RNA–Protein interactions for RNA: ENST00000445686.1

EDEM1-204, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 2 BASIC

Gene EDEM1, Length 1,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-204ENST00000445686 NISCHQ9Y2I1 1504 aa45.31■■■■■ 4.84
EDEM1-204ENST00000445686 CCDC180Q9P1Z9 1646 aa40.34■■■■■ 4.05
EDEM1-204ENST00000445686 ABCC9O60706 1549 aa39.59■■■■□ 3.93
EDEM1-204ENST00000445686 RB1CC1Q8TDY2 1594 aa38.06■■■■□ 3.68
EDEM1-204ENST00000445686 DCAF8L2P0C7V8 631 aa38.05■■■■□ 3.68
EDEM1-204ENST00000445686 NACADO15069 1562 aa37.98■■■■□ 3.67
EDEM1-204ENST00000445686 ZCCHC6Q5VYS8 1495 aaKnown RBP37.7■■■■□ 3.63
EDEM1-204ENST00000445686 MYO15BQ96JP2 1530 aa37.68■■■■□ 3.62
EDEM1-204ENST00000445686 DCAF1Q9Y4B6 1507 aa37.48■■■■□ 3.59
EDEM1-204ENST00000445686 UNC13AQ9UPW8 1703 aa37.13■■■■□ 3.53
EDEM1-204ENST00000445686 PABPN1Q86U42 306 aaKnown RBP eCLIP36.99■■■■□ 3.51
EDEM1-204ENST00000445686 SCRIBQ14160 1630 aa36.82■■■■□ 3.49
EDEM1-204ENST00000445686 BICRAQ9NZM4 1560 aa36.81■■■■□ 3.48
EDEM1-204ENST00000445686 SHROOM4Q9ULL8 1493 aa36.49■■■■□ 3.43
EDEM1-204ENST00000445686 DNAJC5BQ9UF47 199 aa36.35■■■■□ 3.41
EDEM1-204ENST00000445686 EIF4G1Q04637 1599 aaKnown RBP35.9■■■■□ 3.34
EDEM1-204ENST00000445686 CC2D2AQ9P2K1 1620 aa35.79■■■■□ 3.32
EDEM1-204ENST00000445686 CECR2Q9BXF3 1484 aa35.6■■■■□ 3.29
EDEM1-204ENST00000445686 SMARCA4P51532 1647 aa35.18■■■■□ 3.22
EDEM1-204ENST00000445686 BAZ1AQ9NRL2 1556 aaPredicted RBP35.17■■■■□ 3.22
EDEM1-204ENST00000445686 SMARCA2P51531 1590 aa35.02■■■■□ 3.2
EDEM1-204ENST00000445686 NCAPD3P42695 1498 aa35.01■■■■□ 3.2
EDEM1-204ENST00000445686 ATAD2BQ9ULI0 1458 aa35.01■■■■□ 3.2
EDEM1-204ENST00000445686 MROH2BQ7Z745 1585 aa34.91■■■■□ 3.18
EDEM1-204ENST00000445686 HMGXB3Q12766 1538 aa34.84■■■■□ 3.17
EDEM1-204ENST00000445686 PEG3Q9GZU2 1588 aa34.82■■■■□ 3.16
EDEM1-204ENST00000445686 BAZ1BQ9UIG0 1483 aaKnown RBP34.78■■■■□ 3.16
EDEM1-204ENST00000445686 WIZO95785 1651 aa34.54■■■■□ 3.12
EDEM1-204ENST00000445686 RSF1Q96T23 1441 aaPredicted RBP34.48■■■■□ 3.11
EDEM1-204ENST00000445686 ERCC6Q03468 1493 aa34.21■■■■□ 3.07
EDEM1-204ENST00000445686 NESP48681 1621 aa34.2■■■■□ 3.06
EDEM1-204ENST00000445686 TOP2AP11388 1531 aaKnown RBP34.18■■■■□ 3.06
EDEM1-204ENST00000445686 LAMC3Q9Y6N6 1575 aa34.13■■■■□ 3.05
EDEM1-204ENST00000445686 CADPSQ9ULU8 1353 aa34.02■■■■□ 3.04
EDEM1-204ENST00000445686 PDS5BQ9NTI5 1447 aa33.95■■■■□ 3.03
EDEM1-204ENST00000445686 CUX2O14529 1486 aa33.82■■■■□ 3
EDEM1-204ENST00000445686 KIF21AQ7Z4S6 1674 aa33.8■■■■□ 3
EDEM1-204ENST00000445686 CCDC88BA6NC98 1476 aa33.77■■■■□ 3
EDEM1-204ENST00000445686 CFTRP13569 1480 aa33.77■■■■□ 3
EDEM1-204ENST00000445686 THOC2Q8NI27 1593 aaKnown RBP33.68■■■□□ 2.98
EDEM1-204ENST00000445686 SUPT5HO00267 1087 aaKnown RBP33.64■■■□□ 2.98
EDEM1-204ENST00000445686 FANCD2Q9BXW9 1451 aa33.63■■■□□ 2.97
EDEM1-204ENST00000445686 CEP164Q9UPV0 1460 aa33.62■■■□□ 2.97
EDEM1-204ENST00000445686 MRC2Q9UBG0 1479 aa33.57■■■□□ 2.96
EDEM1-204ENST00000445686 PRDM2Q13029 1718 aa33.52■■■□□ 2.96
EDEM1-204ENST00000445686 WDR62O43379 1518 aa33.43■■■□□ 2.94
EDEM1-204ENST00000445686 URB2Q14146 1524 aaKnown RBP33.26■■■□□ 2.91
EDEM1-204ENST00000445686 ABCC8Q09428 1581 aa33.11■■■□□ 2.89
EDEM1-204ENST00000445686 TOPBP1Q92547 1522 aa33.06■■■□□ 2.88
EDEM1-204ENST00000445686 DNMBPQ6XZF7 1577 aa33.03■■■□□ 2.88
EDEM1-204ENST00000445686 IFT140Q96RY7 1462 aa32.91■■■□□ 2.86
EDEM1-204ENST00000445686 DNAJC5Q9H3Z4 198 aa32.89■■■□□ 2.86
EDEM1-204ENST00000445686 POLA1P09884 1462 aaPredicted RBP32.78■■■□□ 2.84
EDEM1-204ENST00000445686 CUX1P39880 1505 aa32.75■■■□□ 2.83
EDEM1-204ENST00000445686 ZNF608Q9ULD9 1512 aaPredicted RBP32.72■■■□□ 2.83
EDEM1-204ENST00000445686 FGD5Q6ZNL6 1462 aa32.69■■■□□ 2.82
EDEM1-204ENST00000445686 TARBP1Q13395 1621 aaKnown RBP32.68■■■□□ 2.82
EDEM1-204ENST00000445686 SOGA1O94964 1423 aa32.68■■■□□ 2.82
EDEM1-204ENST00000445686 RAD54L2Q9Y4B4 1467 aa32.62■■■□□ 2.81
EDEM1-204ENST00000445686 EIF4G3O43432 1585 aaKnown RBP32.61■■■□□ 2.81
EDEM1-204ENST00000445686 WRNQ14191 1432 aaPredicted RBP eCLIP32.56■■■□□ 2.8
EDEM1-204ENST00000445686 AQRO60306 1485 aaKnown RBP eCLIP32.55■■■□□ 2.85e-7■■■■□ 23.7
EDEM1-204ENST00000445686 TDRD9Q8NDG6 1382 aaKnown RBP32.5■■■□□ 2.79
EDEM1-204ENST00000445686 TOP2BQ02880 1626 aa32.47■■■□□ 2.79
EDEM1-204ENST00000445686 WDR97A6NE52 1622 aa32.46■■■□□ 2.79
EDEM1-204ENST00000445686 BIVM-ERCC5R4GMW8 1640 aa32.46■■■□□ 2.79
EDEM1-204ENST00000445686 OSCARQ8IYS5 282 aa32.45■■■□□ 2.79
EDEM1-204ENST00000445686 SYNJ1O43426 1573 aa32.44■■■□□ 2.78
EDEM1-204ENST00000445686 ABCA10Q8WWZ4 1543 aa32.36■■■□□ 2.77
EDEM1-204ENST00000445686 GRIN2BQ13224 1484 aa32.31■■■□□ 2.76
EDEM1-204ENST00000445686 FBLN2P98095 1184 aa32.3■■■□□ 2.76
EDEM1-204ENST00000445686 GAPVD1Q14C86 1478 aa32.29■■■□□ 2.76
EDEM1-204ENST00000445686 SNAPC4Q5SXM2 1469 aa32.25■■■□□ 2.75
EDEM1-204ENST00000445686 MAGI1Q96QZ7 1491 aaPredicted RBP32.23■■■□□ 2.75
EDEM1-204ENST00000445686 CHD1O14646 1710 aa32.23■■■□□ 2.75
EDEM1-204ENST00000445686 ABCA5Q8WWZ7 1642 aa32.22■■■□□ 2.75
EDEM1-204ENST00000445686 PBRM1Q86U86 1689 aa32.21■■■□□ 2.75
EDEM1-204ENST00000445686 CHMP7Q8WUX9 453 aaPredicted RBP32.17■■■□□ 2.74
EDEM1-204ENST00000445686 SYNJ2O15056 1496 aa32.1■■■□□ 2.73
EDEM1-204ENST00000445686 ERICH3Q5RHP9 1530 aa31.99■■■□□ 2.71
EDEM1-204ENST00000445686 ADAMTS12P58397 1594 aa31.94■■■□□ 2.7
EDEM1-204ENST00000445686 FHAD1B1AJZ9 1412 aa31.92■■■□□ 2.7
EDEM1-204ENST00000445686 KIF27Q86VH2 1401 aa31.92■■■□□ 2.7
EDEM1-204ENST00000445686 GRIN2AQ12879 1464 aa31.87■■■□□ 2.69
EDEM1-204ENST00000445686 RIMBP3CA6NJZ7 1639 aa31.87■■■□□ 2.69
EDEM1-204ENST00000445686 RIMBP3BA6NNM3 1639 aa31.87■■■□□ 2.69
EDEM1-204ENST00000445686 RIMBP3Q9UFD9 1639 aa31.87■■■□□ 2.69
EDEM1-204ENST00000445686 ARHGEF11O15085 1522 aa31.86■■■□□ 2.69
EDEM1-204ENST00000445686 TRIM41Q8WV44 630 aa31.84■■■□□ 2.69
EDEM1-204ENST00000445686 CLASP1Q7Z460 1538 aa31.84■■■□□ 2.69
EDEM1-204ENST00000445686 IGF1RP08069 1367 aa31.75■■■□□ 2.67
EDEM1-204ENST00000445686 NUP160Q12769 1436 aa31.7■■■□□ 2.67
EDEM1-204ENST00000445686 CUL7Q14999 1698 aa31.7■■■□□ 2.67
EDEM1-204ENST00000445686 CEP170Q5SW79 1584 aa31.68■■■□□ 2.66
EDEM1-204ENST00000445686 CYB5RLQ6IPT4 315 aa31.64■■■□□ 2.66
EDEM1-204ENST00000445686 CARMIL1Q5VZK9 1371 aa31.59■■■□□ 2.65
EDEM1-204ENST00000445686 ARAP1Q96P48 1450 aa31.57■■■□□ 2.64
EDEM1-204ENST00000445686 RUSC2Q8N2Y8 1516 aa31.5■■■□□ 2.63
EDEM1-204ENST00000445686 SHROOM2Q13796 1616 aa31.47■■■□□ 2.63
EDEM1-204ENST00000445686 JPH4Q96JJ6 628 aa31.44■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms