RNA–Protein interactions for RNA: ENST00000308370.11

LTBP4-203, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LTBP4, Length 4,948 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-203ENST00000308370 NISCHQ9Y2I1 1504 aa32.17■■■□□ 2.74
LTBP4-203ENST00000308370 DCAF8L2P0C7V8 631 aa31.28■■■□□ 2.6
LTBP4-203ENST00000308370 SUPT5HO00267 1087 aaKnown RBP29.84■■■□□ 2.37
LTBP4-203ENST00000308370 SHROOM4Q9ULL8 1493 aa29.73■■■□□ 2.35
LTBP4-203ENST00000308370 PELP1Q8IZL8 1130 aaKnown RBP28.51■■■□□ 2.15
LTBP4-203ENST00000308370 EHMT2Q96KQ7 1210 aa28.31■■■□□ 2.12
LTBP4-203ENST00000308370 FAM9AQ8IZU1 332 aaPredicted RBP27.96■■■□□ 2.07
LTBP4-203ENST00000308370 TRIM41Q8WV44 630 aa27.74■■■□□ 2.03
LTBP4-203ENST00000308370 APLP2Q06481 763 aa27.61■■■□□ 2.01
LTBP4-203ENST00000308370 MYT1Q01538 1121 aa27.47■■□□□ 1.99
LTBP4-203ENST00000308370 PCGF6Q9BYE7 350 aa27.45■■□□□ 1.98
LTBP4-203ENST00000308370 TTBK1Q5TCY1 1321 aaPredicted RBP27.29■■□□□ 1.96
LTBP4-203ENST00000308370 ABCC9O60706 1549 aa27.27■■□□□ 1.96
LTBP4-203ENST00000308370 ERICH6Q7L0X2 663 aa27.22■■□□□ 1.95
LTBP4-203ENST00000308370 RANGAP1P46060 587 aaPredicted RBP27.19■■□□□ 1.94
LTBP4-203ENST00000308370 CCER1Q8TC90 406 aaPredicted RBP27.15■■□□□ 1.94
LTBP4-203ENST00000308370 UBTFP17480 764 aaKnown RBP27.15■■□□□ 1.94
LTBP4-203ENST00000308370 CHIC1Q5VXU3 224 aa27.13■■□□□ 1.93
LTBP4-203ENST00000308370 CENPBP07199 599 aaPredicted RBP27.1■■□□□ 1.93
LTBP4-203ENST00000308370 PABPN1Q86U42 306 aaKnown RBP eCLIP26.81■■□□□ 1.88
LTBP4-203ENST00000308370 LOC105371045A0A1W2PR82 267 aa26.81■■□□□ 1.88
LTBP4-203ENST00000308370 ATP1B4Q9UN42 357 aaPredicted RBP26.8■■□□□ 1.88
LTBP4-203ENST00000308370 ZEB1P37275 1124 aaPredicted RBP26.78■■□□□ 1.88
LTBP4-203ENST00000308370 ZCCHC6Q5VYS8 1495 aaKnown RBP26.74■■□□□ 1.87
LTBP4-203ENST00000308370 PPARGC1BQ86YN6 1023 aaKnown RBP26.67■■□□□ 1.86
LTBP4-203ENST00000308370 CCDC180Q9P1Z9 1646 aa26.65■■□□□ 1.86
LTBP4-203ENST00000308370 TRIM26Q12899 539 aaPredicted RBP26.6■■□□□ 1.85
LTBP4-203ENST00000308370 NEFLP07196 543 aa26.41■■□□□ 1.82
LTBP4-203ENST00000308370 SCRIBQ14160 1630 aa26.3■■□□□ 1.8
LTBP4-203ENST00000308370 HRCP23327 699 aa26.2■■□□□ 1.79
LTBP4-203ENST00000308370 ITGAEP38570 1179 aa26.06■■□□□ 1.76
LTBP4-203ENST00000308370 HNRNPUL2Q1KMD3 747 aaKnown RBP26.03■■□□□ 1.76
LTBP4-203ENST00000308370 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.97■■□□□ 1.75
LTBP4-203ENST00000308370 YTHDC1Q96MU7 727 aaKnown RBP25.97■■□□□ 1.75
LTBP4-203ENST00000308370 CSRNP3Q8WYN3 585 aa25.82■■□□□ 1.72
LTBP4-203ENST00000308370 DAXXQ9UER7 740 aaPredicted RBP25.8■■□□□ 1.72
LTBP4-203ENST00000308370 RB1CC1Q8TDY2 1594 aa25.79■■□□□ 1.72
LTBP4-203ENST00000308370 NACADO15069 1562 aa25.71■■□□□ 1.71
LTBP4-203ENST00000308370 DCAF1Q9Y4B6 1507 aa25.65■■□□□ 1.7
LTBP4-203ENST00000308370 RSF1Q96T23 1441 aaPredicted RBP25.65■■□□□ 1.7
LTBP4-203ENST00000308370 FAM50AQ14320 339 aaKnown RBP25.57■■□□□ 1.68
LTBP4-203ENST00000308370 MYT1LQ9UL68 1186 aa25.52■■□□□ 1.68
LTBP4-203ENST00000308370 RTL5Q5HYW3 569 aaPredicted RBP25.44■■□□□ 1.66
LTBP4-203ENST00000308370 FBLN2P98095 1184 aa25.39■■□□□ 1.66
LTBP4-203ENST00000308370 P3H3Q8IVL6 736 aa25.38■■□□□ 1.65
LTBP4-203ENST00000308370 POLR3GLQ9BT43 218 aa25.3■■□□□ 1.64
LTBP4-203ENST00000308370 DIEXFQ68CQ4 756 aaKnown RBP25.28■■□□□ 1.64
LTBP4-203ENST00000308370 TRIM52Q96A61 297 aa25.25■■□□□ 1.63
LTBP4-203ENST00000308370 CECR2Q9BXF3 1484 aa25.23■■□□□ 1.63
LTBP4-203ENST00000308370 MYO15BQ96JP2 1530 aa25.2■■□□□ 1.62
LTBP4-203ENST00000308370 NEUROD1Q13562 356 aa25.19■■□□□ 1.62
LTBP4-203ENST00000308370 BAZ1AQ9NRL2 1556 aaPredicted RBP25.18■■□□□ 1.62
LTBP4-203ENST00000308370 BAZ1BQ9UIG0 1483 aaKnown RBP25.13■■□□□ 1.61
LTBP4-203ENST00000308370 ZNF316A6NFI3 1004 aaPredicted RBP25.11■■□□□ 1.61
LTBP4-203ENST00000308370 ARID3CA6NKF2 412 aa25.11■■□□□ 1.61
LTBP4-203ENST00000308370 CNGB1Q14028 1251 aaPredicted RBP25.04■■□□□ 1.6
LTBP4-203ENST00000308370 WRNQ14191 1432 aaPredicted RBP eCLIP25.04■■□□□ 1.6
LTBP4-203ENST00000308370 EEA1Q15075 1411 aa25.02■■□□□ 1.6
LTBP4-203ENST00000308370 CDK11AQ9UQ88 783 aaPredicted RBP24.95■■□□□ 1.59
LTBP4-203ENST00000308370 CLIP1P30622 1438 aa24.94■■□□□ 1.58
LTBP4-203ENST00000308370 MROH2BQ7Z745 1585 aa24.93■■□□□ 1.58
LTBP4-203ENST00000308370 CLSPNQ9HAW4 1339 aa24.89■■□□□ 1.58
LTBP4-203ENST00000308370 GOLGA3Q08378 1498 aa24.87■■□□□ 1.57
LTBP4-203ENST00000308370 ZNF777Q9ULD5 760 aaPredicted RBP24.85■■□□□ 1.57
LTBP4-203ENST00000308370 CEP162Q5TB80 1403 aa24.83■■□□□ 1.57
LTBP4-203ENST00000308370 ZNF326Q5BKZ1 582 aaKnown RBP24.82■■□□□ 1.56
LTBP4-203ENST00000308370 KIF27Q86VH2 1401 aa24.75■■□□□ 1.55
LTBP4-203ENST00000308370 TNIKQ9UKE5 1360 aa24.75■■□□□ 1.55
LTBP4-203ENST00000308370 SLC4A1APQ9BWU0 796 aaKnown RBP24.71■■□□□ 1.55
LTBP4-203ENST00000308370 CCDC88BA6NC98 1476 aa24.71■■□□□ 1.55
LTBP4-203ENST00000308370 CEP164Q9UPV0 1460 aa24.7■■□□□ 1.54
LTBP4-203ENST00000308370 ANP32CO43423 234 aa24.7■■□□□ 1.54
LTBP4-203ENST00000308370 CHMP7Q8WUX9 453 aaPredicted RBP24.67■■□□□ 1.54
LTBP4-203ENST00000308370 GTF3C3Q9Y5Q9 886 aa24.67■■□□□ 1.54
LTBP4-203ENST00000308370 MTUS2Q5JR59 1369 aa24.65■■□□□ 1.54
LTBP4-203ENST00000308370 SOGA1O94964 1423 aa24.6■■□□□ 1.53
LTBP4-203ENST00000308370 SMARCA2P51531 1590 aa24.57■■□□□ 1.52
LTBP4-203ENST00000308370 CHIC2Q9UKJ5 165 aa24.57■■□□□ 1.52
LTBP4-203ENST00000308370 TONSLQ96HA7 1378 aa24.55■■□□□ 1.52
LTBP4-203ENST00000308370 WIZO95785 1651 aa24.55■■□□□ 1.52
LTBP4-203ENST00000308370 TOP2AP11388 1531 aaKnown RBP24.49■■□□□ 1.51
LTBP4-203ENST00000308370 ABCC8Q09428 1581 aa24.49■■□□□ 1.51
LTBP4-203ENST00000308370 BCANQ96GW7 911 aa24.47■■□□□ 1.51
LTBP4-203ENST00000308370 NPM1P06748 294 aaKnown RBP eCLIP24.42■■□□□ 1.5
LTBP4-203ENST00000308370 GLIPR1L2Q4G1C9 344 aa24.41■■□□□ 1.5
LTBP4-203ENST00000308370 CUX2O14529 1486 aa24.41■■□□□ 1.5
LTBP4-203ENST00000308370 EIF5BO60841 1220 aaKnown RBP24.4■■□□□ 1.5
LTBP4-203ENST00000308370 TSPY4P0CV99 314 aa24.39■■□□□ 1.49
LTBP4-203ENST00000308370 TSPY10P0CW01 314 aa24.39■■□□□ 1.49
LTBP4-203ENST00000308370 CARMIL1Q5VZK9 1371 aa24.38■■□□□ 1.49
LTBP4-203ENST00000308370 ACIN1Q9UKV3 1341 aaKnown RBP24.33■■□□□ 1.49
LTBP4-203ENST00000308370 ATAD2BQ9ULI0 1458 aa24.33■■□□□ 1.49
LTBP4-203ENST00000308370 SMARCA4P51532 1647 aa24.33■■□□□ 1.48
LTBP4-203ENST00000308370 ANP32AP39687 249 aaKnown RBP24.3■■□□□ 1.48
LTBP4-203ENST00000308370 RRP7BPQ9NSQ0 103 aa24.3■■□□□ 1.48
LTBP4-203ENST00000308370 DDX10Q13206 875 aaKnown RBP24.3■■□□□ 1.48
LTBP4-203ENST00000308370 ERCC6Q03468 1493 aa24.29■■□□□ 1.48
LTBP4-203ENST00000308370 PLEKHD1A6NEE1 506 aa24.29■■□□□ 1.48
LTBP4-203ENST00000308370 ZBTB47Q9UFB7 747 aaPredicted RBP24.26■■□□□ 1.47
LTBP4-203ENST00000308370 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms