RNA–Protein interactions for RNA: ENST00000522315.5

SORBS3-214, Transcript of sorbin and SH3 domain containing 3, humanhuman

TSL 4

Gene SORBS3, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORBS3-214ENST00000522315 NISCHQ9Y2I1 1504 aa45.1■■■■■ 4.81
SORBS3-214ENST00000522315 CCDC180Q9P1Z9 1646 aa40.39■■■■■ 4.06
SORBS3-214ENST00000522315 ABCC9O60706 1549 aa40.33■■■■■ 4.05
SORBS3-214ENST00000522315 RB1CC1Q8TDY2 1594 aa38.33■■■■□ 3.73
SORBS3-214ENST00000522315 NACADO15069 1562 aa38.07■■■■□ 3.69
SORBS3-214ENST00000522315 DCAF8L2P0C7V8 631 aa38■■■■□ 3.67
SORBS3-214ENST00000522315 DNAJC5BQ9UF47 199 aa37.66■■■■□ 3.62
SORBS3-214ENST00000522315 UNC13AQ9UPW8 1703 aa37.65■■■■□ 3.62
SORBS3-214ENST00000522315 PABPN1Q86U42 306 aaKnown RBP eCLIP37.55■■■■□ 3.63e-8■■□□□ 12
SORBS3-214ENST00000522315 MYO15BQ96JP2 1530 aa37.53■■■■□ 3.6
SORBS3-214ENST00000522315 ZCCHC6Q5VYS8 1495 aaKnown RBP37.45■■■■□ 3.59
SORBS3-214ENST00000522315 BICRAQ9NZM4 1560 aa37.33■■■■□ 3.57
SORBS3-214ENST00000522315 DCAF1Q9Y4B6 1507 aa37.15■■■■□ 3.54
SORBS3-214ENST00000522315 SCRIBQ14160 1630 aa36.97■■■■□ 3.51
SORBS3-214ENST00000522315 SHROOM4Q9ULL8 1493 aa36.61■■■■□ 3.45
SORBS3-214ENST00000522315 CC2D2AQ9P2K1 1620 aa36.41■■■■□ 3.42
SORBS3-214ENST00000522315 EIF4G1Q04637 1599 aaKnown RBP36.36■■■■□ 3.41
SORBS3-214ENST00000522315 CECR2Q9BXF3 1484 aa36.24■■■■□ 3.39
SORBS3-214ENST00000522315 SMARCA4P51532 1647 aa35.2■■■■□ 3.23
SORBS3-214ENST00000522315 NCAPD3P42695 1498 aa35.13■■■■□ 3.21
SORBS3-214ENST00000522315 ATAD2BQ9ULI0 1458 aa35.13■■■■□ 3.21
SORBS3-214ENST00000522315 SMARCA2P51531 1590 aa35■■■■□ 3.19
SORBS3-214ENST00000522315 BAZ1AQ9NRL2 1556 aaPredicted RBP34.96■■■■□ 3.19
SORBS3-214ENST00000522315 HMGXB3Q12766 1538 aa34.95■■■■□ 3.19
SORBS3-214ENST00000522315 MROH2BQ7Z745 1585 aa34.83■■■■□ 3.17
SORBS3-214ENST00000522315 BAZ1BQ9UIG0 1483 aaKnown RBP34.81■■■■□ 3.16
SORBS3-214ENST00000522315 PEG3Q9GZU2 1588 aa34.76■■■■□ 3.16
SORBS3-214ENST00000522315 NESP48681 1621 aa34.73■■■■□ 3.15
SORBS3-214ENST00000522315 ERCC6Q03468 1493 aa34.73■■■■□ 3.15
SORBS3-214ENST00000522315 CUX2O14529 1486 aa34.52■■■■□ 3.12
SORBS3-214ENST00000522315 WIZO95785 1651 aa34.47■■■■□ 3.11
SORBS3-214ENST00000522315 LAMC3Q9Y6N6 1575 aa34.36■■■■□ 3.09
SORBS3-214ENST00000522315 THOC2Q8NI27 1593 aaKnown RBP34.32■■■■□ 3.09
SORBS3-214ENST00000522315 KIF21AQ7Z4S6 1674 aa34.31■■■■□ 3.08
SORBS3-214ENST00000522315 DNAJC5Q9H3Z4 198 aa34.28■■■■□ 3.08
SORBS3-214ENST00000522315 RSF1Q96T23 1441 aaPredicted RBP34.1■■■■□ 3.05
SORBS3-214ENST00000522315 PDS5BQ9NTI5 1447 aa34.09■■■■□ 3.05
SORBS3-214ENST00000522315 CADPSQ9ULU8 1353 aa34.09■■■■□ 3.05
SORBS3-214ENST00000522315 TOP2AP11388 1531 aaKnown RBP33.96■■■■□ 3.03
SORBS3-214ENST00000522315 MRC2Q9UBG0 1479 aa33.89■■■■□ 3.02
SORBS3-214ENST00000522315 WDR62O43379 1518 aa33.82■■■■□ 3
SORBS3-214ENST00000522315 CEP164Q9UPV0 1460 aa33.79■■■■□ 3
SORBS3-214ENST00000522315 FANCD2Q9BXW9 1451 aa33.78■■■■□ 3
SORBS3-214ENST00000522315 CFTRP13569 1480 aa33.76■■■■□ 3
SORBS3-214ENST00000522315 CCDC88BA6NC98 1476 aa33.56■■■□□ 2.96
SORBS3-214ENST00000522315 URB2Q14146 1524 aaKnown RBP33.55■■■□□ 2.96
SORBS3-214ENST00000522315 PRDM2Q13029 1718 aa33.54■■■□□ 2.96
SORBS3-214ENST00000522315 TOPBP1Q92547 1522 aa33.18■■■□□ 2.9
SORBS3-214ENST00000522315 ZNF608Q9ULD9 1512 aaPredicted RBP33.13■■■□□ 2.89
SORBS3-214ENST00000522315 IFT140Q96RY7 1462 aa33.06■■■□□ 2.88
SORBS3-214ENST00000522315 DNMBPQ6XZF7 1577 aa33.06■■■□□ 2.88
SORBS3-214ENST00000522315 TRIM41Q8WV44 630 aa33.01■■■□□ 2.87
SORBS3-214ENST00000522315 EIF4G3O43432 1585 aaKnown RBP32.97■■■□□ 2.87
SORBS3-214ENST00000522315 ABCC8Q09428 1581 aa32.93■■■□□ 2.86
SORBS3-214ENST00000522315 OSCARQ8IYS5 282 aa32.92■■■□□ 2.86
SORBS3-214ENST00000522315 TARBP1Q13395 1621 aaKnown RBP32.89■■■□□ 2.86
SORBS3-214ENST00000522315 POLA1P09884 1462 aaPredicted RBP32.86■■■□□ 2.85
SORBS3-214ENST00000522315 AQRO60306 1485 aaKnown RBP eCLIP32.81■■■□□ 2.841e-7■■■□□ 14.8
SORBS3-214ENST00000522315 RAD54L2Q9Y4B4 1467 aa32.79■■■□□ 2.84
SORBS3-214ENST00000522315 SUPT5HO00267 1087 aaKnown RBP32.78■■■□□ 2.84
SORBS3-214ENST00000522315 CHD1O14646 1710 aa32.72■■■□□ 2.83
SORBS3-214ENST00000522315 CUX1P39880 1505 aa32.72■■■□□ 2.83
SORBS3-214ENST00000522315 FGD5Q6ZNL6 1462 aa32.7■■■□□ 2.83
SORBS3-214ENST00000522315 RIMBP3CA6NJZ7 1639 aa32.69■■■□□ 2.82
SORBS3-214ENST00000522315 RIMBP3BA6NNM3 1639 aa32.69■■■□□ 2.82
SORBS3-214ENST00000522315 RIMBP3Q9UFD9 1639 aa32.69■■■□□ 2.82
SORBS3-214ENST00000522315 SOGA1O94964 1423 aa32.64■■■□□ 2.82
SORBS3-214ENST00000522315 TDRD9Q8NDG6 1382 aaKnown RBP32.62■■■□□ 2.81
SORBS3-214ENST00000522315 ARHGEF11O15085 1522 aa32.56■■■□□ 2.8
SORBS3-214ENST00000522315 FBLN2P98095 1184 aa32.52■■■□□ 2.8
SORBS3-214ENST00000522315 WDR97A6NE52 1622 aa32.51■■■□□ 2.79
SORBS3-214ENST00000522315 SNAPC4Q5SXM2 1469 aa32.5■■■□□ 2.79
SORBS3-214ENST00000522315 PBRM1Q86U86 1689 aa32.37■■■□□ 2.77
SORBS3-214ENST00000522315 GRIN2BQ13224 1484 aa32.34■■■□□ 2.77
SORBS3-214ENST00000522315 MAGI1Q96QZ7 1491 aaPredicted RBP32.31■■■□□ 2.76
SORBS3-214ENST00000522315 ABCA5Q8WWZ7 1642 aa32.29■■■□□ 2.76
SORBS3-214ENST00000522315 ARAP1Q96P48 1450 aa32.29■■■□□ 2.76
SORBS3-214ENST00000522315 CLASP1Q7Z460 1538 aa32.27■■■□□ 2.76
SORBS3-214ENST00000522315 GAPVD1Q14C86 1478 aa32.27■■■□□ 2.76
SORBS3-214ENST00000522315 ABCA10Q8WWZ4 1543 aa32.26■■■□□ 2.76
SORBS3-214ENST00000522315 SYNJ1O43426 1573 aa32.26■■■□□ 2.75
SORBS3-214ENST00000522315 CYB5RLQ6IPT4 315 aa32.24■■■□□ 2.75
SORBS3-214ENST00000522315 CHMP7Q8WUX9 453 aaPredicted RBP32.22■■■□□ 2.75
SORBS3-214ENST00000522315 SYNJ2O15056 1496 aa32.22■■■□□ 2.75
SORBS3-214ENST00000522315 BIVM-ERCC5R4GMW8 1640 aa32.21■■■□□ 2.75
SORBS3-214ENST00000522315 TOP2BQ02880 1626 aa32.18■■■□□ 2.74
SORBS3-214ENST00000522315 WRNQ14191 1432 aaPredicted RBP eCLIP32.16■■■□□ 2.74
SORBS3-214ENST00000522315 ADAMTS12P58397 1594 aa32.05■■■□□ 2.72
SORBS3-214ENST00000522315 GRIN2AQ12879 1464 aa31.97■■■□□ 2.71
SORBS3-214ENST00000522315 CEP170Q5SW79 1584 aa31.94■■■□□ 2.7
SORBS3-214ENST00000522315 ERCC6L2Q5T890 1561 aa31.9■■■□□ 2.7
SORBS3-214ENST00000522315 ERICH3Q5RHP9 1530 aa31.84■■■□□ 2.69
SORBS3-214ENST00000522315 TRHP20396 242 aaPredicted RBP31.83■■■□□ 2.69
SORBS3-214ENST00000522315 FHAD1B1AJZ9 1412 aa31.83■■■□□ 2.69
SORBS3-214ENST00000522315 NUP160Q12769 1436 aa31.83■■■□□ 2.69
SORBS3-214ENST00000522315 SHROOM2Q13796 1616 aa31.71■■■□□ 2.67
SORBS3-214ENST00000522315 RUSC2Q8N2Y8 1516 aa31.6■■■□□ 2.65
SORBS3-214ENST00000522315 PRG4Q92954 1404 aaPredicted RBP31.52■■■□□ 2.64
SORBS3-214ENST00000522315 KIF27Q86VH2 1401 aa31.49■■■□□ 2.63
SORBS3-214ENST00000522315 IGF1RP08069 1367 aa31.46■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms