RNA–Protein interactions for RNA: ENST00000523740.5

SORBS3-218, Transcript of sorbin and SH3 domain containing 3, humanhuman

TSL 3

Gene SORBS3, Length 983 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORBS3-218ENST00000523740 NISCHQ9Y2I1 1504 aa52.55■■■■■ 6
SORBS3-218ENST00000523740 ABCC9O60706 1549 aa48.07■■■■■ 5.29
SORBS3-218ENST00000523740 CCDC180Q9P1Z9 1646 aa47.57■■■■■ 5.21
SORBS3-218ENST00000523740 RB1CC1Q8TDY2 1594 aa45.56■■■■■ 4.88
SORBS3-218ENST00000523740 DNAJC5BQ9UF47 199 aa45.45■■■■■ 4.87
SORBS3-218ENST00000523740 NACADO15069 1562 aa45.06■■■■■ 4.8
SORBS3-218ENST00000523740 DCAF8L2P0C7V8 631 aa44.63■■■■■ 4.74
SORBS3-218ENST00000523740 PABPN1Q86U42 306 aaKnown RBP eCLIP44.57■■■■■ 4.731e-7■■■□□ 15.2
SORBS3-218ENST00000523740 UNC13AQ9UPW8 1703 aa44.55■■■■■ 4.72
SORBS3-218ENST00000523740 MYO15BQ96JP2 1530 aa44.18■■■■■ 4.66
SORBS3-218ENST00000523740 BICRAQ9NZM4 1560 aa44.14■■■■■ 4.66
SORBS3-218ENST00000523740 SHROOM4Q9ULL8 1493 aa43.59■■■■■ 4.57
SORBS3-218ENST00000523740 ZCCHC6Q5VYS8 1495 aaKnown RBP43.44■■■■■ 4.54
SORBS3-218ENST00000523740 CC2D2AQ9P2K1 1620 aa43.42■■■■■ 4.54
SORBS3-218ENST00000523740 DCAF1Q9Y4B6 1507 aa43.38■■■■■ 4.54
SORBS3-218ENST00000523740 CECR2Q9BXF3 1484 aa43.38■■■■■ 4.53
SORBS3-218ENST00000523740 SCRIBQ14160 1630 aa43.27■■■■■ 4.52
SORBS3-218ENST00000523740 EIF4G1Q04637 1599 aaKnown RBP43.17■■■■■ 4.5
SORBS3-218ENST00000523740 DNAJC5Q9H3Z4 198 aa42.3■■■■■ 4.36
SORBS3-218ENST00000523740 CUX2O14529 1486 aa41.74■■■■■ 4.27
SORBS3-218ENST00000523740 ERCC6Q03468 1493 aa41.64■■■■■ 4.26
SORBS3-218ENST00000523740 NCAPD3P42695 1498 aa41.51■■■■■ 4.24
SORBS3-218ENST00000523740 ATAD2BQ9ULI0 1458 aa41.31■■■■■ 4.2
SORBS3-218ENST00000523740 SMARCA2P51531 1590 aa41.26■■■■■ 4.2
SORBS3-218ENST00000523740 HMGXB3Q12766 1538 aa41.24■■■■■ 4.19
SORBS3-218ENST00000523740 SMARCA4P51532 1647 aa41.19■■■■■ 4.18
SORBS3-218ENST00000523740 NESP48681 1621 aa41.07■■■■■ 4.17
SORBS3-218ENST00000523740 BAZ1BQ9UIG0 1483 aaKnown RBP40.96■■■■■ 4.15
SORBS3-218ENST00000523740 BAZ1AQ9NRL2 1556 aaPredicted RBP40.9■■■■■ 4.14
SORBS3-218ENST00000523740 THOC2Q8NI27 1593 aaKnown RBP40.87■■■■■ 4.13
SORBS3-218ENST00000523740 LAMC3Q9Y6N6 1575 aa40.78■■■■■ 4.12
SORBS3-218ENST00000523740 PEG3Q9GZU2 1588 aa40.76■■■■■ 4.12
SORBS3-218ENST00000523740 KIF21AQ7Z4S6 1674 aa40.66■■■■■ 4.1
SORBS3-218ENST00000523740 PDS5BQ9NTI5 1447 aa40.54■■■■■ 4.08
SORBS3-218ENST00000523740 MROH2BQ7Z745 1585 aa40.45■■■■■ 4.07
SORBS3-218ENST00000523740 TRIM41Q8WV44 630 aa40.28■■■■■ 4.04
SORBS3-218ENST00000523740 MRC2Q9UBG0 1479 aa40.24■■■■■ 4.03
SORBS3-218ENST00000523740 CADPSQ9ULU8 1353 aa40.23■■■■■ 4.03
SORBS3-218ENST00000523740 WDR62O43379 1518 aa40.16■■■■■ 4.02
SORBS3-218ENST00000523740 WIZO95785 1651 aa40.01■■■■■ 4
SORBS3-218ENST00000523740 CEP164Q9UPV0 1460 aa39.97■■■■□ 3.99
SORBS3-218ENST00000523740 FANCD2Q9BXW9 1451 aa39.82■■■■□ 3.97
SORBS3-218ENST00000523740 OSCARQ8IYS5 282 aa39.66■■■■□ 3.94
SORBS3-218ENST00000523740 CFTRP13569 1480 aa39.65■■■■□ 3.94
SORBS3-218ENST00000523740 URB2Q14146 1524 aaKnown RBP39.5■■■■□ 3.91
SORBS3-218ENST00000523740 TOP2AP11388 1531 aaKnown RBP39.48■■■■□ 3.91
SORBS3-218ENST00000523740 PRDM2Q13029 1718 aa39.42■■■■□ 3.9
SORBS3-218ENST00000523740 RSF1Q96T23 1441 aaPredicted RBP39.36■■■■□ 3.89
SORBS3-218ENST00000523740 RIMBP3CA6NJZ7 1639 aa39.29■■■■□ 3.88
SORBS3-218ENST00000523740 RIMBP3BA6NNM3 1639 aa39.29■■■■□ 3.88
SORBS3-218ENST00000523740 RIMBP3Q9UFD9 1639 aa39.29■■■■□ 3.88
SORBS3-218ENST00000523740 IFT140Q96RY7 1462 aa39.17■■■■□ 3.86
SORBS3-218ENST00000523740 ZNF608Q9ULD9 1512 aaPredicted RBP39.1■■■■□ 3.85
SORBS3-218ENST00000523740 ARHGEF11O15085 1522 aa39.07■■■■□ 3.84
SORBS3-218ENST00000523740 TOPBP1Q92547 1522 aa38.99■■■■□ 3.83
SORBS3-218ENST00000523740 EIF4G3O43432 1585 aaKnown RBP38.97■■■■□ 3.83
SORBS3-218ENST00000523740 CCDC88BA6NC98 1476 aa38.95■■■■□ 3.83
SORBS3-218ENST00000523740 ABCC8Q09428 1581 aa38.91■■■■□ 3.82
SORBS3-218ENST00000523740 DNMBPQ6XZF7 1577 aa38.85■■■■□ 3.81
SORBS3-218ENST00000523740 CHD1O14646 1710 aa38.84■■■■□ 3.81
SORBS3-218ENST00000523740 CYB5RLQ6IPT4 315 aa38.76■■■■□ 3.8
SORBS3-218ENST00000523740 TARBP1Q13395 1621 aaKnown RBP38.7■■■■□ 3.79
SORBS3-218ENST00000523740 AQRO60306 1485 aaKnown RBP eCLIP38.66■■■■□ 3.788e-7■■■□□ 16.1
SORBS3-218ENST00000523740 ARAP1Q96P48 1450 aa38.61■■■■□ 3.77
SORBS3-218ENST00000523740 TRHP20396 242 aaPredicted RBP38.61■■■■□ 3.77
SORBS3-218ENST00000523740 FBLN2P98095 1184 aa38.6■■■■□ 3.77
SORBS3-218ENST00000523740 POLA1P09884 1462 aaPredicted RBP38.54■■■■□ 3.76
SORBS3-218ENST00000523740 RAD54L2Q9Y4B4 1467 aa38.39■■■■□ 3.74
SORBS3-218ENST00000523740 WDR97A6NE52 1622 aa38.36■■■■□ 3.73
SORBS3-218ENST00000523740 SOGA1O94964 1423 aa38.35■■■■□ 3.73
SORBS3-218ENST00000523740 SNAPC4Q5SXM2 1469 aa38.33■■■■□ 3.73
SORBS3-218ENST00000523740 TDRD9Q8NDG6 1382 aaKnown RBP38.32■■■■□ 3.73
SORBS3-218ENST00000523740 SYNJ1O43426 1573 aa38.29■■■■□ 3.72
SORBS3-218ENST00000523740 CLASP1Q7Z460 1538 aa38.28■■■■□ 3.72
SORBS3-218ENST00000523740 FGD5Q6ZNL6 1462 aa38.24■■■■□ 3.71
SORBS3-218ENST00000523740 MAGI1Q96QZ7 1491 aaPredicted RBP38.22■■■■□ 3.71
SORBS3-218ENST00000523740 CHMP7Q8WUX9 453 aaPredicted RBP38.21■■■■□ 3.71
SORBS3-218ENST00000523740 GRIN2BQ13224 1484 aa38.13■■■■□ 3.69
SORBS3-218ENST00000523740 SYNJ2O15056 1496 aa38.09■■■■□ 3.69
SORBS3-218ENST00000523740 CUX1P39880 1505 aa38.07■■■■□ 3.69
SORBS3-218ENST00000523740 PBRM1Q86U86 1689 aa38.04■■■■□ 3.68
SORBS3-218ENST00000523740 AEBP2Q6ZN18 517 aaPredicted RBP38.01■■■■□ 3.68
SORBS3-218ENST00000523740 GAPVD1Q14C86 1478 aa37.92■■■■□ 3.66
SORBS3-218ENST00000523740 ABCA5Q8WWZ7 1642 aa37.79■■■■□ 3.64
SORBS3-218ENST00000523740 ABCA10Q8WWZ4 1543 aa37.76■■■■□ 3.63
SORBS3-218ENST00000523740 GRIN2AQ12879 1464 aa37.64■■■■□ 3.62
SORBS3-218ENST00000523740 ERCC6L2Q5T890 1561 aa37.59■■■■□ 3.61
SORBS3-218ENST00000523740 ADAMTS12P58397 1594 aa37.59■■■■□ 3.61
SORBS3-218ENST00000523740 CEP170Q5SW79 1584 aa37.55■■■■□ 3.6
SORBS3-218ENST00000523740 NUP160Q12769 1436 aa37.5■■■■□ 3.59
SORBS3-218ENST00000523740 WRNQ14191 1432 aaPredicted RBP eCLIP37.5■■■■□ 3.59
SORBS3-218ENST00000523740 SHROOM2Q13796 1616 aa37.46■■■■□ 3.59
SORBS3-218ENST00000523740 FHAD1B1AJZ9 1412 aa37.39■■■■□ 3.58
SORBS3-218ENST00000523740 BIVM-ERCC5R4GMW8 1640 aa37.38■■■■□ 3.57
SORBS3-218ENST00000523740 KIF13AQ9H1H9 1805 aa37.36■■■■□ 3.57
SORBS3-218ENST00000523740 TOP2BQ02880 1626 aa37.35■■■■□ 3.57
SORBS3-218ENST00000523740 ERICH3Q5RHP9 1530 aa37.31■■■■□ 3.56
SORBS3-218ENST00000523740 PRG4Q92954 1404 aaPredicted RBP37.2■■■■□ 3.55
SORBS3-218ENST00000523740 SUPT5HO00267 1087 aaKnown RBP37.19■■■■□ 3.54
SORBS3-218ENST00000523740 JPH4Q96JJ6 628 aa37.07■■■■□ 3.52
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms