Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01554Q52M75 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC8.11□□□□□ -1.11
LINC01554Q52M75 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01554Q52M75 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01554Q52M75 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
LINC01554Q52M75 AC006116.8-202ENST00000587620 1550 ntBASIC8.11□□□□□ -1.11
LINC01554Q52M75 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01554Q52M75 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC8.11□□□□□ -1.11
LINC01554Q52M75 SHANK2-201ENST00000338508 7271 ntTSL 5 BASIC8.11□□□□□ -1.11
LINC01554Q52M75 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01554Q52M75 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC8.11□□□□□ -1.11
LINC01554Q52M75 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01554Q52M75 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01554Q52M75 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01554Q52M75 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01554Q52M75 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01554Q52M75 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC8.11□□□□□ -1.11
LINC01554Q52M75 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
LINC01554Q52M75 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01554Q52M75 KRT18P29-201ENST00000397031 1267 ntBASIC8.11□□□□□ -1.11
LINC01554Q52M75 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01554Q52M75 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
LINC01554Q52M75 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01554Q52M75 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
LINC01554Q52M75 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC8.11□□□□□ -1.11
LINC01554Q52M75 CD99P1-205ENST00000527459 561 ntBASIC8.11□□□□□ -1.11
LINC01554Q52M75 RNF121-214ENST00000533380 870 ntTSL 3 BASIC8.11□□□□□ -1.11
LINC01554Q52M75 RARRES2P10-201ENST00000564312 460 ntBASIC8.11□□□□□ -1.11
LINC01554Q52M75 PDXK-201ENST00000291565 7366 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01554Q52M75 KRT18P55-202ENST00000578578 1546 ntBASIC8.11□□□□□ -1.11
LINC01554Q52M75 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01554Q52M75 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01554Q52M75 AC013726.1-201ENST00000563747 2285 ntBASIC8.11□□□□□ -1.11
LINC01554Q52M75 ZEB1-AS1-208ENST00000607166 2503 ntBASIC8.11□□□□□ -1.11
LINC01554Q52M75 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC8.11□□□□□ -1.11
LINC01554Q52M75 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01554Q52M75 SEC14L1-204ENST00000436233 5295 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01554Q52M75 SERINC5-202ENST00000507668 6479 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
LINC01554Q52M75 LHX6-204ENST00000394319 3465 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01554Q52M75 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01554Q52M75 GREB1-201ENST00000234142 8444 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01554Q52M75 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01554Q52M75 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC8.11□□□□□ -1.11
LINC01554Q52M75 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01554Q52M75 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC8.11□□□□□ -1.11
LINC01554Q52M75 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC8.11□□□□□ -1.11
LINC01554Q52M75 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01554Q52M75 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01554Q52M75 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01554Q52M75 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01554Q52M75 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01554Q52M75 ABCA8-208ENST00000586539 5088 ntAPPRIS P4 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01554Q52M75 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01554Q52M75 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01554Q52M75 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
LINC01554Q52M75 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01554Q52M75 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01554Q52M75 MXRA5Y-201ENST00000420610 8000 ntBASIC8.11□□□□□ -1.11
LINC01554Q52M75 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
LINC01554Q52M75 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01554Q52M75 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01554Q52M75 MDGA1-207ENST00000505425 3021 ntTSL 5 BASIC8.11□□□□□ -1.11
LINC01554Q52M75 DNAL1-201ENST00000311089 2312 ntTSL 2 BASIC8.11□□□□□ -1.11
LINC01554Q52M75 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC8.11□□□□□ -1.11
LINC01554Q52M75 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01554Q52M75 PLEC-208ENST00000436759 14787 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01554Q52M75 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC8.1□□□□□ -1.11
LINC01554Q52M75 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01554Q52M75 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01554Q52M75 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01554Q52M75 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01554Q52M75 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01554Q52M75 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
LINC01554Q52M75 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
LINC01554Q52M75 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01554Q52M75 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01554Q52M75 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01554Q52M75 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC8.1□□□□□ -1.11
LINC01554Q52M75 NUTM2HP-201ENST00000442076 2498 ntBASIC8.1□□□□□ -1.11
LINC01554Q52M75 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01554Q52M75 CIT-203ENST00000392521 8708 ntAPPRIS ALT1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01554Q52M75 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01554Q52M75 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC8.1□□□□□ -1.11
LINC01554Q52M75 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01554Q52M75 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01554Q52M75 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC8.1□□□□□ -1.11
LINC01554Q52M75 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
LINC01554Q52M75 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01554Q52M75 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC8.1□□□□□ -1.11
LINC01554Q52M75 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01554Q52M75 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
LINC01554Q52M75 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01554Q52M75 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC8.1□□□□□ -1.11
LINC01554Q52M75 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01554Q52M75 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01554Q52M75 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
LINC01554Q52M75 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01554Q52M75 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC8.1□□□□□ -1.11
LINC01554Q52M75 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01554Q52M75 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms