RNA–Protein interactions for RNA: ENST00000521787.5

SORBS3-212, Transcript of sorbin and SH3 domain containing 3, humanhuman

TSL 4

Gene SORBS3, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORBS3-212ENST00000521787 NISCHQ9Y2I1 1504 aa48.12■■■■■ 5.29
SORBS3-212ENST00000521787 CCDC180Q9P1Z9 1646 aa43.08■■■■■ 4.49
SORBS3-212ENST00000521787 ABCC9O60706 1549 aa42.1■■■■■ 4.33
SORBS3-212ENST00000521787 RB1CC1Q8TDY2 1594 aa40.55■■■■■ 4.08
SORBS3-212ENST00000521787 NACADO15069 1562 aa40.44■■■■■ 4.06
SORBS3-212ENST00000521787 MYO15BQ96JP2 1530 aa40.14■■■■■ 4.02
SORBS3-212ENST00000521787 ZCCHC6Q5VYS8 1495 aaKnown RBP40.07■■■■■ 4.01
SORBS3-212ENST00000521787 DCAF8L2P0C7V8 631 aa40.02■■■■■ 4
SORBS3-212ENST00000521787 DCAF1Q9Y4B6 1507 aa39.87■■■■□ 3.97
SORBS3-212ENST00000521787 UNC13AQ9UPW8 1703 aa39.8■■■■□ 3.96
SORBS3-212ENST00000521787 BICRAQ9NZM4 1560 aa39.3■■■■□ 3.88
SORBS3-212ENST00000521787 PABPN1Q86U42 306 aaKnown RBP eCLIP39.16■■■■□ 3.863e-8■■□□□ 12
SORBS3-212ENST00000521787 SCRIBQ14160 1630 aa39.14■■■■□ 3.86
SORBS3-212ENST00000521787 SHROOM4Q9ULL8 1493 aa38.94■■■■□ 3.82
SORBS3-212ENST00000521787 DNAJC5BQ9UF47 199 aa38.82■■■■□ 3.8
SORBS3-212ENST00000521787 EIF4G1Q04637 1599 aaKnown RBP38.28■■■■□ 3.72
SORBS3-212ENST00000521787 CC2D2AQ9P2K1 1620 aa38.19■■■■□ 3.7
SORBS3-212ENST00000521787 CECR2Q9BXF3 1484 aa37.88■■■■□ 3.65
SORBS3-212ENST00000521787 SMARCA4P51532 1647 aa37.47■■■■□ 3.59
SORBS3-212ENST00000521787 BAZ1AQ9NRL2 1556 aaPredicted RBP37.36■■■■□ 3.57
SORBS3-212ENST00000521787 SMARCA2P51531 1590 aa37.24■■■■□ 3.55
SORBS3-212ENST00000521787 NCAPD3P42695 1498 aa37.22■■■■□ 3.55
SORBS3-212ENST00000521787 ATAD2BQ9ULI0 1458 aa37.2■■■■□ 3.55
SORBS3-212ENST00000521787 HMGXB3Q12766 1538 aa37.14■■■■□ 3.54
SORBS3-212ENST00000521787 PEG3Q9GZU2 1588 aa37.12■■■■□ 3.53
SORBS3-212ENST00000521787 MROH2BQ7Z745 1585 aa37.04■■■■□ 3.52
SORBS3-212ENST00000521787 BAZ1BQ9UIG0 1483 aaKnown RBP36.92■■■■□ 3.5
SORBS3-212ENST00000521787 WIZO95785 1651 aa36.71■■■■□ 3.47
SORBS3-212ENST00000521787 RSF1Q96T23 1441 aaPredicted RBP36.5■■■■□ 3.43
SORBS3-212ENST00000521787 LAMC3Q9Y6N6 1575 aa36.4■■■■□ 3.42
SORBS3-212ENST00000521787 NESP48681 1621 aa36.37■■■■□ 3.41
SORBS3-212ENST00000521787 ERCC6Q03468 1493 aa36.34■■■■□ 3.41
SORBS3-212ENST00000521787 TOP2AP11388 1531 aaKnown RBP36.31■■■■□ 3.4
SORBS3-212ENST00000521787 DNAJC5Q9H3Z4 198 aa36.27■■■■□ 3.4
SORBS3-212ENST00000521787 KIF21AQ7Z4S6 1674 aa36.14■■■■□ 3.38
SORBS3-212ENST00000521787 CUX2O14529 1486 aa36.1■■■■□ 3.37
SORBS3-212ENST00000521787 CADPSQ9ULU8 1353 aa36.08■■■■□ 3.37
SORBS3-212ENST00000521787 THOC2Q8NI27 1593 aaKnown RBP36.04■■■■□ 3.36
SORBS3-212ENST00000521787 PDS5BQ9NTI5 1447 aa36.03■■■■□ 3.36
SORBS3-212ENST00000521787 PRDM2Q13029 1718 aa35.91■■■■□ 3.34
SORBS3-212ENST00000521787 CFTRP13569 1480 aa35.87■■■■□ 3.33
SORBS3-212ENST00000521787 CCDC88BA6NC98 1476 aa35.78■■■■□ 3.32
SORBS3-212ENST00000521787 CEP164Q9UPV0 1460 aa35.73■■■■□ 3.31
SORBS3-212ENST00000521787 FANCD2Q9BXW9 1451 aa35.72■■■■□ 3.31
SORBS3-212ENST00000521787 MRC2Q9UBG0 1479 aa35.72■■■■□ 3.31
SORBS3-212ENST00000521787 WDR62O43379 1518 aa35.67■■■■□ 3.3
SORBS3-212ENST00000521787 URB2Q14146 1524 aaKnown RBP35.38■■■■□ 3.25
SORBS3-212ENST00000521787 SUPT5HO00267 1087 aaKnown RBP35.25■■■■□ 3.23
SORBS3-212ENST00000521787 ABCC8Q09428 1581 aa35.15■■■■□ 3.22
SORBS3-212ENST00000521787 DNMBPQ6XZF7 1577 aa35.15■■■■□ 3.22
SORBS3-212ENST00000521787 TOPBP1Q92547 1522 aa35.14■■■■□ 3.22
SORBS3-212ENST00000521787 IFT140Q96RY7 1462 aa34.97■■■■□ 3.19
SORBS3-212ENST00000521787 TARBP1Q13395 1621 aaKnown RBP34.85■■■■□ 3.17
SORBS3-212ENST00000521787 POLA1P09884 1462 aaPredicted RBP34.83■■■■□ 3.17
SORBS3-212ENST00000521787 EIF4G3O43432 1585 aaKnown RBP34.79■■■■□ 3.16
SORBS3-212ENST00000521787 CUX1P39880 1505 aa34.79■■■■□ 3.16
SORBS3-212ENST00000521787 ZNF608Q9ULD9 1512 aaPredicted RBP34.78■■■■□ 3.16
SORBS3-212ENST00000521787 FGD5Q6ZNL6 1462 aa34.71■■■■□ 3.15
SORBS3-212ENST00000521787 WDR97A6NE52 1622 aa34.65■■■■□ 3.14
SORBS3-212ENST00000521787 RAD54L2Q9Y4B4 1467 aa34.6■■■■□ 3.13
SORBS3-212ENST00000521787 SOGA1O94964 1423 aa34.59■■■■□ 3.13
SORBS3-212ENST00000521787 BIVM-ERCC5R4GMW8 1640 aa34.57■■■■□ 3.12
SORBS3-212ENST00000521787 AQRO60306 1485 aaKnown RBP eCLIP34.52■■■■□ 3.126e-8■■■□□ 15.6
SORBS3-212ENST00000521787 TOP2BQ02880 1626 aa34.51■■■■□ 3.11
SORBS3-212ENST00000521787 CHD1O14646 1710 aa34.46■■■■□ 3.11
SORBS3-212ENST00000521787 SYNJ1O43426 1573 aa34.45■■■■□ 3.11
SORBS3-212ENST00000521787 WRNQ14191 1432 aaPredicted RBP eCLIP34.45■■■■□ 3.11
SORBS3-212ENST00000521787 PBRM1Q86U86 1689 aa34.4■■■■□ 3.1
SORBS3-212ENST00000521787 OSCARQ8IYS5 282 aa34.39■■■■□ 3.1
SORBS3-212ENST00000521787 TDRD9Q8NDG6 1382 aaKnown RBP34.38■■■■□ 3.09
SORBS3-212ENST00000521787 ABCA10Q8WWZ4 1543 aa34.37■■■■□ 3.09
SORBS3-212ENST00000521787 ABCA5Q8WWZ7 1642 aa34.35■■■■□ 3.09
SORBS3-212ENST00000521787 GRIN2BQ13224 1484 aa34.28■■■■□ 3.08
SORBS3-212ENST00000521787 SNAPC4Q5SXM2 1469 aa34.27■■■■□ 3.08
SORBS3-212ENST00000521787 TRIM41Q8WV44 630 aa34.27■■■■□ 3.08
SORBS3-212ENST00000521787 MAGI1Q96QZ7 1491 aaPredicted RBP34.27■■■■□ 3.08
SORBS3-212ENST00000521787 GAPVD1Q14C86 1478 aa34.26■■■■□ 3.07
SORBS3-212ENST00000521787 SYNJ2O15056 1496 aa34.11■■■■□ 3.05
SORBS3-212ENST00000521787 RIMBP3CA6NJZ7 1639 aa34.07■■■■□ 3.04
SORBS3-212ENST00000521787 RIMBP3BA6NNM3 1639 aa34.07■■■■□ 3.04
SORBS3-212ENST00000521787 RIMBP3Q9UFD9 1639 aa34.07■■■■□ 3.04
SORBS3-212ENST00000521787 FBLN2P98095 1184 aa34.06■■■■□ 3.04
SORBS3-212ENST00000521787 ADAMTS12P58397 1594 aa34.02■■■■□ 3.04
SORBS3-212ENST00000521787 ERICH3Q5RHP9 1530 aa33.99■■■■□ 3.03
SORBS3-212ENST00000521787 ARHGEF11O15085 1522 aa33.99■■■■□ 3.03
SORBS3-212ENST00000521787 CLASP1Q7Z460 1538 aa33.99■■■■□ 3.03
SORBS3-212ENST00000521787 CHMP7Q8WUX9 453 aaPredicted RBP33.97■■■■□ 3.03
SORBS3-212ENST00000521787 GRIN2AQ12879 1464 aa33.87■■■■□ 3.01
SORBS3-212ENST00000521787 FHAD1B1AJZ9 1412 aa33.84■■■■□ 3.01
SORBS3-212ENST00000521787 CEP170Q5SW79 1584 aa33.74■■■□□ 2.99
SORBS3-212ENST00000521787 KIF27Q86VH2 1401 aa33.74■■■□□ 2.99
SORBS3-212ENST00000521787 CUL7Q14999 1698 aa33.74■■■□□ 2.99
SORBS3-212ENST00000521787 NUP160Q12769 1436 aa33.71■■■□□ 2.99
SORBS3-212ENST00000521787 ARAP1Q96P48 1450 aa33.67■■■□□ 2.98
SORBS3-212ENST00000521787 SHROOM2Q13796 1616 aa33.61■■■□□ 2.97
SORBS3-212ENST00000521787 IGF1RP08069 1367 aa33.55■■■□□ 2.96
SORBS3-212ENST00000521787 RUSC2Q8N2Y8 1516 aa33.54■■■□□ 2.96
SORBS3-212ENST00000521787 CYB5RLQ6IPT4 315 aa33.49■■■□□ 2.95
SORBS3-212ENST00000521787 ERCC6L2Q5T890 1561 aa33.43■■■□□ 2.94
SORBS3-212ENST00000521787 CARMIL1Q5VZK9 1371 aa33.37■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms