8■■■■□ 3.32
LTBP4-233ENST00000612121 DNAJC5BQ9UF47 199 aa34.61■■■■□ 3.13
LTBP4-233ENST00000612121 RB1CC1Q8TDY2 1594 aa34.34■■■■□ 3.09
LTBP4-233ENST00000612121 NACADO15069 1562 aa33.99■■■■□ 3.03
LTBP4-233ENST00000612121 PABPN1Q86U42 306 aaKnown RBP eCLIP33.76■■■□□ 2.99
LTBP4-233ENST00000612121 DCAF8L2P0C7V8 631 aa33.69■■■□□ 2.98
LTBP4-233ENST00000612121 UNC13AQ9UPW8 1703 aa33.57■■■□□ 2.96
LTBP4-233ENST00000612121 BICRAQ9NZM4 1560 aa33.4■■■□□ 2.94
LTBP4-233ENST00000612121 MYO15BQ96JP2 1530 aa33.38■■■□□ 2.93
LTBP4-233ENST00000612121 SHROOM4Q9ULL8 1493 aa32.86■■■□□ 2.85
LTBP4-233ENST00000612121 CC2D2AQ9P2K1 1620 aa32.8■■■□□ 2.84
LTBP4-233ENST00000612121 CECR2Q9BXF3 1484 aa32.79■■■□□ 2.84
LTBP4-233ENST00000612121 ZCCHC6Q5VYS8 1495 aaKnown RBP32.77■■■□□ 2.84
LTBP4-233ENST00000612121 DCAF1Q9Y4B6 1507 aa32.75■■■□□ 2.83
LTBP4-233ENST00000612121 EIF4G1Q04637 1599 aaKnown RBP32.6■■■□□ 2.81
LTBP4-233ENST00000612121 SCRIBQ14160 1630 aa32.59■■■□□ 2.81
LTBP4-233ENST00000612121 DNAJC5Q9H3Z4 198 aa32.14■■■□□ 2.74
LTBP4-233ENST00000612121 CUX2O14529 1486 aa31.52■■■□□ 2.64
LTBP4-233ENST00000612121 NCAPD3P42695 1498 aa31.41■■■□□ 2.62
LTBP4-233ENST00000612121 ERCC6Q03468 1493 aa31.38■■■□□ 2.61
LTBP4-233ENST00000612121 ATAD2BQ9ULI0 1458 aa31.24■■■□□ 2.59
LTBP4-233ENST00000612121 HMGXB3Q12766 1538 aa31.1■■■□□ 2.57
LTBP4-233ENST00000612121 SMARCA2P51531 1590 aa31.09■■■□□ 2.57
LTBP4-233ENST00000612121 NESP48681 1621 aa31.07■■■□□ 2.56
LTBP4-233ENST00000612121 SMARCA4P51532 1647 aa31.06■■■□□ 2.56
LTBP4-233ENST00000612121 BAZ1BQ9UIG0 1483 aaKnown RBP30.88■■■□□ 2.53
LTBP4-233ENST00000612121 THOC2Q8NI27 1593 aaKnown RBP30.85■■■□□ 2.53
LTBP4-233ENST00000612121 BAZ1AQ9NRL2 1556 aaPredicted RBP30.82■■■□□ 2.52
LTBP4-233ENST00000612121 PEG3Q9GZU2 1588 aa30.78■■■□□ 2.52
LTBP4-233ENST00000612121 LAMC3Q9Y6N6 1575 aa30.75■■■□□ 2.51
LTBP4-233ENST00000612121 KIF21AQ7Z4S6 1674 aa30.63■■■□□ 2.49
LTBP4-233ENST00000612121 PDS5BQ9NTI5 1447 aa30.6■■■□□ 2.49
LTBP4-233ENST00000612121 MROH2BQ7Z745 1585 aa30.58■■■□□ 2.49
LTBP4-233ENST00000612121 TRIM41Q8WV44 630 aa30.46■■■□□ 2.47
LTBP4-233ENST00000612121 CADPSQ9ULU8 1353 aa30.42■■■□□ 2.46
LTBP4-233ENST00000612121 MRC2Q9UBG0 1479 aa30.37■■■□□ 2.45
LTBP4-233ENST00000612121 WDR62O43379 1518 aa30.32■■■□□ 2.44
LTBP4-233ENST00000612121 WIZO95785 1651 aa30.17■■■□□ 2.42
LTBP4-233ENST00000612121 CEP164Q9UPV0 1460 aa30.12■■■□□ 2.41
LTBP4-233ENST00000612121 FANCD2Q9BXW9 1451 aa30.06■■■□□ 2.4
LTBP4-233ENST00000612121 OSCARQ8IYS5 282 aa30.01■■■□□ 2.39
LTBP4-233ENST00000612121 CFTRP13569 1480 aa29.97■■■□□ 2.39
LTBP4-233ENST00000612121 URB2Q14146 1524 aaKnown RBP29.86■■■□□ 2.37
LTBP4-233ENST00000612121 RSF1Q96T23 1441 aaPredicted RBP29.76■■■□□ 2.35
LTBP4-233ENST00000612121 TOP2AP11388 1531 aaKnown RBP29.74■■■□□ 2.35
LTBP4-233ENST00000612121 RIMBP3CA6NJZ7 1639 aa29.66■■■□□ 2.34
LTBP4-233ENST00000612121 RIMBP3BA6NNM3 1639 aa29.66■■■□□ 2.34
LTBP4-233ENST00000612121 RIMBP3Q9UFD9 1639 aa29.66■■■□□ 2.34
LTBP4-233ENST00000612121 PRDM2Q13029 1718 aa29.58■■■□□ 2.33
LTBP4-233ENST00000612121 ZNF608Q9ULD9 1512 aaPredicted RBP29.58■■■□□ 2.33
LTBP4-233ENST00000612121 IFT140Q96RY7 1462 aa29.56■■■□□ 2.32
LTBP4-233ENST00000612121 ARHGEF11O15085 1522 aa29.52■■■□□ 2.32
LTBP4-233ENST00000612121 TOPBP1Q92547 1522 aa29.45■■■□□ 2.3
LTBP4-233ENST00000612121 CCDC88BA6NC98 1476 aa29.43■■■□□ 2.3
LTBP4-233ENST00000612121 EIF4G3O43432 1585 aaKnown RBP29.36■■■□□ 2.29
LTBP4-233ENST00000612121 CYB5RLQ6IPT4 315 aa29.34■■■□□ 2.29
LTBP4-233ENST00000612121 ABCC8Q09428 1581 aa29.33■■■□□ 2.29
LTBP4-233ENST00000612121 DNMBPQ6XZF7 1577 aa29.27■■■□□ 2.28
LTBP4-233ENST00000612121 AQRO60306 1485 aaKnown RBP eCLIP29.25■■■□□ 2.271e-7■■■□□ 15.8
LTBP4-233ENST00000612121 CHD1O14646 1710 aa29.24■■■□□ 2.27
LTBP4-233ENST00000612121 TARBP1Q13395 1621 aaKnown RBP29.23■■■□□ 2.27
LTBP4-233ENST00000612121 ARAP1Q96P48 1450 aa29.2■■■□□ 2.26
LTBP4-233ENST00000612121 TRHP20396 242 aaPredicted RBP29.16■■■□□ 2.26
LTBP4-233ENST00000612121 FBLN2P98095 1184 aa29.13■■■□□ 2.25
LTBP4-233ENST00000612121 POLA1P09884 1462 aaPredicted RBP29.1■■■□□ 2.25
LTBP4-233ENST00000612121 RAD54L2Q9Y4B4 1467 aa29.02■■■□□ 2.24
LTBP4-233ENST00000612121 TDRD9Q8NDG6 1382 aaKnown RBP28.99■■■□□ 2.23
LTBP4-233ENST00000612121 SOGA1O94964 1423 aa28.97■■■□□ 2.23
LTBP4-233ENST00000612121 CLASP1Q7Z460 1538 aa28.92■■■□□ 2.22
LTBP4-233ENST00000612121 SNAPC4Q5SXM2 1469 aa28.91■■■□□ 2.22
LTBP4-233ENST00000612121 WDR97A6NE52 1622 aa28.87■■■□□ 2.21
LTBP4-233ENST00000612121 FGD5Q6ZNL6 1462 aa28.85■■■□□ 2.21
LTBP4-233ENST00000612121 CHMP7Q8WUX9 453 aaPredicted RBP28.84■■■□□ 2.21
LTBP4-233ENST00000612121 SYNJ1O43426 1573 aa28.83■■■□□ 2.21
LTBP4-233ENST00000612121 MAGI1Q96QZ7 1491 aaPredicted RBP28.82■■■□□ 2.2
LTBP4-233ENST00000612121 GRIN2BQ13224 1484 aa28.77■■■□□ 2.2
LTBP4-233ENST00000612121 CUX1P39880 1505 aa28.75■■■□□ 2.19
LTBP4-233ENST00000612121 SYNJ2O15056 1496 aa28.73■■■□□ 2.19
LTBP4-233ENST00000612121 AEBP2Q6ZN18 517 aaPredicted RBP28.67■■■□□ 2.18
LTBP4-233ENST00000612121 GAPVD1Q14C86 1478 aa28.64■■■□□ 2.17
LTBP4-233ENST00000612121 PBRM1Q86U86 1689 aa28.6■■■□□ 2.17
LTBP4-233ENST00000612121 ABCA10Q8WWZ4 1543 aa28.5■■■□□ 2.15
LTBP4-233ENST00000612121 ABCA5Q8WWZ7 1642 aa28.5■■■□□ 2.15
LTBP4-233ENST00000612121 ERCC6L2Q5T890 1561 aa28.44■■■□□ 2.14
LTBP4-233ENST00000612121 GRIN2AQ12879 1464 aa28.4■■■□□ 2.14
LTBP4-233ENST00000612121 NUP160Q12769 1436 aa28.35■■■□□ 2.13
LTBP4-233ENST00000612121 CEP170Q5SW79 1584 aa28.34■■■□□ 2.13
LTBP4-233ENST00000612121 ADAMTS12P58397 1594 aa28.31■■■□□ 2.12
LTBP4-233ENST00000612121 WRNQ14191 1432 aaPredicted RBP eCLIP28.27■■■□□ 2.12
LTBP4-233ENST00000612121 SHROOM2Q13796 1616 aa28.27■■■□□ 2.12
LTBP4-233ENST00000612121 FHAD1B1AJZ9 1412 aa28.22■■■□□ 2.11
LTBP4-233ENST00000612121 KIF13AQ9H1H9 1805 aa28.17■■■□□ 2.1
LTBP4-233ENST00000612121 TOP2BQ02880 1626 aa28.14■■■□□ 2.09
LTBP4-233ENST00000612121 BIVM-ERCC5R4GMW8 1640 aa28.14■■■□□ 2.09
LTBP4-233ENST00000612121 ERICH3Q5RHP9 1530 aa28.12■■■□□ 2.09
LTBP4-233ENST00000612121 PRG4Q92954 1404 aaPredicted RBP28.1■■■□□ 2.09
LTBP4-233ENST00000612121 JPH4Q96JJ6 628 aa28.05■■■□□ 2.08
LTBP4-233ENST00000612121 SUPT5HO00267 1087 aaKnown RBP28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms